Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr13g0303991 Lupinus albus HOM05D003956 ORTHO05D004850 0.0e+00 1818.5 921 100.0
Glyma.07G253700 Glycine max HOM05D003956 ORTHO05D004850 0.0e+00 1607.0 930 86.9
Lj4g0014830 Lotus japonicus HOM05D003956 ORTHO05D004850 0.0e+00 1596.3 924 86.5
Glyma.17G020600 Glycine max HOM05D003956 ORTHO05D004850 0.0e+00 1592.0 933 86.1
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 0.0e+00 1586.6 902 88.0
Phvul.003G098200 Phaseolus vulgaris HOM05D003956 ORTHO05D004850 0.0e+00 1584.7 927 86.2
TPR.G28132 Trifolium pratense HOM05D003956 ORTHO05D004850 0.0e+00 1584.3 911 87.4
VMungo1215G0684 Vigna mungo HOM05D003956 ORTHO05D004850 0.0e+00 1582.0 928 86.0
CiPaw.01G156600 Carya illinoinensis HOM05D003956 ORTHO05D004850 0.0e+00 1541.6 893 85.7
Atru.chr4.2704 Acer truncatum HOM05D003956 ORTHO05D004850 0.0e+00 1538.1 893 85.3
Gorai.011G181800 Gossypium raimondii HOM05D003956 ORTHO05D004850 0.0e+00 1536.9 891 85.1
Dinv44455 Davidia involucrata HOM05D003956 ORTHO05D004850 0.0e+00 1534.6 893 85.2
Manes.03G188300 Manihot esculenta HOM05D003956 ORTHO05D004850 0.0e+00 1531.9 901 84.9
PGR004G0287 Punica granatum HOM05D003956 ORTHO05D004850 0.0e+00 1531.5 891 85.6
Gohir.D10G162900 Gossypium hirsutum HOM05D003956 ORTHO05D004850 0.0e+00 1530.8 891 84.8
Psat0ss7919g0200 Pisum sativum HOM05D003956 ORTHO05D004850 0.0e+00 1530.8 858 88.8
CsaV3_3G013930 Cucumis sativus L. HOM05D003956 ORTHO05D004850 0.0e+00 1528.5 890 85.3
Ciclev10006837m.g Citrus clementina HOM05D003956 ORTHO05D004850 0.0e+00 1526.5 910 83.6
Eucgr.H03642 Eucalyptus grandis HOM05D003956 ORTHO05D004850 0.0e+00 1526.5 896 84.0
Cfa015539 Carpinus fangiana HOM05D003956 ORTHO05D004850 0.0e+00 1526.1 893 85.6
arahy.Tifrunner.gnm1.ann1.EQKV61 Arachis hypogaea HOM05D003956 ORTHO05D004850 0.0e+00 1525.8 937 83.7
Duzib212G0153 Durio zibethinus HOM05D003956 ORTHO05D004850 0.0e+00 1525.8 905 83.8
QL06p006231 Quercus lobata HOM05D003956 ORTHO05D004850 0.0e+00 1524.6 904 84.3
Prupe.1G146600 Prunus persica HOM05D003956 ORTHO05D004850 0.0e+00 1524.2 892 84.4
Rhsim04G0213100 Rhododendron simsii HOM05D003956 ORTHO05D004850 0.0e+00 1523.5 892 84.5
TAR365G1004 Trochodendron aralioides HOM05D003956 ORTHO05D004850 0.0e+00 1523.5 891 84.8
GSVIVG01017850001 Vitis vinifera HOM05D003956 ORTHO05D004850 0.0e+00 1521.1 891 84.3
Nitab4.5_0000059g0230 Nicotiana tabacum HOM05D003956 ORTHO05D004850 0.0e+00 1517.3 908 83.6
Nn3g21184 Nelumbo nucifera HOM05D003956 ORTHO05D004850 0.0e+00 1516.9 900 83.2
