Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0372231 Lupinus albus HOM05D001791 ORTHO05D001787 2.1e-144 515.8 279 100.0
Lalb_Chr22g0352281 Lupinus albus HOM05D001791 ORTHO05D001787 4.3e-105 385.2 272 73.5
Ca_01276_v3 Cicer arietinum L. HOM05D001791 ORTHO05D001787 4.3e-89 332.0 266 69.2
Lj3g0024246 Lotus japonicus HOM05D001791 ORTHO05D001787 3.7e-88 328.9 252 71.8
VMungo1127G1325 Vigna mungo HOM05D001791 ORTHO05D001787 1.8e-87 326.6 250 68.0
Glyma.15G032100 Glycine max HOM05D001791 ORTHO05D001787 1.3e-85 320.5 254 69.7
Phvul.011G057000 Phaseolus vulgaris HOM05D001791 ORTHO05D001787 2.7e-83 312.8 252 65.9
Glyma.12G055100 Glycine max HOM05D001791 ORTHO05D001787 1.3e-82 310.5 251 65.7
Medtr4g066010 Medicago truncatula HOM05D001791 ORTHO05D001787 2.3e-82 309.7 252 65.9
Glyma.11G130700 Glycine max HOM05D001791 ORTHO05D001787 3.0e-82 309.3 250 64.8
VMungo1080G1551 Vigna mungo HOM05D001791 ORTHO05D001787 1.5e-81 307.0 251 66.1
Glyma.13G342300 Glycine max HOM05D001791 ORTHO05D001787 4.8e-80 302.0 256 67.6
CiPaw.13G164900 Carya illinoinensis HOM05D001791 ORTHO05D001787 1.8e-79 300.1 252 64.7
Lj3g0017840 Lotus japonicus HOM05D001791 ORTHO05D001787 1.2e-78 297.4 250 61.6
QL01p006043 Quercus lobata HOM05D001791 ORTHO05D001787 5.0e-77 292.0 251 63.3
Ca_20581_v3 Cicer arietinum L. HOM05D001791 ORTHO05D001787 5.5e-76 288.5 252 63.5
Haze_23063 Corylus avellana HOM05D001791 ORTHO05D001787 1.6e-75 287.0 253 63.2
Phvul.L011343 Phaseolus vulgaris HOM05D001791 ORTHO05D001787 1.6e-75 287.0 251 63.3
Psat5g288840 Pisum sativum HOM05D001791 ORTHO05D001787 6.1e-75 285.0 266 63.9
Cfa009712 Carpinus fangiana HOM05D001791 ORTHO05D001787 7.9e-75 284.6 254 63.8
Medtr2g098420 Medicago truncatula HOM05D001791 ORTHO05D001787 7.9e-75 284.6 263 63.9
Haze_23067 Corylus avellana HOM05D001791 ORTHO05D001787 1.8e-74 283.5 253 62.8
Duzib168G0080 Durio zibethinus HOM05D001791 ORTHO05D001787 1.8e-71 273.5 276 57.2
Psat7g213920 Pisum sativum HOM05D001791 ORTHO05D001787 1.8e-71 273.5 251 62.2
Potri.003G210200 Populus trichocarpa HOM05D001791 ORTHO05D001787 4.5e-70 268.9 252 59.1
FAN11G0364 Fragaria x ananassa HOM05D001791 ORTHO05D001787 1.0e-69 267.7 255 61.6
FAN16G2685 Fragaria x ananassa HOM05D001791 ORTHO05D001787 1.3e-69 267.3 254 61.8
Dinv36298 Davidia involucrata HOM05D001791 ORTHO05D001787 2.2e-69 266.5 252 57.1
Manes.06G168300 Manihot esculenta HOM05D001791 ORTHO05D001787 2.9e-69 266.2 247 59.1
FAN21G3989 Fragaria x ananassa HOM05D001791 ORTHO05D001787 5.0e-69 265.4 255 61.2
FvH4_3g43680 Fragaria vesca HOM05D001791 ORTHO05D001787 6.5e-69 265.0 253 61.3
GSVIVG01025319001 Vitis vinifera HOM05D001791 ORTHO05D001787 6.5e-69 265.0 252 57.9
Ciclev10014671m.g Citrus clementina HOM05D001791 ORTHO05D001787 1.1e-68 264.2 256 61.3
FAN25G1221 Fragaria x ananassa HOM05D001791 ORTHO05D001787 1.1e-68 264.2 254 61.0
