Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0371911 Lupinus albus HOM05D008202 ORTHO05D010302 4.8e-70 267.7 134 100.0
Psat1g048280 Pisum sativum HOM05D008202 ORTHO05D010302 1.4e-13 80.1 88 50.0
EL10Ac8g18376 Beta vulgaris HOM05D008202 ORTHO05D010302 2.7e-12 75.9 89 50.6
Dinv42250 Davidia involucrata HOM05D008202 ORTHO05D010302 6.6e-11 71.2 93 51.6
Medtr6g088800 Medicago truncatula HOM05D008202 ORTHO05D010302 8.6e-11 70.9 82 46.3
Manes.03G026600 Manihot esculenta HOM05D008202 ORTHO05D010302 1.1e-10 70.5 92 45.7
Dinv36682 Davidia involucrata HOM05D008202 ORTHO05D010302 1.9e-10 69.7 62 58.1
AUR62010887 Chenopodium quinoa HOM05D008202 ORTHO05D010302 2.5e-10 69.3 85 45.9
Manes.04G125801 Manihot esculenta HOM05D008202 ORTHO05D010302 3.3e-10 68.9 58 58.6
Manes.13G078801 Manihot esculenta HOM05D008202 ORTHO05D010302 3.3e-10 68.9 58 58.6
Thecc.09G099700 Theobroma cacao HOM05D008202 ORTHO05D010302 5.6e-10 68.2 91 45.1
Sc18g0001520 Simmondsia chinensis HOM05D008202 ORTHO05D010302 7.3e-10 67.8 93 48.4
Actinidia17520 Actinidia chinensis HOM05D008202 ORTHO05D010302 1.2e-09 67.0 93 43.0
Ah.14g083220 Amaranthus hybridus HOM05D008202 ORTHO05D010302 1.2e-09 67.0 89 43.8
AUR62021399 Chenopodium quinoa HOM05D008202 ORTHO05D010302 1.6e-09 66.6 85 45.9
CSS0001567 Camellia sinensis var. sinensis HOM05D008202 ORTHO05D010302 2.1e-09 66.2 93 41.9
Ciclev10010342m.g Citrus clementina HOM05D008202 ORTHO05D010302 2.1e-09 66.2 65 52.3
Cc06_g10540 Coffea canephora HOM05D008202 ORTHO05D010302 2.1e-09 66.2 92 45.7
Peaxi162Scf00720g00418 Petunia axillaris HOM05D008202 ORTHO05D010302 2.8e-09 65.9 56 58.9
Rhsim05G0039400 Rhododendron simsii HOM05D008202 ORTHO05D010302 4.7e-09 65.1 70 47.1
TWI63G1052 Tripterygium wilfordii HOM05D008202 ORTHO05D010302 4.7e-09 65.1 91 44.0
CiPaw.04G157000 Carya illinoinensis HOM05D008202 ORTHO05D010302 6.2e-09 64.7 49 65.3
Migut.K00545 Erythranthe guttata HOM05D008202 ORTHO05D010302 6.2e-09 64.7 49 65.3
HanXRQChr12g0358111 Helianthus annuus HOM05D008202 ORTHO05D010302 6.2e-09 64.7 65 55.4
PGSC0003DMG400046448 Solanum tuberosum HOM05D001685 ORTHO05D006653 6.2e-09 64.7 107 36.4
Solyc04g058130.3 Solanum lycopersicum HOM05D008202 ORTHO05D010302 8.1e-09 64.3 84 42.9
SGA_v2.0_scaffold512G52633 Striga asiatica HOM05D008202 ORTHO05D010302 8.1e-09 64.3 61 50.8
vmacro10849 Vaccinium macrocarpon HOM05D008202 ORTHO05D010302 8.1e-09 64.3 69 49.3
