Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0371561 Lupinus albus HOM05D003689 ORTHO05D003950 2.7e-124 450.3 693 100.0
Lalb_Chr16g0388171 Lupinus albus HOM05D003689 ORTHO05D003950 1.5e-34 152.1 210 73.8
Lalb_Chr05g0222931 Lupinus albus HOM05D003689 ORTHO05D003950 1.3e-33 149.1 213 42.3
Glyma.08G038200 Glycine max HOM05D003689 ORTHO05D003950 4.9e-33 147.1 208 72.1
Glyma.05G230700 Glycine max HOM05D003689 ORTHO05D003950 1.0e-30 139.4 211 69.2
FvH4_1g04540 Fragaria vesca HOM05D003689 ORTHO05D003950 1.1e-29 136.0 201 71.1
VMungo0331G0581 Vigna mungo HOM05D003689 ORTHO05D003950 1.9e-29 135.2 211 67.8
arahy.Tifrunner.gnm1.ann1.EDC6ME Arachis hypogaea HOM05D003689 ORTHO05D003950 5.6e-29 133.7 213 69.0
arahy.Tifrunner.gnm1.ann1.K2CPZ4 Arachis hypogaea HOM05D003689 ORTHO05D003950 5.6e-29 133.7 213 69.0
FAN26G3272 Fragaria x ananassa HOM05D003689 ORTHO05D003950 7.3e-29 133.3 200 72.0
FAN28G1273 Fragaria x ananassa HOM05D003689 ORTHO05D003950 7.3e-29 133.3 200 72.0
RcHm_v2.0_Chr2g0090251 Rosa chinensis HOM05D003689 ORTHO05D003950 7.3e-29 133.3 198 72.7
FAN23G2461 Fragaria x ananassa HOM05D003689 ORTHO05D003950 9.6e-29 132.9 207 69.6
arahy.Tifrunner.gnm1.ann1.3U27PV Arachis hypogaea HOM05D003689 ORTHO05D003950 2.1e-28 131.7 214 68.7
Phvul.010G165600 Phaseolus vulgaris HOM05D003689 ORTHO05D003950 4.8e-28 130.6 203 68.5
arahy.Tifrunner.gnm1.ann1.SBHH31 Arachis hypogaea HOM05D003689 ORTHO05D003950 1.1e-27 129.4 214 68.2
Gorai.010G072200 Gossypium raimondii HOM05D003689 ORTHO05D003950 2.4e-27 128.3 208 68.3
Gohir.D06G062000 Gossypium hirsutum HOM05D003689 ORTHO05D003950 3.1e-27 127.9 208 69.2
Hma1.2p1_1151F.1_g262016 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 3.1e-27 127.9 214 68.2
GSVIVG01015378001 Vitis vinifera HOM05D003689 ORTHO05D003950 3.1e-27 127.9 207 67.6
Cc06_g09790 Coffea canephora HOM05D003689 ORTHO05D003950 4.0e-27 127.5 188 72.9
Gohir.A06G063300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 4.0e-27 127.5 208 67.8
Hma1.2p1_3266F.1_g334670 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 6.9e-27 126.7 208 68.3
Dinv41614 Davidia involucrata HOM05D003689 ORTHO05D003950 1.2e-26 125.9 210 69.0
Eucgr.C03818 Eucalyptus grandis HOM05D003689 ORTHO05D003950 2.6e-26 124.8 205 70.2
Thecc.09G108800 Theobroma cacao HOM05D003689 ORTHO05D003950 4.4e-26 124.0 208 65.9
MD15G1183500 Malus domestica HOM05D003689 ORTHO05D003950 7.6e-26 123.2 208 65.9
Sp6g23340 Schrenkiella parvula HOM05D000055 ORTHO05D003950 7.6e-26 123.2 204 64.7
MELO3C025352.2 Cucumis melo HOM05D003689 ORTHO05D003950 1.3e-25 122.5 205 69.8
Prupe.7G232600 Prunus persica HOM05D003689 ORTHO05D003950 1.3e-25 122.5 208 66.8
ClCG06G008630 Citrullus lanatus HOM05D003689 ORTHO05D003950 2.2e-25 121.7 206 68.4
AT5G21222 Arabidopsis thaliana HOM05D000055 ORTHO05D003950 3.8e-25 120.9 204 64.7
Thhalv10012659m.g Eutrema salsugineum HOM05D000055 ORTHO05D003950 3.8e-25 120.9 204 65.2
CsaV3_1G025520 Cucumis sativus L. HOM05D003689 ORTHO05D003950 8.4e-25 119.8 205 69.3