Manes.14G013700 Manihot esculenta HOM05D001791 ORTHO05D001787 3.6e-67 259.2 251 55.0
Thecc.09G225300 Theobroma cacao HOM05D001791 ORTHO05D001787 7.9e-67 258.1 254 59.4
CSS0004813 Camellia sinensis var. sinensis HOM05D001791 ORTHO05D001787 3.0e-66 256.1 253 55.7
Eucgr.J00807 Eucalyptus grandis HOM05D001791 ORTHO05D001787 8.8e-66 254.6 252 56.3
Sabra03G0153200 Salix brachista HOM05D001791 ORTHO05D001787 5.7e-65 251.9 250 57.2
Cpa.g.sc84.96 Carica papaya HOM05D001791 ORTHO05D001787 9.7e-65 251.1 244 57.4
Lalb_Chr19g0138211 Lupinus albus HOM05D001791 ORTHO05D001787 1.7e-64 250.4 247 57.9
Duzib150G1592 Durio zibethinus HOM05D001791 ORTHO05D001787 3.1e-63 246.1 276 52.5
TPR.G6882 Trifolium pratense HOM05D001791 ORTHO05D001787 5.3e-63 245.4 196 69.4
ClCG02G023460 Citrullus lanatus HOM05D001791 ORTHO05D001787 1.3e-61 240.7 253 56.5
CsaV3_4G024040 Cucumis sativus L. HOM05D001791 ORTHO05D001787 1.3e-61 240.7 253 56.9
Gorai.009G071800 Gossypium raimondii HOM05D001791 ORTHO05D001787 2.5e-60 236.5 252 55.6
Sed0002799 Sechium edule HOM05D001791 ORTHO05D001787 5.5e-60 235.3 249 55.0
Gohir.D05G070800 Gossypium hirsutum HOM05D001791 ORTHO05D001787 7.2e-60 235.0 252 55.2
Potri.001G016600 Populus trichocarpa HOM05D001791 ORTHO05D001787 1.2e-59 234.2 252 53.2
PGR119G1033 Punica granatum HOM05D001791 ORTHO05D001787 1.2e-59 234.2 270 51.5
TWI32G1235 Tripterygium wilfordii HOM05D001791 ORTHO05D001787 1.2e-59 234.2 254 52.0
Sabra01G0011700 Salix brachista HOM05D001791 ORTHO05D001787 1.6e-59 233.8 252 52.8
CiPaw.14G123200 Carya illinoinensis HOM05D001791 ORTHO05D001787 4.7e-59 232.3 252 54.4
MELO3C014619.2 Cucumis melo HOM05D001791 ORTHO05D001787 6.1e-59 231.9 253 54.9
Gohir.A05G067800 Gossypium hirsutum HOM05D001791 ORTHO05D001787 6.1e-59 231.9 252 54.4
Gorai.004G091800 Gossypium raimondii HOM05D001791 ORTHO05D001787 6.1e-59 231.9 254 53.9
TAR623G0151 Trochodendron aralioides HOM05D001791 ORTHO05D001787 1.0e-58 231.1 253 52.6
TAR636G0679 Trochodendron aralioides HOM05D001791 ORTHO05D001787 1.0e-58 231.1 255 54.1
Gohir.A08G081000 Gossypium hirsutum HOM05D001791 ORTHO05D001787 1.8e-58 230.3 254 52.8
Gohir.D08G087100 Gossypium hirsutum HOM05D001791 ORTHO05D001787 1.8e-58 230.3 254 53.1
TWI34G1062 Tripterygium wilfordii HOM05D001791 ORTHO05D001787 6.7e-58 228.4 253 51.4
Sed0005661 Sechium edule HOM05D001791 ORTHO05D001787 1.5e-57 227.3 249 53.0
Actinidia39385 Actinidia chinensis HOM05D001791 ORTHO05D001787 3.7e-56 222.6 251 51.0
CANSAT78G1004 Cannabis sativa HOM05D001791 ORTHO05D001787 4.8e-56 222.2 273 52.7
Actinidia06327 Actinidia chinensis HOM05D001791 ORTHO05D001787 6.3e-56 221.9 243 53.5
Hund07544 Selenicereus undatus HOM05D001791 ORTHO05D001787 1.0e-53 214.5 254 50.0
Rhsim01G0189700 Rhododendron simsii HOM05D001791 ORTHO05D001787 2.2e-53 213.4 257 52.5
