Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0365931 Lupinus albus HOM05D003833 ORTHO05D004209 7.1e-145 517.3 273 100.0
Lj1g0026826 Lotus japonicus HOM05D003833 ORTHO05D004209 2.2e-130 469.2 274 88.7
Ca_08401_v3 Cicer arietinum L. HOM05D003833 ORTHO05D004209 2.3e-127 459.1 274 87.6
TPR.G9312 Trifolium pratense HOM05D003833 ORTHO05D004209 4.8e-125 451.4 275 86.2
Psat3g078000 Pisum sativum HOM05D003833 ORTHO05D004209 3.1e-124 448.7 274 85.4
Glyma.03G129100 Glycine max HOM05D003833 ORTHO05D004209 3.4e-123 445.3 275 84.7
VMungo1383G2371 Vigna mungo HOM05D003833 ORTHO05D004209 7.7e-123 444.1 275 84.4
Phvul.001G124300 Phaseolus vulgaris HOM05D003833 ORTHO05D004209 2.9e-122 442.2 275 84.0
arahy.Tifrunner.gnm1.ann1.C9KHWR Arachis hypogaea HOM05D003833 ORTHO05D004209 3.8e-122 441.8 275 84.0
Medtr7g090160 Medicago truncatula HOM05D003833 ORTHO05D004209 3.8e-122 441.8 275 84.4
Glyma.19G131500 Glycine max HOM05D003833 ORTHO05D004209 1.4e-121 439.9 275 84.4
Haze_19732 Corylus avellana HOM05D003833 ORTHO05D004209 4.6e-120 434.9 273 81.0
Manes.09G008001 Manihot esculenta HOM05D003833 ORTHO05D004209 4.6e-120 434.9 273 82.4
FvH4_6g25150 Fragaria vesca HOM05D003833 ORTHO05D004209 1.4e-119 433.3 273 81.7
FAN05G1327 Fragaria x ananassa HOM05D003833 ORTHO05D004209 2.3e-119 432.6 273 81.3
FAN05G4135 Fragaria x ananassa HOM05D003833 ORTHO05D004209 2.3e-119 432.6 273 81.3
RcHm_v2.0_Chr1g0334171 Rosa chinensis HOM05D003833 ORTHO05D004209 3.9e-119 431.8 273 81.0
Cpa.g.sc49.96 Carica papaya HOM05D003833 ORTHO05D004209 4.3e-118 428.3 273 79.9
FAN02G2058 Fragaria x ananassa HOM05D003833 ORTHO05D004209 5.7e-118 427.9 273 80.6
Cfa016709 Carpinus fangiana HOM05D003833 ORTHO05D004209 9.7e-118 427.2 273 79.1
CANSAT64G1401 Cannabis sativa HOM05D003833 ORTHO05D004209 1.3e-117 426.8 274 81.8
Prupe.7G045500 Prunus persica HOM05D003833 ORTHO05D004209 8.2e-117 424.1 273 79.1
arahy.Tifrunner.gnm1.ann1.LP5CTB Arachis hypogaea HOM05D003833 ORTHO05D004209 1.1e-116 423.7 305 75.4
FAN14G1808 Fragaria x ananassa HOM05D003833 ORTHO05D004209 3.1e-116 422.2 284 78.2
MD12G1094200 Malus domestica HOM05D003833 ORTHO05D004209 3.1e-116 422.2 273 78.8
PGR042G2932 Punica granatum HOM05D003833 ORTHO05D004209 3.1e-116 422.2 274 80.3
ClCG04G004210 Citrullus lanatus HOM05D003833 ORTHO05D004209 9.1e-116 420.6 274 79.2
QL07p007726 Quercus lobata HOM05D003833 ORTHO05D004209 1.2e-115 420.2 273 78.4
MELO3C019039.2 Cucumis melo HOM05D003833 ORTHO05D004209 2.6e-115 419.1 274 78.1
CsaV3_4G027860 Cucumis sativus L. HOM05D003833 ORTHO05D004209 2.6e-115 419.1 274 78.1
MD14G1084400 Malus domestica HOM05D003833 ORTHO05D004209 2.6e-115 419.1 273 78.0