CARHR191690 Cardamine hirsuta HOM05D000055 ORTHO05D003950 1.1e-24 119.4 190 69.5
Carub.0006s1949 Capsella rubella HOM05D000055 ORTHO05D003950 1.9e-24 118.6 204 64.2
Haze_25759 Corylus avellana HOM05D003689 ORTHO05D003950 1.9e-24 118.6 212 65.1
AL6G32800 Arabidopsis lyrata HOM05D000055 ORTHO05D003950 4.2e-24 117.5 203 64.5
Ca_17333_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 4.2e-24 117.5 170 80.0
C09p54880 Brassica napus HOM05D000055 ORTHO05D003950 5.4e-24 117.1 204 64.2
BolC9t58349H Brassica oleracea HOM05D000055 ORTHO05D003950 5.4e-24 117.1 204 64.2
Aa31LG1G13560 Aethionema arabicum HOM05D000055 ORTHO05D003950 9.3e-24 116.3 187 68.4
MD08G1118600 Malus domestica HOM05D003689 ORTHO05D003950 9.3e-24 116.3 194 67.0
A10p18880 Brassica napus HOM05D000055 ORTHO05D003950 1.2e-23 115.9 204 63.7
BraA10t43967Z Brassica rapa HOM05D000055 ORTHO05D003950 1.2e-23 115.9 204 63.7
Sed0017853 Sechium edule HOM05D003689 ORTHO05D003950 1.6e-23 115.5 206 66.0
CSS0006196 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 3.5e-23 114.4 188 71.3
Thecc.09G039700 Theobroma cacao HOM05D003689 ORTHO05D003950 3.5e-23 114.4 190 67.4
QL12p026389 Quercus lobata HOM05D003689 ORTHO05D003950 6.0e-23 113.6 205 62.9
Prupe.1G452700 Prunus persica HOM05D003689 ORTHO05D003950 7.9e-23 113.2 196 67.3
CAN.G238.2 Capsicum annuum HOM05D003689 ORTHO05D003950 3.0e-22 111.3 208 65.9
PSO210G3978 Papaver somniferum HOM05D003689 ORTHO05D003950 3.0e-22 111.3 211 61.6
PSO210G7239 Papaver somniferum HOM05D003689 ORTHO05D003950 3.0e-22 111.3 210 62.4
Peaxi162Scf00231g00023 Petunia axillaris HOM05D003689 ORTHO05D003950 1.1e-21 109.4 207 64.7
FAN20G2410 Fragaria x ananassa HOM05D003689 ORTHO05D003950 1.5e-21 109.0 206 62.1
Sc18g0001340 Simmondsia chinensis HOM05D003689 ORTHO05D003950 1.5e-21 109.0 197 61.4
PGSC0003DMG400024327 Solanum tuberosum HOM05D003689 ORTHO05D003950 2.5e-21 108.2 205 65.4
TWI63G0545 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 7.4e-21 106.7 209 64.1
Rhsim01G0097100 Rhododendron simsii HOM05D003689 ORTHO05D003950 9.6e-21 106.3 204 60.8
Ciclev10007776m.g Citrus clementina HOM05D003689 ORTHO05D003950 1.3e-20 105.9 205 66.8
CSS0016195 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 1.6e-20 105.5 84 65.5
FvH4_2g36130 Fragaria vesca HOM05D003689 ORTHO05D003950 2.1e-20 105.1 207 60.9
FAN15G3321 Fragaria x ananassa HOM05D003689 ORTHO05D003950 2.1e-20 105.1 207 61.4
Glyma.14G141800 Glycine max HOM05D003689 ORTHO05D003950 2.1e-20 105.1 201 60.2
Sopen07g016320 Solanum pennellii HOM05D003689 ORTHO05D003950 2.8e-20 104.8 198 66.2
Hund09215 Selenicereus undatus HOM05D003689 ORTHO05D003950 3.6e-20 104.4 189 63.0
AL6G37510 Arabidopsis lyrata HOM05D003689 ORTHO05D003950 4.8e-20 104.0 199 56.3
Medtr8g103480 Medicago truncatula HOM05D003689 ORTHO05D003950 4.8e-20 104.0 213 62.4
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 6.2e-20 103.6 193 32.1
THA.LOC104811116 Tarenaya hassleriana HOM05D003689 ORTHO05D003950 6.2e-20 103.6 211 62.1
arahy.Tifrunner.gnm1.ann1.Z43HYI Arachis hypogaea HOM05D003689 ORTHO05D003950 8.1e-20 103.2 170 74.7
