Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0362181 Lupinus albus HOM05D006422 ORTHO05D007992 7.9e-115 417.2 216 100.0
Lj5g0012981 Lotus japonicus HOM05D006422 ORTHO05D007992 2.2e-93 345.9 191 88.0
Ca_12880_v3 Cicer arietinum L. HOM05D006422 ORTHO05D007992 8.8e-90 334.0 187 85.0
arahy.Tifrunner.gnm1.ann1.43EIBT Arachis hypogaea HOM05D006422 ORTHO05D007992 1.2e-89 333.6 196 80.6
Psat6g032000 Pisum sativum HOM05D006422 ORTHO05D007992 4.4e-89 331.6 184 85.9
Medtr1g009980 Medicago truncatula HOM05D006422 ORTHO05D007992 7.5e-89 330.9 191 82.7
arahy.Tifrunner.gnm1.ann1.D9GJPD Arachis hypogaea HOM05D006422 ORTHO05D007992 9.8e-89 330.5 196 80.1
Phvul.001G058000 Phaseolus vulgaris HOM05D006422 ORTHO05D007992 1.7e-88 329.7 210 78.6
VMungo0647G2190 Vigna mungo HOM05D006422 ORTHO05D007992 2.2e-88 329.3 194 83.0
TPR.G11997 Trifolium pratense HOM05D006422 ORTHO05D007992 2.8e-88 328.9 191 81.7
Cfa013253 Carpinus fangiana HOM05D006422 ORTHO05D007992 4.2e-84 315.1 187 81.3
Duzib168G1765 Durio zibethinus HOM05D006422 ORTHO05D007992 6.1e-83 311.2 196 74.5
Ciclev10009324m.g Citrus clementina HOM05D006422 ORTHO05D007992 8.0e-83 310.8 186 80.6
CiPaw.07G214400 Carya illinoinensis HOM05D006422 ORTHO05D007992 2.0e-81 306.2 192 78.1
GSVIVG01035544001 Vitis vinifera HOM05D006422 ORTHO05D007992 1.7e-80 303.1 186 78.0
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 2.8e-80 302.4 234 67.1
AUR62020627 Chenopodium quinoa HOM05D006422 ORTHO05D007992 8.3e-80 300.8 192 78.1
COL.COLO4_18610 Corchorus olitorius HOM05D006422 ORTHO05D007992 8.3e-80 300.8 191 75.9
QL12p024696 Quercus lobata HOM05D006422 ORTHO05D007992 1.2e-78 297.0 188 76.6
Dinv10868 Davidia involucrata HOM05D006422 ORTHO05D007992 1.6e-78 296.6 195 74.9
Dinv26550 Davidia involucrata HOM05D006422 ORTHO05D007992 1.6e-78 296.6 195 74.9
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 2.0e-78 296.2 186 74.2
Manes.16G136400 Manihot esculenta HOM05D006422 ORTHO05D007992 2.7e-78 295.8 188 76.6
Nn1g01726 Nelumbo nucifera HOM05D006422 ORTHO05D007992 3.5e-78 295.4 185 77.3
Atru.chr7.2615_Atru.chr7.2616 Acer truncatum HOM05D006422 ORTHO05D007992 4.5e-78 295.0 202 72.8
CANSAT25G0758 Cannabis sativa HOM05D006422 ORTHO05D007992 4.5e-78 295.0 220 67.7
Glyma.17G201600 Glycine max HOM05D006422 ORTHO05D007992 4.5e-78 295.0 196 76.5
Cc04_g09430 Coffea canephora HOM05D006422 ORTHO05D007992 7.7e-78 294.3 187 75.4
PGR042G1463 Punica granatum HOM05D006422 ORTHO05D007992 7.7e-78 294.3 188 75.0
Prupe.1G462100 Prunus persica HOM05D006422 ORTHO05D007992 1.3e-77 293.5 192 73.4
Migut.A00443 Erythranthe guttata HOM05D006422 ORTHO05D007992 1.7e-77 293.1 191 74.9
RcHm_v2.0_Chr6g0312201 Rosa chinensis HOM05D006422 ORTHO05D007992 1.7e-77 293.1 206 69.4
PGSC0003DMG400009533 Solanum tuberosum HOM05D006422 ORTHO05D007992 1.7e-77 293.1 187 76.5
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 2.9e-77 292.4 187 73.3
Potri.006G276400 Populus trichocarpa HOM05D006422 ORTHO05D007992 6.6e-77 291.2 187 76.5
Sabra06G0214100 Salix brachista HOM05D006422 ORTHO05D007992 1.1e-76 290.4 215 70.7
FAN24G2382 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.5e-76 290.0 203 69.0
FvH4_2g30680 Fragaria vesca HOM05D006422 ORTHO05D007992 1.9e-76 289.7 206 68.4
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 2.5e-76 289.3 187 71.7
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 3.3e-76 288.9 186 73.1
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 3.3e-76 288.9 186 73.1