Sed0017232 Sechium edule HOM05D003833 ORTHO05D004209 1.0e-114 417.2 274 78.8
CiPaw.09G044700 Carya illinoinensis HOM05D003833 ORTHO05D004209 1.3e-114 416.8 273 78.0
Duzib093G1609 Durio zibethinus HOM05D003833 ORTHO05D004209 1.3e-114 416.8 274 79.9
Lj1A1105T22 Lonicera japonica HOM05D003833 ORTHO05D004209 1.3e-114 416.8 271 79.7
PGR142G2709 Punica granatum HOM05D003833 ORTHO05D004209 2.9e-114 415.6 274 79.6
Thecc.05G140900 Theobroma cacao HOM05D003833 ORTHO05D004209 6.5e-114 414.5 274 78.5
ECA232G1919 Erigeron canadensis HOM05D003833 ORTHO05D004209 1.1e-113 413.7 268 79.1
Gohir.A07G024700 Gossypium hirsutum HOM05D003833 ORTHO05D004209 3.2e-113 412.1 274 76.6
Atru.chr1.1464 Acer truncatum HOM05D003833 ORTHO05D004209 4.2e-113 411.8 274 78.5
CSS0041120 Camellia sinensis var. sinensis HOM05D003833 ORTHO05D004209 4.2e-113 411.8 271 78.6
TWI53G1459 Tripterygium wilfordii HOM05D003833 ORTHO05D004209 5.5e-113 411.4 275 78.2
Potri.006G042600 Populus trichocarpa HOM05D003833 ORTHO05D004209 9.4e-113 410.6 273 77.3
Migut.K00123 Erythranthe guttata HOM05D003833 ORTHO05D004209 1.6e-112 409.8 272 77.6
Lj2A394G34 Lonicera japonica HOM05D003833 ORTHO05D004209 2.1e-112 409.5 269 78.4
Dinv08489 Davidia involucrata HOM05D003833 ORTHO05D004209 3.6e-112 408.7 271 76.8
Sed0027268 Sechium edule HOM05D003833 ORTHO05D004209 4.7e-112 408.3 273 76.9
Ciclev10005607m.g Citrus clementina HOM05D003833 ORTHO05D004209 6.1e-112 407.9 275 77.8
COL.COLO4_33945 Corchorus olitorius HOM05D003833 ORTHO05D004209 7.9e-112 407.5 274 78.1
Actinidia39173 Actinidia chinensis HOM05D003833 ORTHO05D004209 1.4e-111 406.8 269 77.0
Lsat_1_v5_gn_4_129320 Lactuca sativa HOM05D003833 ORTHO05D004209 1.4e-111 406.8 271 77.9
DCAR_020545 Daucus carota HOM05D003833 ORTHO05D004209 1.8e-111 406.4 270 78.1
HanXRQChr09g0266491 Helianthus annuus HOM05D003833 ORTHO05D004209 2.3e-111 406.0 269 78.1
Atru.chr1.1452 Acer truncatum HOM05D003833 ORTHO05D004209 3.0e-111 405.6 274 77.7
Gorai.001G029600 Gossypium raimondii HOM05D003833 ORTHO05D004209 5.1e-111 404.8 274 75.5
PGSC0003DMG400010441 Solanum tuberosum HOM05D003833 ORTHO05D004209 6.7e-111 404.4 272 76.8
Gohir.D07G028300 Gossypium hirsutum HOM05D003833 ORTHO05D004209 1.5e-110 403.3 274 75.2
Sabra06G0028900 Salix brachista HOM05D003833 ORTHO05D004209 3.3e-110 402.1 273 75.5
CARHR198510 Cardamine hirsuta HOM05D003833 ORTHO05D004209 9.7e-110 400.6 274 77.0
Carub.0006s1298 Capsella rubella HOM05D003833 ORTHO05D004209 1.3e-109 400.2 274 76.6
SGA_v2.0_scaffold94G28522 Striga asiatica HOM05D003833 ORTHO05D004209 1.3e-109 400.2 272 76.5
AL6G25600 Arabidopsis lyrata HOM05D003833 ORTHO05D004209 1.7e-109 399.8 274 77.0