Haze_01011 Corylus avellana HOM05D003956 ORTHO05D004850 0.0e+00 1515.4 895 85.0
CANSAT78G1736 Cannabis sativa HOM05D003956 ORTHO05D004850 0.0e+00 1515.0 916 82.1
Sed0002405 Sechium edule HOM05D003956 ORTHO05D004850 0.0e+00 1515.0 890 84.5
TWI09G0935 Tripterygium wilfordii HOM05D003956 ORTHO05D004850 0.0e+00 1514.2 892 84.6
Actinidia23451 Actinidia chinensis HOM05D003956 ORTHO05D004850 0.0e+00 1513.8 894 83.6
Peaxi162Scf00095g00414 Petunia axillaris HOM05D003956 ORTHO05D004850 0.0e+00 1512.3 897 83.6
arahy.Tifrunner.gnm1.ann1.YQ8C5N Arachis hypogaea HOM05D003956 ORTHO05D004850 0.0e+00 1510.4 890 86.0
Actinidia40209 Actinidia chinensis HOM05D003956 ORTHO05D004850 0.0e+00 1504.2 894 83.4
Cc03_g02730 Coffea canephora HOM05D003956 ORTHO05D004850 0.0e+00 1503.0 894 83.6
FvH4_4g16670 Fragaria vesca HOM05D003956 ORTHO05D004850 0.0e+00 1501.5 894 82.6
Nn4g26122 Nelumbo nucifera HOM05D003956 ORTHO05D004850 0.0e+00 1501.5 874 85.4
Potri.010G027800 Populus trichocarpa HOM05D003956 ORTHO05D004850 0.0e+00 1501.5 885 84.4
Aqoxy2G03183 Aquilegia oxysepala HOM05D003956 ORTHO05D004850 0.0e+00 1500.7 894 83.4
ECA240G3955 Erigeron canadensis HOM05D003956 ORTHO05D004850 0.0e+00 1500.7 909 81.7
Nitab4.5_0010477g0010 Nicotiana tabacum HOM05D003956 ORTHO05D004850 0.0e+00 1498.8 923 81.5
CAN.G889.10 Capsicum annuum HOM05D003956 ORTHO05D004850 0.0e+00 1498.0 892 84.1
FAN22G1243 Fragaria x ananassa HOM05D003956 ORTHO05D004850 0.0e+00 1497.3 894 82.6
MD13G1177500 Malus domestica HOM05D003956 ORTHO05D004850 0.0e+00 1494.9 927 80.8
RcHm_v2.0_Chr4g0420131 Rosa chinensis HOM05D003956 ORTHO05D004850 0.0e+00 1494.9 895 82.1
FAN12G0499 Fragaria x ananassa HOM05D003956 ORTHO05D004850 0.0e+00 1493.4 904 81.6
FAN12G2270 Fragaria x ananassa HOM05D003956 ORTHO05D004850 0.0e+00 1493.4 904 81.6
CSS0033563 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 0.0e+00 1491.9 875 84.2
Cpa.g.sc16.74 Carica papaya HOM05D003956 ORTHO05D004850 0.0e+00 1491.9 891 82.8
Hund20662 Selenicereus undatus HOM05D003956 ORTHO05D004850 0.0e+00 1491.5 892 82.6
Sopen01g032260 Solanum pennellii HOM05D003956 ORTHO05D004850 0.0e+00 1491.5 936 80.0
Migut.G00282 Erythranthe guttata HOM05D003956 ORTHO05D004850 0.0e+00 1491.1 881 83.4
FAN17G1489 Fragaria x ananassa HOM05D003956 ORTHO05D004850 0.0e+00 1489.9 904 81.6
MD16G1179500 Malus domestica HOM05D003956 ORTHO05D004850 0.0e+00 1489.9 898 82.6
Solyc01g080460.3 Solanum lycopersicum HOM05D003956 ORTHO05D004850 0.0e+00 1489.9 936 79.9
arahy.Tifrunner.gnm1.ann1.I3NY02 Arachis hypogaea HOM05D003956 ORTHO05D004850 0.0e+00 1488.4 902 82.9