MD15G1109900 Malus domestica HOM05D006422 ORTHO05D007992 3.3e-76 288.9 209 68.4
Eucgr.C02103 Eucalyptus grandis HOM05D006422 ORTHO05D007992 4.3e-76 288.5 188 75.0
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 7.3e-76 287.7 187 71.7
Sc09g0007930 Simmondsia chinensis HOM05D006422 ORTHO05D007992 7.3e-76 287.7 190 72.1
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 9.5e-76 287.3 187 72.2
Solyc08g006160.4 Solanum lycopersicum HOM05D006422 ORTHO05D007992 1.2e-75 287.0 214 69.2
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 2.1e-75 286.2 187 71.7
Sopen08g002130 Solanum pennellii HOM05D006422 ORTHO05D007992 2.1e-75 286.2 214 69.2
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 2.8e-75 285.8 187 71.1
Actinidia03579 Actinidia chinensis HOM05D006422 ORTHO05D007992 4.7e-75 285.0 193 71.5
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 4.7e-75 285.0 187 70.6
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 4.7e-75 285.0 207 68.1
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 6.1e-75 284.6 187 71.1
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 6.1e-75 284.6 187 71.1
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 6.1e-75 284.6 187 71.1
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 6.1e-75 284.6 187 71.1
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 6.1e-75 284.6 187 71.1
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 6.1e-75 284.6 187 71.1
TWI34G0909 Tripterygium wilfordii HOM05D006422 ORTHO05D007992 6.1e-75 284.6 224 67.0
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 8.0e-75 284.3 213 67.6
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 8.0e-75 284.3 213 67.6
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 1.0e-74 283.9 206 67.5
Peaxi162Scf00045g01530 Petunia axillaris HOM05D006422 ORTHO05D007992 2.3e-74 282.7 201 71.1
TAR383G0184 Trochodendron aralioides HOM05D006422 ORTHO05D007992 2.3e-74 282.7 207 68.1
CAN.G1364.3 Capsicum annuum HOM05D006422 ORTHO05D007992 3.0e-74 282.3 211 67.3
DCAR_003025 Daucus carota HOM05D006422 ORTHO05D007992 4.0e-74 282.0 174 78.7
Gohir.D06G108900 Gossypium hirsutum HOM05D006422 ORTHO05D007992 8.9e-74 280.8 207 67.6
Nitab4.5_0000025g0080 Nicotiana tabacum HOM05D006422 ORTHO05D007992 8.9e-74 280.8 210 68.1
Aqoxy5G03915 Aquilegia oxysepala HOM05D006422 ORTHO05D007992 1.2e-73 280.4 207 70.5
FAN27G3442 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.2e-73 280.4 207 68.1
Gorai.010G123700 Gossypium raimondii HOM05D006422 ORTHO05D007992 2.0e-73 279.6 207 67.1
AUR62038756 Chenopodium quinoa HOM05D006422 ORTHO05D007992 3.4e-73 278.9 164 81.7
CDE04G2326 Ceratophyllum demersum HOM05D006422 ORTHO05D007992 5.7e-73 278.1 214 66.4
PSO017G3510 Papaver somniferum HOM05D006422 ORTHO05D007992 5.7e-73 278.1 191 71.7
Gohir.A06G106700 Gossypium hirsutum HOM05D006422 ORTHO05D007992 1.3e-72 276.9 211 67.3
MBI13_g31531_MAGBIO Magnolia biondii HOM05D006422 ORTHO05D007992 1.3e-72 276.9 173 75.1
EL10Ac2g03719 Beta vulgaris HOM05D006422 ORTHO05D007992 1.7e-72 276.6 204 70.1
PSO170G4757 Papaver somniferum HOM05D006422 ORTHO05D007992 2.9e-72 275.8 211 66.8
Rhsim07G0170200 Rhododendron simsii HOM05D006422 ORTHO05D007992 8.3e-72 274.2 193 68.9
ATR0626G032 Amborella trichopoda HOM05D006422 ORTHO05D007992 1.8e-71 273.1 190 70.0
Hma1.2p1_0534F.1_g173720 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 1.8e-71 273.1 205 66.3
HPP92_004705 Vanilla planifolia HOM05D006422 ORTHO05D007992 5.4e-71 271.6 213 66.2