AT5G14800 Arabidopsis thaliana HOM05D003833 ORTHO05D004209 1.7e-109 399.8 274 77.0
MSTRG.10798 Avicennia marina HOM05D003833 ORTHO05D004209 1.7e-109 399.8 271 77.9
Solyc02g068640.3 Solanum lycopersicum HOM05D003833 ORTHO05D004209 1.7e-109 399.8 271 76.4
Sopen02g017810 Solanum pennellii HOM05D003833 ORTHO05D004209 1.7e-109 399.8 271 76.4
Aqoxy2G03781 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 8.2e-109 397.5 270 77.4
MSTRG.15651 Avicennia marina HOM05D003833 ORTHO05D004209 8.2e-109 397.5 271 76.0
Thhalv10014353m.g Eutrema salsugineum HOM05D003833 ORTHO05D004209 1.1e-108 397.1 274 77.0
Sp6g29240 Schrenkiella parvula HOM05D003833 ORTHO05D004209 1.8e-108 396.4 274 76.3
Aqoxy2G00325 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 2.4e-108 396.0 270 76.7
Sc13g0001320 Simmondsia chinensis HOM05D003833 ORTHO05D004209 5.3e-108 394.8 268 76.9
THA.LOC104816595 Tarenaya hassleriana HOM05D003833 ORTHO05D004209 5.3e-108 394.8 276 75.4
A10p23880 Brassica napus HOM05D003833 ORTHO05D004209 9.1e-108 394.0 274 75.5
Dinv34388 Davidia involucrata HOM05D003833 ORTHO05D004209 1.2e-107 393.7 289 71.3
BcaB08g36945 Brassica carinata HOM05D003833 ORTHO05D004209 1.5e-107 393.3 274 75.5
BolC9t59073H Brassica oleracea HOM05D003833 ORTHO05D004209 1.5e-107 393.3 274 75.2
C09p62360 Brassica napus HOM05D003833 ORTHO05D004209 3.5e-107 392.1 274 74.8
BcaC04g19007 Brassica carinata HOM05D003833 ORTHO05D004209 4.5e-107 391.7 274 74.8
AUR62030362 Chenopodium quinoa HOM05D003833 ORTHO05D004209 5.9e-107 391.3 273 74.0
Sc13g0001340 Simmondsia chinensis HOM05D003833 ORTHO05D004209 5.9e-107 391.3 268 76.9
BraA10t44452Z Brassica rapa HOM05D003833 ORTHO05D004209 7.7e-107 391.0 274 75.2
TAR623G1635 Trochodendron aralioides HOM05D003833 ORTHO05D004209 7.7e-107 391.0 273 73.6
GSVIVG01033588001 Vitis vinifera HOM05D003833 ORTHO05D004209 1.0e-106 390.6 271 74.5
EL10Ac3g07192 Beta vulgaris HOM05D003833 ORTHO05D004209 6.5e-106 387.9 273 73.6
Oeu029492.1 Olea europaea HOM05D003833 ORTHO05D004209 6.5e-106 387.9 277 73.6
BcaB01g05096 Brassica carinata HOM05D003833 ORTHO05D004209 8.5e-106 387.5 274 74.8
C03p07820 Brassica napus HOM05D003833 ORTHO05D004209 8.5e-106 387.5 274 74.8
BolC3t13281H Brassica oleracea HOM05D003833 ORTHO05D004209 8.5e-106 387.5 274 74.8
A03p06820 Brassica napus HOM05D003833 ORTHO05D004209 1.1e-105 387.1 274 74.8
Peaxi162Scf00149g00116 Petunia axillaris HOM05D003833 ORTHO05D004209 1.1e-105 387.1 282 72.0
Ah.04g151120 Amaranthus hybridus HOM05D003833 ORTHO05D004209 1.9e-105 386.3 274 73.4
SHI05043 Sapria himalayana HOM05D003833 ORTHO05D004209 7.2e-105 384.4 265 75.5