Nitab4.5_0004562g0020 Nicotiana tabacum HOM05D003689 ORTHO05D003950 8.1e-20 103.2 208 63.5
Cfa003251 Carpinus fangiana HOM05D003689 ORTHO05D003950 1.4e-19 102.4 211 62.1
Ciclev10007728m.g Citrus clementina HOM05D003689 ORTHO05D003950 1.4e-19 102.4 204 63.2
Lj7A652T76 Lonicera japonica HOM05D003689 ORTHO05D003950 1.4e-19 102.4 203 64.5
Lj4g0026082 Lotus japonicus HOM05D003689 ORTHO05D003950 1.4e-19 102.4 97 56.7
Aqoxy7G03846 Aquilegia oxysepala HOM05D003689 ORTHO05D003950 2.4e-19 101.7 197 66.0
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 2.4e-19 101.7 190 31.6
BcaB04g19771 Brassica carinata HOM05D003689 ORTHO05D003950 3.1e-19 101.3 190 37.9
Cfa013343 Carpinus fangiana HOM05D003689 ORTHO05D003950 3.1e-19 101.3 205 59.0
Nitab4.5_0000114g0090 Nicotiana tabacum HOM05D003689 ORTHO05D003950 3.1e-19 101.3 207 63.3
RcHm_v2.0_Chr6g0305741 Rosa chinensis HOM05D003689 ORTHO05D003950 4.0e-19 100.9 205 61.5
Haze_21848 Corylus avellana HOM05D003689 ORTHO05D003950 5.3e-19 100.5 205 59.0
Sabra18G0068800 Salix brachista HOM05D003689 ORTHO05D003950 5.3e-19 100.5 90 57.8
BcaB06g28622 Brassica carinata HOM05D000888 ORTHO05D000740 6.9e-19 100.1 188 31.9
BcaC04g23586 Brassica carinata HOM05D003689 ORTHO05D003950 9.0e-19 99.8 204 56.9
A09p06120 Brassica napus HOM05D003689 ORTHO05D003950 1.2e-18 99.4 204 56.9
C09p06740 Brassica napus HOM05D003689 ORTHO05D003950 1.2e-18 99.4 204 56.9
BolC9t53595H Brassica oleracea HOM05D003689 ORTHO05D003950 1.2e-18 99.4 204 56.9
BraA09t36253Z Brassica rapa HOM05D003689 ORTHO05D003950 1.2e-18 99.4 204 56.9
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 1.2e-18 99.4 204 44.6
QL02p044325 Quercus lobata HOM05D003689 ORTHO05D003950 1.2e-18 99.4 92 56.5
Duzib150G1680 Durio zibethinus HOM05D003689 ORTHO05D003950 3.4e-18 97.8 208 61.1
Thhalv10003915m.g Eutrema salsugineum HOM05D003689 ORTHO05D003950 3.4e-18 97.8 201 38.3
FAN27G3406 Fragaria x ananassa HOM05D003689 ORTHO05D003950 3.4e-18 97.8 205 60.0
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 3.4e-18 97.8 178 68.5
Potri.018G081700 Populus trichocarpa HOM05D003689 ORTHO05D003950 5.8e-18 97.1 96 52.1
Actinidia31220 Actinidia chinensis HOM05D003689 ORTHO05D003950 7.6e-18 96.7 188 67.0
arahy.Tifrunner.gnm1.ann1.WWE821 Arachis hypogaea HOM05D003689 ORTHO05D003950 7.6e-18 96.7 193 60.6
CDE02G3880 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 7.6e-18 96.7 188 63.3
DCAR_012069 Daucus carota HOM05D001279 ORTHO05D001636 7.6e-18 96.7 166 72.9
Migut.J01154 Erythranthe guttata HOM05D003689 ORTHO05D003950 7.6e-18 96.7 83 56.6
arahy.Tifrunner.gnm1.ann1.6C9669 Arachis hypogaea HOM05D003689 ORTHO05D003950 9.9e-18 96.3 193 60.1
Cc00_g17700 Coffea canephora HOM05D003689 ORTHO05D003950 9.9e-18 96.3 186 64.5
COL.COLO4_34846 Corchorus olitorius HOM05D001279 ORTHO05D001636 9.9e-18 96.3 92 54.3
Manes.16G066100 Manihot esculenta HOM05D003689 ORTHO05D003950 1.3e-17 95.9 205 60.5
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 2.2e-17 95.1 217 29.0
