Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0372021 Lupinus albus HOM05D008943 ORTHO05D010477 1.9e-65 252.3 120 100.0
Lj3g0017475 Lotus japonicus HOM05D008943 ORTHO05D010477 7.2e-33 144.1 129 63.6
Lj3g0000367 Lotus japonicus HOM05D008943 ORTHO05D010477 1.6e-32 142.9 130 63.8
Glyma.15G035400 Glycine max HOM05D008943 ORTHO05D010477 3.9e-31 138.3 129 58.1
Glyma.13G338900 Glycine max HOM05D008943 ORTHO05D010477 3.1e-28 128.6 127 59.8
TPR.G6894 Trifolium pratense HOM05D008943 ORTHO05D010477 4.5e-27 124.8 127 54.3
Medtr2g097730 Medicago truncatula HOM05D008943 ORTHO05D010477 4.2e-25 118.2 124 51.6
Phvul.L008143 Phaseolus vulgaris HOM05D008943 ORTHO05D010477 1.0e-23 113.6 124 54.0
VMungo1080G1120 Vigna mungo HOM05D008943 ORTHO05D010477 9.7e-22 107.1 129 49.6
TPR.G23615 Trifolium pratense HOM05D029454 ORTHO05D010477 3.6e-16 88.6 131 43.5
CiPaw.14G065200 Carya illinoinensis HOM05D008943 ORTHO05D010477 1.4e-15 86.7 139 39.6
TPR.G238 Trifolium pratense HOM05D029454 ORTHO05D010477 1.8e-15 86.3 131 42.0
Haze_24168 Corylus avellana HOM05D008943 ORTHO05D010477 2.3e-15 85.9 116 44.8
Haze_24173 Corylus avellana HOM05D008943 ORTHO05D010477 2.3e-15 85.9 116 44.8
FvH4_3g36931 Fragaria vesca HOM05D008943 ORTHO05D010477 4.0e-15 85.1 122 39.3
Prupe.6G070600 Prunus persica HOM05D008943 ORTHO05D010477 2.0e-14 82.8 117 41.0
Cfa011556 Carpinus fangiana HOM05D008943 ORTHO05D010477 1.7e-13 79.7 116 40.5
QL01p029253 Quercus lobata HOM05D008943 ORTHO05D010477 3.7e-13 78.6 112 44.6
CiPaw.13G089400 Carya illinoinensis HOM05D008943 ORTHO05D010477 1.1e-12 77.0 130 40.0
RcHm_v2.0_Chr5g0066341 Rosa chinensis HOM05D008943 ORTHO05D010477 2.4e-12 75.9 114 36.8
TWI79G1516 Tripterygium wilfordii HOM05D008943 ORTHO05D010477 7.0e-12 74.3 124 42.7
Thecc.09G315700 Theobroma cacao HOM05D014101 ORTHO05D010477 1.0e-10 70.5 138 35.5
TWI31G0177 Tripterygium wilfordii HOM05D008943 ORTHO05D010477 3.8e-10 68.6 111 39.6
ECA247G2559 Erigeron canadensis HOM05D008943 ORTHO05D010477 5.0e-10 68.2 112 39.3
Nn2g11207 Nelumbo nucifera HOM05D008943 ORTHO05D010477 6.6e-10 67.8 107 40.2
Medtr4g064870 Medicago truncatula HOM05D029454 ORTHO05D010477 8.6e-10 67.4 81 54.3
Duzib168G0546 Durio zibethinus HOM05D014101 ORTHO05D010477 1.5e-09 66.6 139 36.7
Lsat_1_v5_gn_9_24780 Lactuca sativa HOM05D008943 ORTHO05D010477 3.3e-09 65.5 129 38.0
CANSAT54G0610 Cannabis sativa HOM05D008943 ORTHO05D010477 4.2e-09 65.1 156 32.1
Peaxi162Scf00481g00035 Petunia axillaris HOM05D018880 ORTHO05D010477 5.5e-09 64.7 128 37.5
Cc01_g13330 Coffea canephora HOM05D008943 ORTHO05D010477 1.2e-08 63.5 139 34.5
Nitab4.5_0000463g0120 Nicotiana tabacum HOM05D018880 ORTHO05D010477 2.1e-08 62.8 123 36.6
Sopen06g032790 Solanum pennellii HOM05D018880 ORTHO05D010477 2.1e-08 62.8 118 37.3
Nitab4.5_0006916g0040 Nicotiana tabacum HOM05D018880 ORTHO05D010477 1.0e-07 60.5 125 36.8
MELO3C025891.2 Cucumis melo HOM05D008943 ORTHO05D010477 1.4e-07 60.1 110 39.1
Sabra09G0025900 Salix brachista HOM05D008943 ORTHO05D010477 1.8e-07 59.7 116 37.1
ClCG02G019900 Citrullus lanatus HOM05D008943 ORTHO05D010477 4.0e-07 58.5 115 38.3
CsaV3_7G010000 Cucumis sativus L. HOM05D008943 ORTHO05D010477 8.9e-07 57.4 108 40.7
PGSC0003DMG400030330 Solanum tuberosum HOM05D018880 ORTHO05D010477 8.9e-07 57.4 123 37.4
Manes.01G169500 Manihot esculenta HOM05D008943 ORTHO05D010477 1.2e-06 57.0 121 38.8
Potri.009G036600 Populus trichocarpa HOM05D008943 ORTHO05D010477 2.0e-06 56.2 118 34.7
A10p06000 Brassica napus HOM05D010249 ORTHO05D012412 3.4e-06 55.5 131 33.6
Oeu054839.1 Olea europaea HOM05D008943 ORTHO05D010477 4.4e-06 55.1 106 34.9
Ciclev10030147m.g Citrus clementina HOM05D008943 ORTHO05D010477 5.7e-06 54.7 119 36.1
BraA10t42862Z Brassica rapa HOM05D010249 ORTHO05D012412 7.5e-06 54.3 131 33.6


User provided reference genes

Program Settings