MSTRG.11814 Avicennia marina HOM05D006422 ORTHO05D007992 7.0e-71 271.2 219 64.4
Haze_21696 Corylus avellana HOM05D006422 ORTHO05D007992 9.2e-71 270.8 214 66.4
HanXRQChr13g0412481 Helianthus annuus HOM05D006422 ORTHO05D007992 1.2e-70 270.4 203 66.5
Lsat_1_v5_gn_5_61061 Lactuca sativa HOM05D006422 ORTHO05D007992 7.8e-70 267.7 206 65.0
unitig_748.g7381 Utricularia gibba HOM05D006422 ORTHO05D007992 3.0e-69 265.8 190 67.4
vmacro05107 Vaccinium macrocarpon HOM05D006422 ORTHO05D007992 3.0e-69 265.8 166 74.7
Nitab4.5_0003259g0070 Nicotiana tabacum HOM05D006422 ORTHO05D007992 8.6e-69 264.2 222 64.4
Zm00001eb071430 Zea mays HOM05D006422 ORTHO05D007992 6.2e-67 258.1 176 72.2
Os04g0607000 Oryza sativa ssp. japonica HOM05D006422 ORTHO05D007992 1.2e-65 253.8 176 69.9
SGA_v2.0_scaffold27G11666 Striga asiatica HOM05D006422 ORTHO05D007992 1.5e-65 253.4 199 65.3
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 2.0e-65 253.1 217 62.2
FAN20G1184 Fragaria x ananassa HOM05D006422 ORTHO05D007992 9.8e-65 250.8 185 66.5
Oeu018400.2 Olea europaea HOM05D006422 ORTHO05D007992 1.1e-63 247.3 156 73.1
ECA240G0283 Erigeron canadensis HOM05D000069 ORTHO05D000060 3.5e-62 242.3 177 65.0
CiPaw.08G017800 Carya illinoinensis HOM05D006422 ORTHO05D007992 1.5e-57 226.9 186 66.1
FAN15G3645 Fragaria x ananassa HOM05D006422 ORTHO05D007992 4.4e-57 225.3 169 65.7
SEGI_33970 Sequoiadendron giganteum HOM05D006422 ORTHO05D007992 1.4e-55 220.3 203 54.2
Lj7A749G60 Lonicera japonica HOM05D006422 ORTHO05D007992 1.3e-53 213.8 121 79.3
MELO3C011201.2 Cucumis melo HOM05D006422 ORTHO05D007992 2.8e-51 206.1 157 67.5
Ah.11g043920 Amaranthus hybridus HOM05D006422 ORTHO05D007992 1.2e-49 200.7 189 58.2
AagrBONN_evm.TU.Sc2ySwM_228.4709 Anthoceros agrestis HOM05D006422 ORTHO05D007992 4.4e-49 198.7 173 52.0
Pp3c13_4790 Physcomitrium patens HOM05D006422 ORTHO05D007992 4.9e-48 195.3 192 48.4
SMO364G0843 Selaginella moellendorffii HOM05D006422 ORTHO05D007992 1.1e-47 194.1 165 56.4
CSS0034711 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 4.1e-47 192.2 142 69.7
CSS0017479 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 4.6e-46 188.7 122 74.6
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 2.3e-45 186.4 192 47.4
Hma1.2p1_0534F.1_g173730 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 1.1e-44 184.1 146 65.8
Gorai.002G101300 Gossypium raimondii HOM05D006422 ORTHO05D007992 6.4e-40 168.3 111 71.2
CSS0035518 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 3.4e-33 146.0 137 57.7
CBR_g3792 Chara braunii HOM05D006422 ORTHO05D007992 8.7e-29 131.3 174 39.1
Oeu014126.1 Olea europaea HOM05D006422 ORTHO05D007992 2.4e-26 123.2 92 65.2
MCO15G093 Micromonas commoda HOM05D006422 ORTHO05D007992 3.0e-21 106.3 202 35.1
Cre12.g502250 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 1.9e-20 103.6 222 33.8
PRCOL_00004658 Prasinoderma coloniale HOM05D006422 ORTHO05D007992 4.0e-18 95.9 199 33.7
Cre07.g325736 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 4.9e-16 89.0 214 28.0
Hund19396 Selenicereus undatus HOM05D006422 ORTHO05D007992 5.5e-15 85.5 71 63.4
MELO3C010097.2 Cucumis melo HOM05D003483 ORTHO05D004101 1.6e-06 57.4 175 24.0
PSO017G4111 Papaver somniferum HOM05D003483 ORTHO05D004101 4.6e-06 55.8 232 26.7
CsaV3_1G045010 Cucumis sativus L. HOM05D003483 ORTHO05D004101 7.9e-06 55.1 175 24.0


User provided reference genes

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