Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0372341 Lupinus albus HOM05D004021 ORTHO05D003767 0.0e+00 1858.6 938 100.0
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 0.0e+00 1180.6 985 65.9
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 8.8e-203 711.4 562 67.4
Glyma.06G083500 Glycine max HOM05D004021 ORTHO05D003767 1.7e-150 537.7 1198 36.0
Glyma.04G081800 Glycine max HOM05D004021 ORTHO05D003767 8.7e-150 535.4 1197 36.2
Phvul.009G107600 Phaseolus vulgaris HOM05D004021 ORTHO05D003767 1.8e-139 501.1 1205 34.7
VMungo1309G0329 Vigna mungo HOM05D004021 ORTHO05D003767 3.4e-138 496.9 1211 34.6
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 2.2e-137 494.2 1195 33.4
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 1.6e-132 478.0 1209 34.7
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 1.4e-131 474.9 1202 34.2
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 3.5e-127 460.3 1194 33.1
Medtr3g110132 Medicago truncatula HOM05D004021 ORTHO05D003767 8.7e-126 455.7 1193 33.9
Psat5g022840 Pisum sativum HOM05D004021 ORTHO05D003767 4.3e-125 453.4 1182 32.4
TPR.G1392 Trifolium pratense HOM05D004021 ORTHO05D003767 4.1e-123 446.8 1182 33.5
Ca_15608_v3 Cicer arietinum L. HOM05D004021 ORTHO05D003767 2.0e-122 444.5 1145 33.9
Medtr3g110082 Medicago truncatula HOM05D004021 ORTHO05D003767 1.3e-121 441.8 1193 33.7
Lalb_Chr22g0352251 Lupinus albus HOM05D004021 ORTHO05D003767 1.9e-120 438.0 367 64.0
arahy.Tifrunner.gnm1.ann1.QM1LQ0 Arachis hypogaea HOM05D004021 ORTHO05D003767 1.6e-119 434.9 1201 33.0
Psat5g022920 Pisum sativum HOM05D004021 ORTHO05D003767 1.2e-114 418.7 1198 32.1
Lalb_Chr11g0064431 Lupinus albus HOM05D004021 ORTHO05D003767 3.2e-112 410.6 1131 31.3
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 4.7e-111 406.8 1110 32.2
Lalb_Chr14g0372311 Lupinus albus HOM05D004021 ORTHO05D003767 6.0e-58 230.3 914 29.0
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 8.9e-46 189.9 1103 24.8
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 9.6e-40 169.9 1017 23.0
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 3.2e-35 154.8 899 24.1
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 4.3e-32 144.4 915 23.1
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 2.8e-31 141.7 940 23.5
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 3.6e-31 141.4 997 21.8
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 6.9e-30 137.1 947 23.3
CsaV3_3G048630 Cucumis sativus L. HOM05D004021 ORTHO05D003767 1.7e-28 132.5 858 23.7
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 4.6e-26 124.4 1010 22.9
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 7.9e-26 123.6 1026 22.9
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 1.8e-25 122.5 1037 22.6
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 3.1e-22 111.7 854 22.0
TWI63G0612 Tripterygium wilfordii HOM05D004021 ORTHO05D003767 1.5e-21 109.4 874 22.7
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 7.6e-21 107.1 217 37.8
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 3.8e-20 104.8 199 33.2
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 5.5e-19 100.9 203 34.0
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.2e-18 99.8 203 33.0
Glyma.17G195000 Glycine max HOM05D004021 ORTHO05D003767 2.7e-18 98.6 294 29.3
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 2.7e-18 98.6 910 21.6
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 3.5e-18 98.2 218 33.5
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 3.5e-18 98.2 791 22.6
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 6.0e-18 97.4 1167 22.0
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 7.9e-18 97.1 232 32.3
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 1.0e-17 96.7 161 37.3
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.8e-17 95.9 199 33.2
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 5.1e-17 94.4 232 31.9
AT5G11530 Arabidopsis thaliana HOM05D004021 ORTHO05D003767 1.1e-16 93.2 1109 22.6
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 2.5e-16 92.0 199 35.7
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 4.3e-16 91.3 666 23.7
AL6G22200 Arabidopsis lyrata HOM05D004021 ORTHO05D003767 5.6e-16 90.9 1145 21.6
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 2.8e-15 88.6 195 35.9
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 4.8e-15 87.8 85 47.1
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 8.2e-15 87.0 97 42.3
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 1.8e-14 85.9 89 43.8
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 3.1e-14 85.1 1080 20.3
VMungo0647G2380 Vigna mungo HOM05D058389 ORTHO05D003767 6.9e-14 84.0 379 26.9
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 2.0e-13 82.4 214 26.6
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 2.6e-13 82.0 212 31.6
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 1.3e-12 79.7 1080 20.9
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 1.3e-12 79.7 85 44.7
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.3e-12 79.7 85 44.7
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.7e-12 79.3 85 44.7
Duzib168G2343 Durio zibethinus HOM05D004021 ORTHO05D003767 4.9e-12 77.8 902 19.8
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.9e-12 77.8 151 33.8
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 6.5e-12 77.4 1031 20.1
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 6.5e-12 77.4 165 31.5
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.1e-11 76.6 152 32.2