MD13G1177400 Malus domestica HOM05D003956 ORTHO05D004850 0.0e+00 1486.5 882 83.8
FAN07G1911 Fragaria x ananassa HOM05D003956 ORTHO05D004850 0.0e+00 1486.1 907 81.3
Aa31LG9G1910 Aethionema arabicum HOM05D003956 ORTHO05D004850 0.0e+00 1480.7 889 81.9
Sabra10G0012900 Salix brachista HOM05D003956 ORTHO05D004850 0.0e+00 1474.9 889 82.6
Lsat_1_v5_gn_5_51481 Lactuca sativa HOM05D003956 ORTHO05D004850 0.0e+00 1473.8 873 83.2
THA.LOC104820228 Tarenaya hassleriana HOM05D003956 ORTHO05D004850 0.0e+00 1470.7 891 80.8
MELO3C006585.2 Cucumis melo HOM05D003956 ORTHO05D004850 0.0e+00 1469.1 844 85.9
QL06p005921 Quercus lobata HOM05D003956 ORTHO05D004850 0.0e+00 1464.1 873 82.5
MSTRG.10031 Avicennia marina HOM05D003956 ORTHO05D004850 0.0e+00 1461.0 874 82.4
ATR0626G228 Amborella trichopoda HOM05D003956 ORTHO05D004850 0.0e+00 1459.9 877 81.3
SGA_v2.0_scaffold142G35643 Striga asiatica HOM05D003956 ORTHO05D004850 0.0e+00 1459.5 897 82.5
Lj3C806G12 Lonicera japonica HOM05D003956 ORTHO05D004850 0.0e+00 1459.1 893 81.7
CARHR222330 Cardamine hirsuta HOM05D003956 ORTHO05D004850 0.0e+00 1458.7 892 81.2
PSO302G0065 Papaver somniferum HOM05D003956 ORTHO05D004850 0.0e+00 1456.4 874 81.6
AL7G39990 Arabidopsis lyrata HOM05D003956 ORTHO05D004850 0.0e+00 1455.7 913 79.2
MSTRG.10030 Avicennia marina HOM05D003956 ORTHO05D004850 0.0e+00 1455.7 880 81.7
Thhalv10024330m.g Eutrema salsugineum HOM05D003956 ORTHO05D004850 0.0e+00 1454.1 892 80.8
Sp7g13780 Schrenkiella parvula HOM05D003956 ORTHO05D004850 0.0e+00 1453.7 893 80.5
PSO170G3340 Papaver somniferum HOM05D003956 ORTHO05D004850 0.0e+00 1453.3 874 81.6
AT4G15530 Arabidopsis thaliana HOM05D003956 ORTHO05D004850 0.0e+00 1451.8 893 80.2
Duzib151G0049 Durio zibethinus HOM05D003956 ORTHO05D004850 0.0e+00 1451.4 862 83.1
Sc25g0004550 Simmondsia chinensis HOM05D003956 ORTHO05D004850 0.0e+00 1451.0 858 83.2
CDE08G0632 Ceratophyllum demersum HOM05D003956 ORTHO05D004850 0.0e+00 1450.3 876 80.8
Os05g0405000 Oryza sativa ssp. japonica HOM05D003956 ORTHO05D004850 0.0e+00 1449.9 913 78.6
SalBow2G1708 Salvia bowleyana HOM05D003956 ORTHO05D004850 0.0e+00 1449.9 874 82.4
BcaNung00266 Brassica carinata HOM05D003956 ORTHO05D004850 0.0e+00 1448.3 892 79.8
BraA03t14011Z Brassica rapa HOM05D003956 ORTHO05D004850 0.0e+00 1448.0 894 79.9
Thecc.04G272600 Theobroma cacao HOM05D003956 ORTHO05D004850 0.0e+00 1446.4 864 83.2
A01p22040 Brassica napus HOM05D003956 ORTHO05D004850 0.0e+00 1445.3 891 79.8
