Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 4.1e-262 907.5 463 100.0
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 3.1e-225 785.0 470 87.2
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 7.2e-198 694.1 472 78.0
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 1.3e-194 683.3 469 77.2
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 1.7e-194 682.9 473 76.7
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 1.8e-193 679.5 469 77.2
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 1.5e-190 669.8 475 75.8
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 4.0e-188 661.8 464 75.2
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 3.1e-185 652.1 465 74.2
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 1.6e-184 649.8 470 73.6
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 2.9e-183 645.6 438 75.6
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 3.8e-183 645.2 471 73.9
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 3.6e-181 638.6 463 73.2
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 1.0e-180 637.1 471 70.9
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 5.2e-180 634.8 463 73.0
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 1.2e-179 633.6 467 71.7
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 4.4e-179 631.7 478 71.8
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 1.3e-178 630.2 467 71.7
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 2.8e-178 629.0 472 72.5
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 8.3e-178 627.5 461 71.1
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 8.3e-178 627.5 462 72.1
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 7.0e-177 624.4 398 78.1
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 9.2e-177 624.0 470 71.9
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 1.2e-176 623.6 467 71.9
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 1.6e-176 623.2 458 71.8
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 3.5e-176 622.1 470 70.9
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 4.5e-176 621.7 468 71.8
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 4.5e-176 621.7 469 71.4
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 1.3e-175 620.2 467 70.2
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 1.7e-175 619.8 471 70.5
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 2.9e-175 619.0 467 70.0
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 3.8e-175 618.6 378 81.2
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 3.8e-175 618.6 465 70.8
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 5.0e-175 618.2 474 69.2
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 6.6e-175 617.8 455 71.0
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 6.6e-175 617.8 464 71.3
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 8.6e-175 617.5 465 69.5
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 1.5e-174 616.7 465 70.5
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 1.5e-174 616.7 465 70.3
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 1.5e-174 616.7 410 75.6
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 2.5e-174 615.9 457 70.9
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 3.3e-174 615.5 453 70.6
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 5.6e-174 614.8 378 80.7
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 7.3e-174 614.4 467 70.2
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 2.8e-173 612.5 378 80.4
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.0e-172 610.5 465 69.2
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 6.8e-172 607.8 478 69.2
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 8.9e-172 607.4 465 69.0
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 1.2e-171 607.1 375 79.7
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 1.5e-171 606.7 464 68.3
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 1.5e-171 606.7 374 80.2
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 2.0e-171 606.3 454 69.6
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.4e-171 605.1 463 71.1
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 4.4e-171 605.1 468 69.2
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 5.7e-171 604.7 438 70.3
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.3e-170 603.6 463 70.8
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 2.2e-170 602.8 462 69.3
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 2.9e-170 602.4 455 69.9
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 2.9e-170 602.4 465 69.0
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 4.9e-170 601.7 373 77.5
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 6.4e-170 601.3 444 69.8
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 8.3e-170 600.9 469 68.9
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 2.4e-169 599.4 454 69.2
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 9.2e-169 597.4 461 69.6
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 1.2e-168 597.0 375 78.1
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 1.6e-168 596.7 465 68.2
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 3.9e-167 592.0 461 68.5
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 8.6e-167 590.9 458 68.1
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 4.3e-166 588.6 492 64.4
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 1.6e-165 586.6 476 66.8
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 8.0e-165 584.3 388 73.2
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 1.4e-164 583.6 464 65.9
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 8.9e-164 580.9 376 75.3
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 7.5e-163 577.8 389 72.5
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 7.5e-163 577.8 429 69.5
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 1.3e-162 577.0 398 72.9
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 1.7e-162 576.6 389 73.0
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 4.9e-162 575.1 468 67.1
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 1.9e-161 573.2 467 67.7
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 2.4e-161 572.8 392 73.5
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 3.2e-161 572.4 390 72.6
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 9.2e-161 570.9 458 64.4
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 9.2e-161 570.9 457 65.0
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 3.5e-160 568.9 403 72.5
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 7.8e-160 567.8 401 69.6
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 1.3e-159 567.0 463 64.1
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 6.6e-159 564.7 385 71.4
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 6.6e-159 564.7 467 64.2
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 2.5e-158 562.8 401 69.6
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 2.5e-158 562.8 401 69.6
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 4.7e-157 558.5 434 66.6
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 2.3e-156 556.2 399 69.2
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 4.0e-156 555.4 399 68.9
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 4.0e-156 555.4 399 68.9
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 2.2e-154 549.7 460 64.1
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 2.1e-152 543.1 462 66.2
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 5.4e-145 518.5 458 59.2
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 7.1e-145 518.1 434 61.5
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 5.1e-143 511.9 394 65.2
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 7.6e-139 498.0 472 56.1
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.3e-138 497.3 386 69.2
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 1.7e-138 496.9 310 79.7
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 2.5e-134 483.0 340 72.9
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 2.3e-111 406.8 412 55.3
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 3.7e-109 399.4 252 77.4
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 4.6e-104 382.5 374 53.2
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 1.9e-102 377.1 372 51.9
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 5.7e-102 375.6 387 49.1
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 2.6e-99 366.7 362 51.7
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 5.5e-97 359.0 381 50.9
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 2.0e-94 350.5 392 50.8
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.5e-81 307.0 317 51.4
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 2.3e-79 300.4 340 46.2
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 3.5e-75 286.6 401 43.9
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 7.3e-57 225.7 136 75.0
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 1.9e-49 201.1 254 48.0
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 9.5e-41 172.2 113 75.2
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 8.3e-37 159.1 95 73.7
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 1.5e-30 138.3 150 60.7
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 7.1e-28 129.4 83 81.9
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 3.5e-27 127.1 83 80.7
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 6.6e-26 122.9 284 33.1
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.1e-25 122.1 261 33.7
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 3.3e-25 120.6 82 74.4
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 5.2e-23 113.2 81 71.6
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 6.9e-23 112.8 366 29.2
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.5e-22 111.7 72 77.8
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.8e-16 90.1 140 50.0
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.4e-12 77.8 72 59.7
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 2.1e-11 74.7 122 39.3
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 3.5e-11 73.9 131 46.6
TPR.G36012 Trifolium pratense HOM05D005548 ORTHO05D007497 2.5e-09 67.8 127 43.3
Lsat_1_v5_gn_5_96001 Lactuca sativa HOM05D005548 ORTHO05D029961 1.8e-07 61.6 120 40.0


User provided reference genes

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