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.4e-11 76.3 151 31.8
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 1.9e-11 75.9 139 29.5
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 2.5e-11 75.5 86 40.7
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 2.5e-11 75.5 140 35.0
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 4.2e-11 74.7 1030 19.9
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 5.5e-11 74.3 624 23.6
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 5.5e-11 74.3 102 38.2
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 2.1e-10 72.4 82 37.8
Carub.0006s1000 Capsella rubella HOM05D004021 ORTHO05D003767 3.5e-10 71.6 967 21.8
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 4.6e-10 71.2 114 34.2
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 4.6e-10 71.2 84 41.7
SalBow4G0344 Salvia bowleyana HOM05D004021 ORTHO05D003767 4.6e-10 71.2 972 21.2
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 6.1e-10 70.9 91 41.8
Sp6g32070 Schrenkiella parvula HOM05D004021 ORTHO05D003767 6.1e-10 70.9 902 20.4
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 1.0e-09 70.1 149 29.5
BcaC03g13370 Brassica carinata HOM05D004021 ORTHO05D003767 1.0e-09 70.1 80 41.2
C02p05090 Brassica napus HOM05D004021 ORTHO05D003767 1.0e-09 70.1 80 41.2
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 1.0e-09 70.1 80 41.2
SHI18661 Sapria himalayana HOM05D004021 ORTHO05D003767 1.0e-09 70.1 950 21.5
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.3e-09 69.7 155 32.3
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 1.3e-09 69.7 95 35.8
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 1.8e-09 69.3 657 21.0
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 1.8e-09 69.3 88 40.9
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 1.8e-09 69.3 103 36.9
Aa31LG3G15670 Aethionema arabicum HOM05D004021 ORTHO05D003767 2.3e-09 68.9 158 31.6
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 2.3e-09 68.9 80 40.0
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 2.3e-09 68.9 80 40.0
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 3.9e-09 68.2 1046 20.1
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 5.1e-09 67.8 1064 20.5
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 5.1e-09 67.8 86 39.5
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 6.7e-09 67.4 157 28.0
CSS0003638 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 1.1e-08 66.6 502 22.7
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 1.1e-08 66.6 119 33.6
A06p36400 Brassica napus HOM05D004021 ORTHO05D003767 1.5e-08 66.2 111 31.5
BraA06t26563Z Brassica rapa HOM05D004021 ORTHO05D003767 1.5e-08 66.2 111 31.5
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 1.5e-08 66.2 78 38.5
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 1.9e-08 65.9 117 34.2
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 2.5e-08 65.5 120 30.8
THA.LOC104814779 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 2.5e-08 65.5 79 35.4
AUR62041723 Chenopodium quinoa HOM05D012164 ORTHO05D003767 3.3e-08 65.1 144 31.2
SEGI_07029 Sequoiadendron giganteum HOM05D004021 ORTHO05D003767 3.3e-08 65.1 94 34.0
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 7.4e-08 63.9 1013 20.0
Gohir.D07G026600 Gossypium hirsutum HOM05D004021 ORTHO05D003767 7.4e-08 63.9 164 29.9
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.3e-07 63.2 84 38.1
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 1.3e-07 63.2 473 24.1
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 1.6e-07 62.8 60 45.0
Lsat_1_v5_gn_6_64101 Lactuca sativa HOM05D004021 ORTHO05D003767 2.2e-07 62.4 76 40.8
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 2.2e-07 62.4 978 21.3
EL10Ac2g04051 Beta vulgaris HOM05D012164 ORTHO05D003767 2.8e-07 62.0 198 27.8
Thhalv10015703m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 2.8e-07 62.0 132 26.5
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 2.8e-07 62.0 92 37.0
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 2.8e-07 62.0 92 34.8
vmacro18883 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 2.8e-07 62.0 502 23.5
CARHR201690 Cardamine hirsuta HOM05D004021 ORTHO05D003767 3.7e-07 61.6 1110 19.5
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 3.7e-07 61.6 177 28.8
Hund03406 Selenicereus undatus HOM05D012164 ORTHO05D003767 3.7e-07 61.6 137 29.9
ATR0315G010 Amborella trichopoda HOM05D004021 ORTHO05D003767 4.8e-07 61.2 57 42.1
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 6.3e-07 60.8 144 30.6
SalBow1G4226 Salvia bowleyana HOM05D004021 ORTHO05D003767 8.2e-07 60.5 385 21.8
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 8.2e-07 60.5 84 32.1
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 1.1e-06 60.1 100 33.0
TAR626G0813 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.4e-06 59.7 90 34.4
Lj4g0005513 Lotus japonicus HOM05D032889 ORTHO05D003767 2.4e-06 58.9 188 30.3
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 2.4e-06 58.9 79 39.2
SEGI_37840 Sequoiadendron giganteum HOM05D028836 ORTHO05D003767 3.1e-06 58.5 59 45.8
HPP92_026866 Vanilla planifolia HOM05D004021 ORTHO05D003767 3.1e-06 58.5 61 41.0
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.1e-06 58.2 78 38.5
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 6.9e-06 57.4 658 19.5
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 9.0e-06 57.0 140 31.4
Hund19530 Selenicereus undatus HOM05D012164 ORTHO05D003767 9.0e-06 57.0 216 26.4


User provided reference genes

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