BraA01t02110Z Brassica rapa HOM05D003956 ORTHO05D004850 0.0e+00 1445.3 891 79.8
C01p27430 Brassica napus HOM05D003956 ORTHO05D004850 0.0e+00 1444.5 891 79.7
BcaC06g32940 Brassica carinata HOM05D003956 ORTHO05D004850 0.0e+00 1443.3 894 79.4
C07p47210 Brassica napus HOM05D003956 ORTHO05D004850 0.0e+00 1442.9 894 79.3
MD16G1179300 Malus domestica HOM05D003956 ORTHO05D004850 0.0e+00 1440.2 857 83.4
PGSC0003DMG400032107 Solanum tuberosum HOM05D003956 ORTHO05D004850 0.0e+00 1439.5 843 84.6
BolC7t45243H Brassica oleracea HOM05D003956 ORTHO05D004850 0.0e+00 1439.1 894 79.1
Duzib151G0209 Durio zibethinus HOM05D003956 ORTHO05D004850 0.0e+00 1438.7 873 81.1
Thecc.04G272800 Theobroma cacao HOM05D003956 ORTHO05D004850 0.0e+00 1437.2 875 80.9
BolC1t02682H Brassica oleracea HOM05D003956 ORTHO05D004850 0.0e+00 1435.2 898 79.1
Zm00001eb349810 Zea mays HOM05D003956 ORTHO05D004850 0.0e+00 1434.1 877 80.5
BcaC09g50248 Brassica carinata HOM05D003956 ORTHO05D004850 0.0e+00 1432.5 873 80.5
A03p49170 Brassica napus HOM05D003956 ORTHO05D004850 0.0e+00 1429.5 880 79.8
DCAR_023283 Daucus carota HOM05D003956 ORTHO05D004850 0.0e+00 1429.5 891 80.6
Hma1.2p1_0511F.1_g169230 Hydrangea macrophylla HOM05D003956 ORTHO05D004850 0.0e+00 1425.2 880 80.9
CDE02G0811 Ceratophyllum demersum HOM05D003956 ORTHO05D004850 0.0e+00 1424.8 893 78.9
MD16G1179400 Malus domestica HOM05D003956 ORTHO05D004850 0.0e+00 1423.7 857 82.7
Carub.0007s2635 Capsella rubella HOM05D003956 ORTHO05D004850 0.0e+00 1415.2 858 80.8
Hund19586 Selenicereus undatus HOM05D003956 ORTHO05D004850 0.0e+00 1395.9 844 80.9
Mapoly0009s0124 Marchantia polymorpha HOM05D003956 ORTHO05D004850 0.0e+00 1395.6 890 76.6
arahy.Tifrunner.gnm1.ann1.DC6B04 Arachis hypogaea HOM05D003956 ORTHO05D004850 0.0e+00 1392.9 902 78.7
ClCG05G005590 Citrullus lanatus HOM05D003956 ORTHO05D004850 0.0e+00 1392.1 879 80.1
AagrBONN_evm.TU.Sc2ySwM_228.3276 Anthoceros agrestis HOM05D003956 ORTHO05D004850 0.0e+00 1390.9 914 74.2
EL10Ac1g01820 Beta vulgaris HOM05D003956 ORTHO05D004850 0.0e+00 1390.6 907 77.7
vmacro08238 Vaccinium macrocarpon HOM05D003956 ORTHO05D004850 0.0e+00 1388.6 1006 71.5
PGR031G3666 Punica granatum HOM05D003956 ORTHO05D004850 0.0e+00 1383.2 866 79.0
SMO351G0542 Selaginella moellendorffii HOM05D003956 ORTHO05D004850 0.0e+00 1378.6 872 76.9
Ah.11g043140 Amaranthus hybridus HOM05D003956 ORTHO05D004850 0.0e+00 1377.1 880 78.3
Psat4g028880 Pisum sativum HOM05D003956 ORTHO05D004850 0.0e+00 1367.1 803 83.9
Pp3c5_22540 Physcomitrium patens HOM05D003956 ORTHO05D004850 0.0e+00 1364.7 889 75.0
