Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 4.0e-148 528.1 273 100.0
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 1.9e-142 509.2 272 95.2
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 3.8e-138 495.0 272 91.2
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 1.1e-137 493.4 272 92.3
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 1.1e-137 493.4 278 91.4
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 3.2e-137 491.9 272 93.4
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 4.6e-136 488.0 272 90.8
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 6.0e-136 487.6 273 91.9
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 1.0e-135 486.9 273 92.7
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 3.0e-135 485.3 272 90.4
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 3.0e-135 485.3 273 91.9
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 2.4e-132 475.7 285 85.6
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 3.1e-132 475.3 272 87.5
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 6.5e-130 467.6 272 85.7
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 8.4e-130 467.2 272 85.3
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 1.1e-129 466.8 272 84.6
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 2.5e-129 465.7 272 83.8
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 3.2e-129 465.3 272 85.3
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 3.2e-129 465.3 272 83.8
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 4.2e-129 464.9 272 84.2
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 5.5e-129 464.5 272 84.9
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 7.1e-129 464.2 272 84.6
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.2e-128 463.4 272 83.8
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 2.7e-128 462.2 272 84.6
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 3.5e-128 461.8 272 84.6
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 4.6e-128 461.5 272 84.2
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 7.9e-128 460.7 272 83.1
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 1.0e-127 460.3 272 86.8
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 1.8e-127 459.5 273 83.9
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 3.0e-127 458.8 272 82.4
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 3.0e-127 458.8 272 84.6
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 5.1e-127 458.0 272 83.1
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 6.7e-127 457.6 272 83.1
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 6.7e-127 457.6 272 83.1
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 8.7e-127 457.2 272 83.5
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 8.7e-127 457.2 272 82.7
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.1e-126 456.8 272 83.5
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 1.1e-126 456.8 272 83.5
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 2.5e-126 455.7 272 82.0
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 1.6e-125 453.0 272 80.9
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 2.2e-125 452.6 272 83.8
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 1.1e-124 450.3 272 82.4
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 1.8e-124 449.5 272 81.6
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 3.1e-124 448.7 272 82.0
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 6.9e-124 447.6 277 80.1
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 9.0e-124 447.2 272 80.5
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 2.0e-123 446.0 272 82.4
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 2.0e-123 446.0 272 79.4
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 2.6e-123 445.7 272 80.9
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 2.6e-123 445.7 272 80.9
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 3.4e-123 445.3 272 80.1
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 3.4e-123 445.3 272 80.1
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 4.5e-123 444.9 272 81.2
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 5.9e-123 444.5 260 83.8
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 5.9e-123 444.5 272 81.2
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 5.9e-123 444.5 272 81.2
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 1.0e-122 443.7 272 80.9
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 1.0e-122 443.7 272 80.5
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 1.0e-122 443.7 272 80.1
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 1.7e-122 443.0 264 83.3
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 1.7e-122 443.0 272 80.5
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 3.8e-122 441.8 272 79.4
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 8.5e-122 440.7 272 78.7
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 1.4e-121 439.9 272 79.0
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 1.9e-121 439.5 272 79.0
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 1.9e-121 439.5 272 79.0
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 2.5e-121 439.1 272 79.4
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 2.5e-121 439.1 272 82.0
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 3.2e-121 438.7 272 80.5
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 9.4e-121 437.2 272 80.5
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 9.4e-121 437.2 272 80.1
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 2.1e-120 436.0 272 79.0
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 2.7e-120 435.6 272 79.0
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 2.7e-120 435.6 272 79.0
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 2.7e-120 435.6 272 79.0
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 3.6e-120 435.3 272 78.7
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 3.6e-120 435.3 272 78.7
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 3.6e-120 435.3 272 78.7
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 3.6e-120 435.3 272 78.7
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 3.6e-120 435.3 272 78.7
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 1.0e-119 433.7 272 80.1
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 1.4e-119 433.3 272 78.7
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 6.7e-119 431.0 284 75.7
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 8.8e-119 430.6 268 80.2
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 1.1e-118 430.3 272 77.9
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 2.0e-118 429.5 272 79.8
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 5.7e-118 427.9 272 82.7
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 6.3e-117 424.5 284 74.6
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 6.3e-117 424.5 272 77.6
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 6.3e-117 424.5 294 74.1
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 1.1e-116 423.7 235 92.3
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 6.9e-116 421.0 319 68.3
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 2.2e-114 416.0 271 75.3
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 2.5e-113 412.5 272 80.5
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 5.1e-111 404.8 310 67.4
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 9.7e-110 400.6 235 84.7
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.7e-109 399.8 240 83.3
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 2.2e-109 399.4 272 78.3
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 2.8e-109 399.1 342 62.6
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.4e-105 386.7 272 76.5
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 9.4e-105 384.0 263 74.9
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 1.8e-103 379.8 222 82.4
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 3.0e-103 379.0 272 68.4
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 9.1e-100 367.5 272 69.1
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 4.5e-99 365.2 329 61.4
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 1.0e-98 364.0 222 79.7
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 1.0e-98 364.0 219 84.9
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.5e-89 333.6 206 80.6
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 1.9e-89 333.2 345 55.1
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 1.8e-87 326.6 219 75.3
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.2e-86 323.9 272 67.3
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 2.3e-82 309.7 270 62.2
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 2.3e-82 309.7 313 52.7
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 2.8e-77 292.7 176 80.1
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 3.9e-74 282.3 169 81.1
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 5.0e-74 282.0 282 51.4
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 8.3e-69 264.6 308 52.9
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 2.6e-62 243.0 272 52.9
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 5.8e-62 241.9 247 51.0
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 6.2e-56 221.9 176 64.2
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 1.8e-55 220.3 176 65.3
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 1.5e-54 217.2 202 57.4
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 7.1e-52 208.4 217 55.3
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 1.2e-51 207.6 129 75.2
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 1.0e-50 204.5 144 74.3
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 2.3e-50 203.4 144 68.8
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 8.1e-48 194.9 194 53.6
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 1.7e-45 187.2 131 73.3
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 6.4e-45 185.3 111 83.8
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 7.8e-43 178.3 318 37.1
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 1.1e-39 167.9 316 35.4
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 5.8e-38 162.2 319 34.2
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 2.4e-36 156.8 293 34.5
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 7.8e-35 151.8 92 78.3
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 1.1e-31 141.4 113 67.3
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 1.4e-31 141.0 111 69.4
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 1.6e-27 127.5 74 82.4
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 4.9e-21 105.9 96 63.5
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 8.4e-21 105.1 73 67.1
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 2.8e-16 90.1 59 79.7
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 2.0e-06 57.4 33 87.9
MD01G1007700 Malus domestica HOM05D005314 ORTHO05D246798 4.5e-06 56.2 38 71.1


User provided reference genes

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