Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0362571 Lupinus albus HOM05D003575 ORTHO05D003587 6.8e-51 203.8 106 100.0
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 2.5e-21 105.5 93 63.4
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 3.3e-21 105.1 86 66.3
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 1.8e-19 99.4 89 59.6
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 3.1e-19 98.6 89 61.8
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 4.0e-19 98.2 86 59.3
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 5.2e-19 97.8 86 62.8
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 5.2e-19 97.8 86 62.8
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 5.2e-19 97.8 86 62.8
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 8.9e-19 97.1 89 61.8
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 9.8e-18 93.6 83 59.0
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 1.3e-17 93.2 86 58.1
Medtr3g082740 Medicago truncatula HOM05D003575 ORTHO05D003587 2.2e-17 92.4 87 57.5
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 3.7e-17 91.7 87 58.6
TPR.G40538 Trifolium pratense HOM05D003575 ORTHO05D003587 4.9e-17 91.3 87 55.2
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 2.4e-16 89.0 87 52.9
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 9.2e-16 87.0 85 57.6
Dinv21311 Davidia involucrata HOM05D003575 ORTHO05D003587 1.5e-10 69.7 86 43.0
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 1.7e-09 66.2 86 41.9
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 2.2e-09 65.9 86 41.9
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 2.2e-09 65.9 83 44.6
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 4.9e-09 64.7 86 41.9
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 4.9e-09 64.7 84 44.0
RcHm_v2.0_Chr2g0155771 Rosa chinensis HOM05D003575 ORTHO05D003587 1.1e-08 63.5 86 44.2
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 3.2e-08 62.0 90 40.0
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 3.2e-08 62.0 86 43.0
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 3.2e-08 62.0 86 43.0
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 3.2e-08 62.0 86 44.2
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 3.2e-08 62.0 86 38.4
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 7.1e-08 60.8 83 44.6
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 7.1e-08 60.8 83 41.0
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 9.2e-08 60.5 86 43.0
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.2e-08 60.5 86 43.0
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 9.2e-08 60.5 83 44.6
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 9.2e-08 60.5 84 40.5
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 1.6e-07 59.7 86 41.9
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.6e-07 59.7 86 41.9
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.6e-07 59.7 86 41.9
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.6e-07 59.7 86 41.9
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 1.6e-07 59.7 83 39.8
Cc00_g01040 Coffea canephora HOM05D003575 ORTHO05D003587 2.1e-07 59.3 107 35.5
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 2.1e-07 59.3 86 43.0
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 4.6e-07 58.2 86 41.9
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 6.0e-07 57.8 72 41.7
Dinv26594 Davidia involucrata HOM05D000074 ORTHO05D001293 7.8e-07 57.4 77 41.6
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 7.8e-07 57.4 86 40.7
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 1.0e-06 57.0 93 36.6
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 1.0e-06 57.0 99 34.3
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.3e-06 56.6 89 38.2
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.3e-06 56.6 89 38.2
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.7e-06 56.2 89 37.1
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 1.7e-06 56.2 100 39.0
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 3.0e-06 55.5 86 40.7
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 3.9e-06 55.1 84 36.9
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 3.9e-06 55.1 96 38.5
Medtr6g042050 Medicago truncatula HOM05D003575 ORTHO05D003587 3.9e-06 55.1 65 47.7
Hund01540 Selenicereus undatus HOM05D003575 ORTHO05D003587 3.9e-06 55.1 87 41.4
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 3.9e-06 55.1 89 32.6
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 5.1e-06 54.7 88 39.8
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 5.1e-06 54.7 82 40.2
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.6e-06 54.3 86 36.0
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 8.6e-06 53.9 83 38.6


User provided reference genes

Program Settings