QL02p045402 Quercus lobata HOM05D003689 ORTHO05D003950 2.2e-17 95.1 79 60.8
Nitab4.5_0000052g0100 Nicotiana tabacum HOM05D003689 ORTHO05D003950 2.9e-17 94.7 186 63.4
Nitab4.5_0003338g0050 Nicotiana tabacum HOM05D003689 ORTHO05D003950 2.9e-17 94.7 186 62.9
MELO3C003585.2 Cucumis melo HOM05D003689 ORTHO05D003950 3.8e-17 94.4 204 47.1
Oeu002241.1 Olea europaea HOM05D003689 ORTHO05D003950 3.8e-17 94.4 165 68.5
TAR624G0802 Trochodendron aralioides HOM05D003689 ORTHO05D003950 3.8e-17 94.4 204 61.3
DCAR_004497 Daucus carota HOM05D003689 ORTHO05D003950 6.4e-17 93.6 185 41.1
Zm00001eb315460 Zea mays HOM05D003689 ORTHO05D003950 6.4e-17 93.6 208 28.4
BcaC04g19516 Brassica carinata HOM05D000055 ORTHO05D000057 1.4e-16 92.4 91 47.3
Ca_12812_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 2.4e-16 91.7 207 61.8
Sabra18G0038000 Salix brachista HOM05D003689 ORTHO05D003950 3.2e-16 91.3 185 62.2
EL10Ac2g04074 Beta vulgaris HOM05D003689 ORTHO05D003950 5.5e-16 90.5 185 47.6
Solyc07g032380.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 5.5e-16 90.5 82 58.5
Medtr1g008310 Medicago truncatula HOM05D003689 ORTHO05D003950 7.1e-16 90.1 209 30.6
THA.LOC104799204 Tarenaya hassleriana HOM05D003689 ORTHO05D003950 9.3e-16 89.7 190 56.8
vmacro20709 Vaccinium macrocarpon HOM05D003689 ORTHO05D003950 9.3e-16 89.7 157 35.7
CDE04G3773 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 1.2e-15 89.4 208 28.4
GSVIVG01035672001 Vitis vinifera HOM05D003689 ORTHO05D003950 2.1e-15 88.6 190 62.1
Eucgr.C02891 Eucalyptus grandis HOM05D003689 ORTHO05D003950 2.7e-15 88.2 166 74.1
Gohir.A08G250800 Gossypium hirsutum HOM05D003689 ORTHO05D003950 2.7e-15 88.2 192 62.5
Ah.16g105250 Amaranthus hybridus HOM05D003689 ORTHO05D003950 4.6e-15 87.4 188 45.2
Manes.03G021600 Manihot esculenta HOM05D003689 ORTHO05D003950 1.0e-14 86.3 205 59.5
Lalb_Chr14g0362401 Lupinus albus HOM05D003689 ORTHO05D003950 1.3e-14 85.9 204 59.3
AUR62009331 Chenopodium quinoa HOM05D003689 ORTHO05D003950 3.0e-14 84.7 186 50.5
SGA_v2.0_scaffold163G38088 Striga asiatica HOM05D003689 ORTHO05D003950 3.0e-14 84.7 185 62.7
AUR62023017 Chenopodium quinoa HOM05D003689 ORTHO05D003950 3.9e-14 84.3 186 51.6
Gohir.D08G272300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 3.9e-14 84.3 79 54.4
Gorai.004G290700 Gossypium raimondii HOM05D003689 ORTHO05D003950 3.9e-14 84.3 79 54.4
MBI04_g29969_MAGBIO Magnolia biondii HOM05D003689 ORTHO05D003950 3.9e-14 84.3 213 57.3
CiPaw.07G207300 Carya illinoinensis HOM05D003689 ORTHO05D003950 5.1e-14 84.0 205 55.1
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 1.5e-13 82.4 171 29.8
Hma1.2p1_0140F.1_g063530 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 1.5e-13 82.4 187 62.0
CANSAT56G1603 Cannabis sativa HOM05D003689 ORTHO05D003950 1.9e-13 82.0 211 58.8
CANSAT56G4471 Cannabis sativa HOM05D003689 ORTHO05D003950 1.9e-13 82.0 211 58.8
ATR0315G024 Amborella trichopoda HOM05D003689 ORTHO05D003950 2.5e-13 81.6 90 46.7
EL10Ac8g18479 Beta vulgaris HOM05D003689 ORTHO05D003950 2.5e-13 81.6 189 58.7