Haze_25829 Corylus avellana HOM05D008202 ORTHO05D010302 1.4e-08 63.5 57 57.9
DCAR_028656 Daucus carota HOM05D008202 ORTHO05D010302 1.4e-08 63.5 95 40.0
Ah.14g082540 Amaranthus hybridus HOM05D008202 ORTHO05D010302 1.8e-08 63.2 72 45.8
Actinidia39781 Actinidia chinensis HOM05D008202 ORTHO05D010302 2.4e-08 62.8 92 44.6
Hma1.2p1_0386F.1_g141760 Hydrangea macrophylla HOM05D008202 ORTHO05D010302 2.4e-08 62.8 92 45.7
GSVIVG01015295001 Vitis vinifera HOM05D008202 ORTHO05D010302 2.4e-08 62.8 91 36.3
CiPaw.04G155900 Carya illinoinensis HOM05D008202 ORTHO05D010302 3.1e-08 62.4 49 63.3
COL.COLO4_34733 Corchorus olitorius HOM05D008202 ORTHO05D010302 4.0e-08 62.0 54 59.3
Gohir.A06G067500 Gossypium hirsutum HOM05D008202 ORTHO05D010302 5.2e-08 61.6 51 54.9
Lsat_1_v5_gn_8_98261 Lactuca sativa HOM05D008202 ORTHO05D010302 5.2e-08 61.6 113 39.8
Oeu018577.1 Olea europaea HOM05D008202 ORTHO05D010302 5.2e-08 61.6 87 40.2
MD02G1066600 Malus domestica HOM05D008202 ORTHO05D010302 6.8e-08 61.2 93 43.0
Atru.chr7.1471 Acer truncatum HOM05D008202 ORTHO05D010302 8.9e-08 60.8 87 43.7
MSTRG.19550 Avicennia marina HOM05D008202 ORTHO05D010302 8.9e-08 60.8 92 40.2
Ciclev10027039m.g Citrus clementina HOM05D008202 ORTHO05D010302 8.9e-08 60.8 81 44.4
CDE08G1102 Ceratophyllum demersum HOM05D008202 ORTHO05D010302 1.2e-07 60.5 92 40.2
FAN23G0175 Fragaria x ananassa HOM05D008202 ORTHO05D010302 1.2e-07 60.5 83 45.8
Prupe.7G218700 Prunus persica HOM05D008202 ORTHO05D010302 1.2e-07 60.5 68 48.5
Gorai.010G077500 Gossypium raimondii HOM05D008202 ORTHO05D010302 1.5e-07 60.1 92 42.4
Ciclev10027258m.g Citrus clementina HOM05D008202 ORTHO05D010302 2.6e-07 59.3 49 57.1
FAN26G0167 Fragaria x ananassa HOM05D008202 ORTHO05D010302 2.6e-07 59.3 53 54.7
FAN26G3206 Fragaria x ananassa HOM05D008202 ORTHO05D010302 2.6e-07 59.3 53 54.7
RcHm_v2.0_Chr2g0091981 Rosa chinensis HOM05D008202 ORTHO05D010302 3.4e-07 58.9 52 55.8
Nn8g39054 Nelumbo nucifera HOM05D008202 ORTHO05D010302 7.6e-07 57.8 45 57.8
FvH4_1g06280 Fragaria vesca HOM05D008202 ORTHO05D010302 9.9e-07 57.4 53 52.8
FAN19G1093 Fragaria x ananassa HOM05D008202 ORTHO05D010302 9.9e-07 57.4 53 52.8
HPP92_009087 Vanilla planifolia HOM05D008202 ORTHO05D010302 9.9e-07 57.4 55 52.7
Nitab4.5_0002557g0010 Nicotiana tabacum HOM05D001685 ORTHO05D006653 6.4e-06 54.7 86 41.9
Eucgr.C03726 Eucalyptus grandis HOM05D008202 ORTHO05D010302 8.4e-06 54.3 46 60.9


User provided reference genes

Program Settings