Nitab4.5_0003250g0010 Nicotiana tabacum HOM05D001791 ORTHO05D001787 8.5e-53 211.5 260 50.4
vmacro12712 Vaccinium macrocarpon HOM05D001791 ORTHO05D001787 1.9e-52 210.3 252 52.0
Nn2g15529 Nelumbo nucifera HOM05D001791 ORTHO05D001787 9.4e-52 208.0 249 50.6
Peaxi162Scf00559g00028 Petunia axillaris HOM05D001791 ORTHO05D001787 9.4e-52 208.0 256 51.2
TAR633G1348 Trochodendron aralioides HOM05D001791 ORTHO05D001787 2.7e-51 206.5 251 51.0
Dinv08047 Davidia involucrata HOM05D001791 ORTHO05D001787 6.1e-51 205.3 252 51.2
MSTRG.18407 Avicennia marina HOM05D001791 ORTHO05D001787 1.4e-50 204.1 249 48.2
Cc00_g08670 Coffea canephora HOM05D001791 ORTHO05D001787 1.4e-50 204.1 258 50.4
Nitab4.5_0000175g0110 Nicotiana tabacum HOM05D001791 ORTHO05D001787 3.0e-50 203.0 257 50.6
Oeu055813.1 Olea europaea HOM05D001791 ORTHO05D001787 4.0e-50 202.6 254 49.6
Lsat_1_v5_gn_6_50040 Lactuca sativa HOM05D001791 ORTHO05D001787 5.2e-50 202.2 257 49.8
arahy.Tifrunner.gnm1.ann1.KHE3JK Arachis hypogaea HOM05D001791 ORTHO05D001787 2.6e-49 199.9 218 53.7
arahy.Tifrunner.gnm1.ann1.3G8GKP Arachis hypogaea HOM05D001791 ORTHO05D001787 3.4e-49 199.5 218 54.1
Nn7g36077 Nelumbo nucifera HOM05D001791 ORTHO05D001787 5.7e-49 198.7 260 46.9
DCAR_002042 Daucus carota HOM05D001791 ORTHO05D001787 9.8e-49 198.0 254 48.0
MBI01_g05107_MAGBIO Magnolia biondii HOM05D001791 ORTHO05D001787 2.8e-48 196.4 256 48.4
Lalb_Chr03g0026211 Lupinus albus HOM05D001791 ORTHO05D001787 4.8e-48 195.7 214 52.8
Nitab4.5_0010714g0010 Nicotiana tabacum HOM05D001791 ORTHO05D001787 4.8e-48 195.7 260 50.8
MSTRG.12481 Avicennia marina HOM05D001791 ORTHO05D001787 3.1e-47 193.0 250 48.0
Sopen01g002680 Solanum pennellii HOM05D001791 ORTHO05D001787 3.1e-47 193.0 264 47.0
ECA233G3770 Erigeron canadensis HOM05D001791 ORTHO05D001787 9.1e-47 191.4 266 47.0
Nitab4.5_0003069g0030 Nicotiana tabacum HOM05D001791 ORTHO05D001787 1.2e-46 191.0 259 49.8
Peaxi162Scf00773g00010 Petunia axillaris HOM05D001791 ORTHO05D001787 3.5e-46 189.5 254 48.0
Lju1319A2T34 Lonicera japonica HOM05D001791 ORTHO05D001787 1.7e-45 187.2 252 51.6
arahy.Tifrunner.gnm1.ann1.EP2IUT Arachis hypogaea HOM05D001791 ORTHO05D001787 2.9e-45 186.4 172 59.3
TWI60G1441 Tripterygium wilfordii HOM05D001791 ORTHO05D001787 3.8e-45 186.0 251 47.0
EL10Ac4g10312 Beta vulgaris HOM05D001791 ORTHO05D001787 6.5e-45 185.3 268 46.6
PGSC0003DMG400021345 Solanum tuberosum HOM05D001791 ORTHO05D001787 6.5e-45 185.3 263 45.6
RcHm_v2.0_Chr5g0078341 Rosa chinensis HOM05D001791 ORTHO05D001787 3.2e-44 183.0 254 48.4
MBI04_g47238_MAGBIO Magnolia biondii HOM05D001791 ORTHO05D001787 2.1e-43 180.3 251 47.0
Solyc01g014105.1 Solanum lycopersicum HOM05D001791 ORTHO05D001787 2.8e-43 179.9 255 47.5
Rhsim13G0224900 Rhododendron simsii HOM05D001791 ORTHO05D001787 3.6e-43 179.5 255 45.9
PGSC0003DMG400031868 Solanum tuberosum HOM05D001791 ORTHO05D001787 3.6e-43 179.5 259 46.7