HanXRQChr06g0180011 Helianthus annuus HOM05D003689 ORTHO05D003950 2.5e-13 81.6 189 63.0
Actinidia32678 Actinidia chinensis HOM05D003689 ORTHO05D003950 5.6e-13 80.5 94 47.9
Sc23g0005900 Simmondsia chinensis HOM05D003689 ORTHO05D003950 7.4e-13 80.1 186 63.4
PGR102G1523 Punica granatum HOM05D003689 ORTHO05D003950 9.6e-13 79.7 205 57.1
Ah.14g082150 Amaranthus hybridus HOM05D003689 ORTHO05D003950 1.3e-12 79.3 202 55.9
MSTRG.6008 Avicennia marina HOM05D003689 ORTHO05D003950 2.1e-12 78.6 86 51.2
Psat7g013440 Pisum sativum HOM05D003689 ORTHO05D003950 2.8e-12 78.2 76 53.9
Potri.018G037200 Populus trichocarpa HOM05D003689 ORTHO05D003950 2.8e-12 78.2 185 58.9
AUR62021489 Chenopodium quinoa HOM05D003689 ORTHO05D003950 3.7e-12 77.8 201 57.7
Peaxi162Scf00523g00624 Petunia axillaris HOM05D003689 ORTHO05D003950 4.8e-12 77.4 76 47.4
Lsat_1_v5_gn_8_95421 Lactuca sativa HOM05D003689 ORTHO05D003950 6.2e-12 77.0 194 61.9
CAN.G797.4 Capsicum annuum HOM05D003689 ORTHO05D003950 1.1e-11 76.3 186 59.7
Atru.chr7.2161 Acer truncatum HOM05D003689 ORTHO05D003950 1.8e-11 75.5 179 62.0
Sed0002455 Sechium edule HOM05D003689 ORTHO05D003950 1.8e-11 75.5 199 59.8
AUR62010979 Chenopodium quinoa HOM05D003689 ORTHO05D003950 4.0e-11 74.3 200 57.0
Sopen08g022090 Solanum pennellii HOM05D003689 ORTHO05D003950 6.9e-11 73.6 78 43.6
PGSC0003DMG400014513 Solanum tuberosum HOM05D003689 ORTHO05D003950 6.9e-11 73.6 78 43.6
MSTRG.14008 Avicennia marina HOM05D003689 ORTHO05D003950 1.2e-10 72.8 67 49.3
Psat0s586g0040 Pisum sativum HOM05D003689 ORTHO05D003950 1.2e-10 72.8 74 48.6
Solyc08g068230.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 1.2e-10 72.8 78 43.6
Actinidia32677 Actinidia chinensis HOM05D001279 ORTHO05D003950 3.4e-10 71.2 66 53.0
Os01g0228400 Oryza sativa ssp. japonica HOM05D003689 ORTHO05D003950 4.5e-10 70.9 76 39.5
EL10Ac8g18465 Beta vulgaris HOM05D003689 ORTHO05D003950 1.3e-09 69.3 189 62.4
EL10Ac8g18466 Beta vulgaris HOM05D003689 ORTHO05D003950 1.3e-09 69.3 189 62.4
Duzib187G1779 Durio zibethinus HOM05D003689 ORTHO05D003950 3.8e-09 67.8 190 58.4
MD02G1045100 Malus domestica HOM05D003689 ORTHO05D003950 3.8e-09 67.8 62 53.2
SGA_v2.0_scaffold163G38089 Striga asiatica HOM05D003689 ORTHO05D003950 3.8e-09 67.8 81 43.2
PGR044G1205 Punica granatum HOM05D003689 ORTHO05D003950 4.9e-09 67.4 166 64.5
TWI34G0694 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 1.9e-08 65.5 79 49.4
EL10Ac8g18468 Beta vulgaris HOM05D003689 ORTHO05D003950 5.5e-08 63.9 156 30.8
ECA238G3870 Erigeron canadensis HOM05D003689 ORTHO05D009814 9.3e-08 63.2 194 59.3
EL10Ac8g18472 Beta vulgaris HOM05D003689 ORTHO05D003950 1.0e-06 59.7 40 70.0
EL10Ac8g18473 Beta vulgaris HOM05D003689 ORTHO05D003950 1.3e-06 59.3 51 58.8
Pp3c16_9240 Physcomitrium patens HOM05D041143 ORTHO05D003950 1.8e-06 58.9 210 51.4
FAN23G2385 Fragaria x ananassa HOM05D003689 ORTHO05D003950 3.9e-06 57.8 129 32.6
BcaC04g19515 Brassica carinata HOM05D003689 ORTHO05D003950 5.1e-06 57.4 39 64.1


User provided reference genes

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