Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 2.9e-193 678.3 323 100.0
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 6.4e-145 517.7 324 78.7
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 1.8e-134 483.0 301 78.7
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 1.6e-119 433.3 307 71.3
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 1.6e-119 433.3 305 71.8
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 1.0e-118 430.6 307 70.0
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 1.7e-113 413.3 316 68.4
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 1.6e-111 406.8 310 68.7
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 5.3e-107 391.7 313 64.9
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 8.5e-105 384.4 358 59.8
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 5.5e-104 381.7 306 64.7
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 1.2e-98 364.0 314 63.1
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 3.5e-98 362.5 330 60.9
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 9.1e-91 337.8 338 55.3
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 1.2e-90 337.4 312 57.7
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 2.7e-90 336.3 328 57.9
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 2.7e-90 336.3 311 56.9
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 7.7e-90 334.7 346 54.3
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 1.0e-89 334.3 314 57.6
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 2.9e-89 332.8 312 56.4
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 1.6e-87 327.0 311 57.9
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 3.0e-86 322.8 313 56.5
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 8.9e-86 321.2 314 56.7
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 1.5e-85 320.5 309 57.0
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 1.7e-84 317.0 328 54.6
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 2.2e-84 316.6 328 54.9
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 1.4e-83 313.9 316 57.6
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 1.4e-83 313.9 310 57.1
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 7.0e-83 311.6 314 56.1
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 5.0e-81 305.4 329 55.3
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 1.9e-80 303.5 307 55.4
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 4.3e-80 302.4 336 53.0
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 9.5e-80 301.2 310 56.5
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.6e-79 300.4 309 56.3
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 2.8e-79 299.7 331 54.1
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 4.7e-79 298.9 314 53.5
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 3.0e-78 296.2 312 52.9
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 8.9e-78 294.7 310 51.9
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 1.5e-77 293.9 299 54.8
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 2.6e-77 293.1 309 56.0
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 5.7e-77 292.0 309 54.4
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 7.5e-77 291.6 312 53.5
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 1.7e-76 290.4 300 53.7
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 2.4e-75 286.6 325 52.3
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 3.2e-75 286.2 312 50.3
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 1.2e-74 284.3 325 51.7
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 2.0e-74 283.5 302 56.3
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 3.5e-74 282.7 306 52.3
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 1.3e-73 280.8 315 52.7
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 3.9e-73 279.3 326 52.1
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 4.3e-72 275.8 307 51.5
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 7.3e-72 275.0 312 52.6
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 3.1e-70 269.6 314 50.6
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 8.9e-70 268.1 308 52.6
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 2.0e-69 266.9 284 56.0
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 5.8e-69 265.4 301 51.8
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 5.8e-69 265.4 254 57.5
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 2.9e-68 263.1 297 51.5
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 6.4e-68 261.9 233 60.1
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 2.7e-66 256.5 309 51.1
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 1.2e-63 247.7 310 46.8
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 2.1e-63 246.9 386 42.2
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 1.1e-62 244.6 292 49.0
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 5.2e-62 242.3 292 48.3
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.2e-61 241.1 310 45.8
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 1.2e-61 241.1 322 48.4
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 7.5e-61 238.4 313 48.2
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 2.9e-60 236.5 292 47.9
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 2.9e-60 236.5 292 47.9
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 1.4e-59 234.2 310 45.8
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.9e-59 233.8 328 45.4
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 1.2e-58 231.1 350 43.1
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 4.6e-58 229.2 304 46.7
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 6.0e-58 228.8 314 48.4
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 1.7e-57 227.3 326 47.2
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 1.7e-57 227.3 327 48.3
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 2.3e-57 226.9 309 45.0
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 8.6e-57 224.9 300 47.3
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 9.5e-56 221.5 336 43.5
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 8.1e-55 218.4 304 46.7
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 3.1e-54 216.5 335 45.4
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 1.2e-53 214.5 345 45.5
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 3.5e-50 203.0 285 45.3
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 5.1e-49 199.1 227 54.6
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.5e-48 197.6 308 44.8
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 4.3e-48 196.1 273 48.4
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 4.3e-48 196.1 314 44.3
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 2.1e-47 193.7 356 41.9
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 2.1e-42 177.2 312 40.7
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 8.7e-41 171.8 315 42.5
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 2.8e-39 166.8 171 52.0
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 3.6e-39 166.4 198 48.0
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 6.2e-39 165.6 337 39.2
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 3.1e-38 163.3 323 41.2
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 6.9e-38 162.2 324 39.2
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 5.8e-37 159.1 318 40.9
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 4.9e-36 156.0 313 40.3
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 1.4e-35 154.5 325 40.6
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 2.4e-35 153.7 301 40.5
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 2.7e-34 150.2 234 45.7
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 4.6e-34 149.4 322 38.8
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 3.9e-33 146.4 295 37.3
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 8.7e-33 145.2 301 38.9
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 1.5e-32 144.4 299 39.8
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 9.6e-32 141.7 322 39.4
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 1.6e-31 141.0 297 40.4
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 4.8e-31 139.4 301 40.2
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 4.8e-31 139.4 228 43.4
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 8.1e-31 138.7 294 36.7
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 4.5e-29 132.9 319 38.6
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 1.3e-25 121.3 316 35.4
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.8e-25 120.9 305 35.4
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 1.5e-24 117.9 115 49.6
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 2.5e-24 117.1 279 38.0
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 9.6e-24 115.2 305 38.0
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 8.2e-23 112.1 271 36.5
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 5.3e-22 109.4 308 37.0
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 5.3e-22 109.4 308 37.0
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 2.6e-21 107.1 357 33.1
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 5.8e-21 105.9 326 35.3
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 7.6e-21 105.5 288 37.2
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 1.4e-19 101.3 340 35.0
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 1.9e-19 100.9 284 35.6
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 2.3e-17 94.0 327 33.3
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 5.0e-12 76.3 154 38.3
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 9.4e-11 72.0 117 43.6
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 1.9e-08 64.3 118 39.8
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 9.7e-08 62.0 228 32.9
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 9.7e-08 62.0 49 61.2
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 2.4e-06 57.4 144 38.2


User provided reference genes

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