BraA03t10007Z Brassica rapa HOM05D003833 ORTHO05D004209 1.0e-103 380.6 278 73.7
Aa31LG11G14650 Aethionema arabicum HOM05D003833 ORTHO05D004209 1.4e-103 380.2 316 66.8
Hund24632 Selenicereus undatus HOM05D003833 ORTHO05D004209 6.7e-103 377.9 273 71.8
PSO210G1377 Papaver somniferum HOM05D003833 ORTHO05D004209 8.8e-103 377.5 270 71.5
PSO832G0079 Papaver somniferum HOM05D003833 ORTHO05D004209 8.8e-103 377.5 270 71.5
AUR62040845 Chenopodium quinoa HOM05D003833 ORTHO05D004209 8.2e-101 370.9 273 72.2
vmacro07822 Vaccinium macrocarpon HOM05D003833 ORTHO05D004209 3.1e-100 369.0 364 57.4
PSO782G0909 Papaver somniferum HOM05D003833 ORTHO05D004209 7.0e-100 367.9 270 70.0
Ah.13g077020 Amaranthus hybridus HOM05D003833 ORTHO05D004209 2.5e-97 359.4 287 65.5
CDE09G0749 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 4.2e-97 358.6 268 69.8
MBI13_g29520_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 7.2e-97 357.8 261 70.9
CDE02G3693 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 2.1e-96 356.3 268 69.0
Nitab4.5_0003379g0050 Nicotiana tabacum HOM05D003833 ORTHO05D004209 2.1e-96 356.3 332 59.9
Nn7g36480 Nelumbo nucifera HOM05D003833 ORTHO05D004209 5.2e-95 351.7 269 68.8
Nitab4.5_0006282g0020 Nicotiana tabacum HOM05D003833 ORTHO05D004209 5.2e-95 351.7 321 61.7
HPP92_001015 Vanilla planifolia HOM05D003833 ORTHO05D004209 6.7e-95 351.3 266 67.7
Cc06_g18620 Coffea canephora HOM05D003833 ORTHO05D004209 1.5e-94 350.1 253 71.9
ATR0721G010 Amborella trichopoda HOM05D003833 ORTHO05D004209 4.4e-94 348.6 270 68.1
unitig_26.g8850 Utricularia gibba HOM05D003833 ORTHO05D004209 1.3e-93 347.1 265 69.8
Os01g0948400 Oryza sativa ssp. japonica HOM05D003833 ORTHO05D004209 2.8e-93 345.9 275 65.5
SEGI_35199 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 3.2e-89 332.4 261 65.5
Prupe.7G045400 Prunus persica HOM05D003833 ORTHO05D004209 1.4e-87 327.0 271 58.7
MD12G1091800 Malus domestica HOM05D003833 ORTHO05D004209 6.8e-87 324.7 272 59.2
Rhsim03G0034800 Rhododendron simsii HOM05D003833 ORTHO05D004209 5.7e-86 321.6 483 43.7
RhsimUnG0217200 Rhododendron simsii HOM05D003833 ORTHO05D004209 5.7e-86 321.6 483 43.7
Eucgr.K01625 Eucalyptus grandis HOM05D003833 ORTHO05D004209 8.3e-85 317.8 217 78.3
Zm00001eb141220 Zea mays HOM05D003833 ORTHO05D004209 5.5e-81 305.1 280 58.9
BolC3t20513H Brassica oleracea HOM05D003833 ORTHO05D004209 2.8e-80 302.8 254 63.8
BolC4t23181H Brassica oleracea HOM05D003833 ORTHO05D004209 6.3e-77 291.6 254 63.0
Mapoly0029s0092 Marchantia polymorpha HOM05D003833 ORTHO05D004209 8.3e-77 291.2 264 58.0
SMO337G0103 Selaginella moellendorffii HOM05D003833 ORTHO05D004209 3.2e-76 289.3 261 57.9