Solyc01g014373.1 Solanum lycopersicum HOM05D001791 ORTHO05D001787 2.3e-42 176.8 256 46.5
TPR.G19643 Trifolium pratense HOM05D001791 ORTHO05D001787 4.0e-42 176.0 166 60.2
Ah.06g193540 Amaranthus hybridus HOM05D001791 ORTHO05D001787 8.8e-42 174.9 263 46.4
HanXRQChr13g0403911 Helianthus annuus HOM05D001791 ORTHO05D001787 2.6e-41 173.3 261 45.6
PSO339G5878 Papaver somniferum HOM05D001791 ORTHO05D001787 2.6e-41 173.3 269 43.9
Migut.N02296 Erythranthe guttata HOM05D001791 ORTHO05D001787 4.4e-41 172.6 262 43.5
arahy.Tifrunner.gnm1.ann1.2MPK67 Arachis hypogaea HOM05D001791 ORTHO05D001787 5.7e-41 172.2 166 57.2
Sc06g0004460 Simmondsia chinensis HOM05D001791 ORTHO05D001787 9.8e-41 171.4 255 47.1
PSO384G5044 Papaver somniferum HOM05D001791 ORTHO05D001787 1.7e-40 170.6 269 43.1
Aqoxy1G00208 Aquilegia oxysepala HOM05D001791 ORTHO05D001787 2.2e-40 170.2 260 42.7
Sopen01g008640 Solanum pennellii HOM05D001791 ORTHO05D001787 2.8e-40 169.9 257 44.4
MBI04_g14268_MAGBIO Magnolia biondii HOM05D001791 ORTHO05D001787 1.5e-36 157.5 227 47.1
Oeu043304.1 Olea europaea HOM05D001791 ORTHO05D001787 1.6e-35 154.1 254 40.9
Hund22075 Selenicereus undatus HOM05D001791 ORTHO05D001787 2.1e-35 153.7 255 42.4
vmacro04175 Vaccinium macrocarpon HOM05D001791 ORTHO05D001787 3.6e-35 152.9 195 50.3
CSS0037019 Camellia sinensis var. sinensis HOM05D001791 ORTHO05D001787 3.4e-33 146.4 265 42.6
THA.LOC104811156 Tarenaya hassleriana HOM05D001791 ORTHO05D001787 3.4e-33 146.4 254 41.7
AUR62000083 Chenopodium quinoa HOM05D001791 ORTHO05D001787 5.4e-31 139.0 195 47.2
SalBow2G0139 Salvia bowleyana HOM05D001791 ORTHO05D001787 1.2e-30 137.9 220 42.7
CAN.G388.53 Capsicum annuum HOM05D001791 ORTHO05D001787 3.0e-29 133.3 200 43.5
SalBow1G4538 Salvia bowleyana HOM05D001791 ORTHO05D001787 3.3e-28 129.8 249 39.4
SGA_v2.0_scaffold3G01548 Striga asiatica HOM05D001791 ORTHO05D001787 7.3e-28 128.6 258 40.7
unitig_699.g19124 Utricularia gibba HOM05D001791 ORTHO05D001787 2.1e-27 127.1 249 38.2
MBI01_g41294_MAGBIO Magnolia biondii HOM05D001791 ORTHO05D001787 6.2e-27 125.6 153 47.7
CARHR200540 Cardamine hirsuta HOM05D001791 ORTHO05D001787 1.2e-25 121.3 262 37.4
Carub.0006s1109 Capsella rubella HOM05D001791 ORTHO05D001787 5.8e-25 119.0 261 36.4
ATR0605G257 Amborella trichopoda HOM05D001791 ORTHO05D001787 9.8e-25 118.2 251 36.3
AUR62001300 Chenopodium quinoa HOM05D001791 ORTHO05D001787 1.3e-24 117.9 204 42.2
HanXRQChr02g0056501 Helianthus annuus HOM05D001791 ORTHO05D001787 1.3e-24 117.9 256 39.5
SEGI_00940 Sequoiadendron giganteum HOM05D001791 ORTHO05D001787 1.4e-23 114.4 242 37.6
Thhalv10013095m.g Eutrema salsugineum HOM05D001791 ORTHO05D001787 7.0e-23 112.1 264 36.4
Sp6g31060 Schrenkiella parvula HOM05D001791 ORTHO05D001787 9.2e-23 111.7 262 35.9
AL6G23460 Arabidopsis lyrata HOM05D001791 ORTHO05D001787 1.2e-22 111.3 257 36.2