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 0.0e+00 1357.4 882 77.9
Eucgr.B01186 Eucalyptus grandis HOM05D003956 ORTHO05D004850 0.0e+00 1343.9 823 80.7
unitig_26.g8936 Utricularia gibba HOM05D003956 ORTHO05D004850 0.0e+00 1342.8 874 78.6
Actinidia32373 Actinidia chinensis HOM05D003956 ORTHO05D004850 0.0e+00 1335.9 877 77.1
Oeu032695.1 Olea europaea HOM05D003956 ORTHO05D004850 0.0e+00 1333.9 774 84.9
CSS0013368 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 0.0e+00 1298.5 803 81.1
Gohir.A10G105700 Gossypium hirsutum HOM05D003956 ORTHO05D004850 0.0e+00 1265.4 733 84.9
CSS0018237 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 0.0e+00 1260.4 886 74.2
Hma1.2p1_2025F.1_g311530 Hydrangea macrophylla HOM05D003956 ORTHO05D004850 0.0e+00 1245.0 880 73.2
vmacro15287 Vaccinium macrocarpon HOM05D003956 ORTHO05D004850 0.0e+00 1231.9 875 72.3
Zm00001eb287770 Zea mays HOM05D003956 ORTHO05D004850 0.0e+00 1221.5 730 82.3
TPR.G28133 Trifolium pratense HOM05D003956 ORTHO05D004850 0.0e+00 1218.8 874 71.9
BcaC09g50243 Brassica carinata HOM05D003956 ORTHO05D004850 0.0e+00 1195.6 779 76.3
MCO12G211 Micromonas commoda HOM05D003956 ORTHO05D004850 0.0e+00 1174.8 857 67.7
Cre17.g734548 Chlamydomonas reinhardtii HOM05D003956 ORTHO05D004850 0.0e+00 1162.5 903 65.0
unitig_749.g14056 Utricularia gibba HOM05D003956 ORTHO05D004850 0.0e+00 1086.6 633 84.8
Cre10.g424750 Chlamydomonas reinhardtii HOM05D003956 ORTHO05D004850 1.8e-304 1049.3 883 61.0
Migut.G00280 Erythranthe guttata HOM05D003956 ORTHO05D004850 3.2e-293 1011.9 581 85.2
Medtr4g118350 Medicago truncatula HOM05D003956 ORTHO05D004850 1.3e-281 973.4 604 80.6
MCO01G687 Micromonas commoda HOM05D003956 ORTHO05D004850 1.1e-261 907.1 909 54.3
AUR62034950 Chenopodium quinoa HOM05D003956 ORTHO05D004850 1.3e-212 744.2 473 78.2
AUR62035455 Chenopodium quinoa HOM05D003956 ORTHO05D004850 4.5e-210 735.7 460 79.3
AUR62035456 Chenopodium quinoa HOM05D003956 ORTHO05D004850 2.3e-206 723.4 504 74.2
CBR_g50184 Chara braunii HOM05D003956 ORTHO05D004850 9.0e-187 658.3 744 49.6
AUR62034949 Chenopodium quinoa HOM05D003956 ORTHO05D004850 1.3e-185 654.4 450 73.8
HanXRQChr03g0080571 Helianthus annuus HOM05D003956 ORTHO05D004850 1.6e-183 647.5 397 81.9
SGA_v2.0_scaffold86G26866 Striga asiatica HOM05D003956 ORTHO05D004850 3.1e-163 580.1 467 66.6
BcaC06g33414 Brassica carinata HOM05D003956 ORTHO05D004850 1.4e-158 564.7 338 81.7
Medtr4g118355 Medicago truncatula HOM05D003956 ORTHO05D004850 5.0e-145 519.6 296 86.8