C03p82420 Brassica napus HOM05D003833 ORTHO05D004209 4.1e-76 288.9 281 57.3
C03p82400 Brassica napus HOM05D003833 ORTHO05D004209 7.0e-76 288.1 281 57.7
BcaC02g10661 Brassica carinata HOM05D003833 ORTHO05D004209 7.8e-75 284.6 257 61.9
BolC4t24169H Brassica oleracea HOM05D003833 ORTHO05D004209 1.0e-74 284.3 258 62.0
AagrBONN_evm.TU.Sc2ySwM_368.1806 Anthoceros agrestis HOM05D003833 ORTHO05D004209 1.7e-74 283.5 261 57.5
Pp3c10_15650 Physcomitrium patens HOM05D003833 ORTHO05D004209 1.1e-73 280.8 261 56.3
AagrBONN_evm.TU.Sc2ySwM_368.156 Anthoceros agrestis HOM05D003833 ORTHO05D004209 2.5e-73 279.6 261 56.3
BcaC06g33558 Brassica carinata HOM05D003833 ORTHO05D004209 4.3e-73 278.9 281 56.2
BcaC02g11392 Brassica carinata HOM05D003833 ORTHO05D004209 1.6e-72 276.9 281 56.6
C04p16080 Brassica napus HOM05D003833 ORTHO05D004209 1.6e-72 276.9 281 56.9
CBR_g16006 Chara braunii HOM05D003833 ORTHO05D004209 3.1e-71 272.7 274 53.6
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.5e-70 270.4 296 56.4
Duzib056G0002 Durio zibethinus HOM05D003833 ORTHO05D004209 2.2e-69 266.5 259 61.0
Dinv03868 Davidia involucrata HOM05D003833 ORTHO05D004209 4.9e-69 265.4 161 81.4
Cre03.g154550 Chlamydomonas reinhardtii HOM05D003833 ORTHO05D004209 1.1e-65 254.2 262 52.7
BolC6t37672H Brassica oleracea HOM05D003833 ORTHO05D004209 2.8e-64 249.6 227 60.4
C06p25140 Brassica napus HOM05D003833 ORTHO05D004209 3.6e-64 249.2 280 53.6
C04p26360 Brassica napus HOM05D003833 ORTHO05D004209 7.5e-62 241.5 255 54.5
RcHm_v2.0_Chr2g0125021 Rosa chinensis HOM05D003833 ORTHO05D004209 4.6e-59 232.3 137 83.9
MCO05G631 Micromonas commoda HOM05D003833 ORTHO05D004209 1.1e-57 227.6 262 50.4
Rhsim13G0081800 Rhododendron simsii HOM05D003833 ORTHO05D004209 2.8e-56 223.0 269 50.2
BcaC02g10122 Brassica carinata HOM05D003833 ORTHO05D004209 1.5e-54 217.2 250 50.0
BcaC08g44899 Brassica carinata HOM05D003833 ORTHO05D004209 2.4e-52 209.9 268 49.6
BolC3t20511H Brassica oleracea HOM05D003833 ORTHO05D004209 5.4e-52 208.8 131 80.9
Eucgr.K01616 Eucalyptus grandis HOM05D003833 ORTHO05D004209 2.0e-46 190.3 136 72.8
FAN06G3481 Fragaria x ananassa HOM05D003833 ORTHO05D004209 8.4e-45 184.9 161 65.8
SEGI_40635 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 8.4e-45 184.9 131 71.8
MBI03_g45406_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 5.4e-44 182.2 148 63.5
MD12G1094100 Malus domestica HOM05D003833 ORTHO05D004209 6.6e-42 175.3 136 64.0
MCO04G012 Micromonas commoda HOM05D003833 ORTHO05D004209 2.1e-40 170.2 416 34.9
MBI03_g17131_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 3.4e-38 162.9 129 65.1
PRCOL_00005946 Prasinoderma coloniale HOM05D003833 ORTHO05D004209 2.2e-37 160.2 227 44.9