Aa31LG3G14710 Aethionema arabicum HOM05D001791 ORTHO05D001787 2.7e-22 110.2 257 36.6
AUR62019255 Chenopodium quinoa HOM05D001791 ORTHO05D001787 2.7e-22 110.2 126 50.8
AUR62043681 Chenopodium quinoa HOM05D001791 ORTHO05D001787 2.7e-22 110.2 126 50.8
AT5G12900 Arabidopsis thaliana HOM05D001791 ORTHO05D001787 4.6e-22 109.4 255 36.1
BcaC04g19168 Brassica carinata HOM05D001791 ORTHO05D001787 6.0e-22 109.0 260 36.9
C09p64270 Brassica napus HOM05D001791 ORTHO05D001787 6.0e-22 109.0 260 36.9
BolC9t59264H Brassica oleracea HOM05D001791 ORTHO05D001787 6.0e-22 109.0 260 36.9
A10p25250 Brassica napus HOM05D001791 ORTHO05D001787 7.8e-22 108.6 262 36.6
BraA10t44588Z Brassica rapa HOM05D001791 ORTHO05D001787 7.8e-22 108.6 262 37.4
BcaB08g37020 Brassica carinata HOM05D001791 ORTHO05D001787 2.3e-21 107.1 261 36.0
HPP92_018946 Vanilla planifolia HOM05D001791 ORTHO05D001787 1.5e-20 104.4 258 33.3
Sc09g0000490 Simmondsia chinensis HOM05D001791 ORTHO05D001787 1.9e-20 104.0 252 35.3
Os08g0508100 Oryza sativa ssp. japonica HOM05D001791 ORTHO05D001787 7.3e-20 102.1 272 29.8
CDE05G2559 Ceratophyllum demersum HOM05D001791 ORTHO05D001787 1.3e-16 91.3 227 28.6
BcaNung03604 Brassica carinata HOM05D001791 ORTHO05D001787 2.9e-16 90.1 258 32.6
Zm00001eb199840 Zea mays HOM05D001791 ORTHO05D001787 8.3e-16 88.6 273 28.2
MD11G1021700 Malus domestica HOM05D001791 ORTHO05D001787 5.4e-15 85.9 62 67.7
MD00G1200200 Malus domestica HOM05D001791 ORTHO05D001787 7.1e-15 85.5 58 74.1
BolC3t13170H Brassica oleracea HOM05D001791 ORTHO05D001787 2.7e-14 83.6 249 33.7
A03p05680 Brassica napus HOM05D001791 ORTHO05D001787 4.6e-14 82.8 266 31.6
BraA03t09907Z Brassica rapa HOM05D001791 ORTHO05D001787 4.6e-14 82.8 266 31.6
TPR.G13658 Trifolium pratense HOM05D001791 ORTHO05D001787 4.6e-14 82.8 62 66.1
TPR.G11404 Trifolium pratense HOM05D001791 ORTHO05D001787 6.0e-14 82.4 79 63.3
C03p06640 Brassica napus HOM05D001791 ORTHO05D001787 3.0e-13 80.1 253 32.4
A02p01570 Brassica napus HOM05D001791 ORTHO05D001787 7.3e-12 75.5 250 32.4
Migut.D00563 Erythranthe guttata HOM05D001791 ORTHO05D001787 2.8e-11 73.6 228 32.5
BraA02t05137Z Brassica rapa HOM05D001791 ORTHO05D001787 3.6e-11 73.2 250 32.0
Oeu035707.1 Olea europaea HOM05D001791 ORTHO05D001787 1.8e-10 70.9 78 50.0
BcaNung01187 Brassica carinata HOM05D001791 ORTHO05D001787 4.0e-10 69.7 250 31.2
C02p05790 Brassica napus HOM05D001791 ORTHO05D001787 4.0e-10 69.7 250 31.2
BolC2t06524H Brassica oleracea HOM05D001791 ORTHO05D001787 4.0e-10 69.7 250 31.2
MBI01_g41293_MAGBIO Magnolia biondii HOM05D001791 ORTHO05D001787 2.0e-09 67.4 59 66.1
Zm00001eb316710 Zea mays HOM05D001791 ORTHO05D001787 4.4e-09 66.2 261 28.4
Zm00001eb034970 Zea mays HOM05D001791 ORTHO05D001787 3.5e-06 56.6 90 37.8


User provided reference genes

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