SGA_v2.0_scaffold86G26865 Striga asiatica HOM05D003956 ORTHO05D004850 5.2e-134 483.0 391 64.7
arahy.Tifrunner.gnm1.ann1.9WT78J Arachis hypogaea HOM05D003956 ORTHO05D004850 1.1e-112 412.1 319 69.9
AUR62034328 Chenopodium quinoa HOM05D003956 ORTHO05D004850 3.5e-106 390.6 423 51.8
arahy.Tifrunner.gnm1.ann1.HZTZ4X Arachis hypogaea HOM05D003956 ORTHO05D004850 1.1e-94 352.4 258 71.3
HanXRQChr16g0518081 Helianthus annuus HOM05D003956 ORTHO05D004850 3.8e-92 344.0 232 75.9
arahy.Tifrunner.gnm1.ann1.7LSJ4G Arachis hypogaea HOM05D003956 ORTHO05D004850 4.8e-71 273.9 220 68.2
arahy.Tifrunner.gnm1.ann1.989M5Y Arachis hypogaea HOM05D003956 ORTHO05D004850 2.9e-68 264.6 216 65.3
unitig_749.g14057 Utricularia gibba HOM05D003956 ORTHO05D004850 7.9e-58 229.9 151 76.8
AagrBONN_evm.TU.Sc2ySwM_362.937 Anthoceros agrestis HOM05D003956 ORTHO05D004850 2.3e-49 201.8 119 80.7
arahy.Tifrunner.gnm1.ann1.S9XVUY Arachis hypogaea HOM05D003956 ORTHO05D004850 1.0e-44 186.4 268 44.8
Pp3c6_6540 Physcomitrium patens HOM05D003956 ORTHO05D004850 3.6e-34 151.4 114 66.7
arahy.Tifrunner.gnm1.ann1.LGH8AH Arachis hypogaea HOM05D003956 ORTHO05D004850 1.4e-30 139.4 83 81.9
Lsat_1_v5_gn_2_81921 Lactuca sativa HOM05D005278 ORTHO05D006500 3.1e-30 138.3 90 72.2
BcaC09g50244 Brassica carinata HOM05D003956 ORTHO05D004850 1.9e-27 129.0 84 75.0
GSVIVG01018502001 Vitis vinifera HOM05D003956 ORTHO05D004850 5.5e-27 127.5 80 77.5
arahy.Tifrunner.gnm1.ann1.G5444S Arachis hypogaea HOM05D003956 ORTHO05D004850 9.5e-27 126.7 95 70.5
Pp3s196_40 Physcomitrium patens HOM05D003956 ORTHO05D044360 4.0e-25 121.3 451 26.8
QL06p005983 Quercus lobata HOM05D003956 ORTHO05D004850 2.0e-24 119.0 130 53.8
TPR.G26738 Trifolium pratense HOM05D003956 ORTHO05D000576 2.3e-20 105.5 56 87.5
TPR.G35464 Trifolium pratense HOM05D003956 ORTHO05D004850 8.9e-17 93.6 59 72.9
MBI15_g32557_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 2.3e-12 79.0 57 70.2
arahy.Tifrunner.gnm1.ann1.57CL3B Arachis hypogaea HOM05D003956 ORTHO05D004850 9.5e-11 73.6 51 70.6
arahy.Tifrunner.gnm1.ann1.V4Y3U4 Arachis hypogaea HOM05D003956 ORTHO05D004850 9.5e-11 73.6 48 75.0
arahy.Tifrunner.gnm1.ann1.GGZS5I Arachis hypogaea HOM05D003956 ORTHO05D004850 6.2e-10 70.9 43 81.4
SGA_v2.0_scaffold86G26869 Striga asiatica HOM05D000924 ORTHO05D001209 1.8e-09 69.3 48 72.9
Nn8g40271 Nelumbo nucifera HOM05D001541 ORTHO05D001465 2.3e-09 68.9 36 83.3
Pp3c5_22980 Physcomitrium patens HOM05D003956 ORTHO05D004850 7.5e-08 63.9 43 67.4


User provided reference genes

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