MBI09_g02151_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 8.4e-37 158.3 119 70.6
TAR623G0480 Trochodendron aralioides HOM05D003833 ORTHO05D004209 8.4e-37 158.3 97 80.4
Nn1g08168 Nelumbo nucifera HOM05D003833 ORTHO05D004209 9.9e-30 134.8 141 53.2
Medtr1046s0010 Medicago truncatula HOM05D003833 ORTHO05D004209 1.4e-28 131.0 261 32.2
RcHm_v2.0_Chr2g0125031 Rosa chinensis HOM05D003833 ORTHO05D004209 7.1e-28 128.6 140 54.3
Haze_26946 Corylus avellana HOM05D003833 ORTHO05D004209 1.8e-26 124.0 253 33.2
Haze_27356 Corylus avellana HOM05D003833 ORTHO05D004209 7.4e-25 118.6 286 30.8
FvH4_7g06311 Fragaria vesca HOM05D003833 ORTHO05D004209 4.0e-23 112.8 70 84.3
Aqoxy3G03819 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 3.2e-20 103.2 150 47.3
BcaNung06051 Brassica carinata HOM05D003833 ORTHO05D004209 3.2e-20 103.2 110 53.6
MD12G1091600 Malus domestica HOM05D003833 ORTHO05D004209 6.0e-19 99.0 67 71.6
CBR_g37250 Chara braunii HOM05D003833 ORTHO05D004209 1.6e-16 90.9 69 66.7
MBI10_g20272_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.6e-16 90.9 59 78.0
BolC4t24812H Brassica oleracea HOM05D003833 ORTHO05D004209 4.8e-16 89.4 82 56.1
Oeu050503.1 Olea europaea HOM05D003833 ORTHO05D004209 4.8e-16 89.4 71 66.2
FvH4_7g06312 Fragaria vesca HOM05D003833 ORTHO05D004209 6.2e-16 89.0 53 83.0
BcaC02g08088 Brassica carinata HOM05D003833 ORTHO05D004209 5.3e-15 85.9 52 80.8
BcaC02g11310 Brassica carinata HOM05D003833 ORTHO05D004209 6.9e-15 85.5 52 78.8
C04p17110 Brassica napus HOM05D003833 ORTHO05D004209 6.9e-15 85.5 52 78.8
BolC4t23262H Brassica oleracea HOM05D003833 ORTHO05D004209 6.9e-15 85.5 52 78.8
BolC8t47752H Brassica oleracea HOM05D003833 ORTHO05D004209 1.5e-14 84.3 52 78.8
Gohir.D06G163101 Gossypium hirsutum HOM05D002585 ORTHO05D002917 3.4e-14 83.2 68 60.3
Gorai.011G171800 Gossypium raimondii HOM05D002585 ORTHO05D002917 3.4e-14 83.2 68 60.3
Gohir.D13G165733 Gossypium hirsutum HOM05D002585 ORTHO05D002917 7.6e-14 82.0 68 58.8
C08p09060 Brassica napus HOM05D003833 ORTHO05D004209 2.9e-13 80.1 50 76.0
Gorai.008G052500 Gossypium raimondii HOM05D002585 ORTHO05D002917 8.4e-13 78.6 68 57.4
SGA_v2.0_scaffold44G16671 Striga asiatica HOM05D003833 ORTHO05D004209 6.7e-10 68.9 62 54.8
HanXRQChr08g0208641 Helianthus annuus HOM05D003833 ORTHO05D004209 1.2e-06 58.2 103 39.8
CAN.G102.1 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-06 57.4 52 53.8
SalBow6G3161 Salvia bowleyana HOM05D021775 ORTHO05D004209 3.4e-06 56.6 40 67.5
Gohir.D03G082900 Gossypium hirsutum HOM05D002585 ORTHO05D002917 4.5e-06 56.2 48 60.4


User provided reference genes

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