Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr13g0302991 Lupinus albus HOM05D002953 ORTHO05D003249 2.3e-134 482.3 247 100.0
arahy.Tifrunner.gnm1.ann1.90GC30 Arachis hypogaea HOM05D002953 ORTHO05D003249 7.0e-67 258.1 262 58.4
Glyma.17G076300 Glycine max HOM05D002953 ORTHO05D003249 1.5e-64 250.4 267 56.9
Glyma.05G023400 Glycine max HOM05D002953 ORTHO05D003249 1.9e-59 233.4 266 55.3
Lj1g0024895 Lotus japonicus HOM05D002953 ORTHO05D003249 4.0e-46 189.1 265 48.7
Glyma.06G199700 Glycine max HOM05D002953 ORTHO05D003249 2.7e-42 176.4 258 47.3
Psat5g198520 Pisum sativum HOM05D002953 ORTHO05D003249 1.8e-38 163.7 259 44.0
Medtr3g023650 Medicago truncatula HOM05D002953 ORTHO05D003249 9.0e-38 161.4 259 43.2
arahy.Tifrunner.gnm1.ann1.52HBJM Arachis hypogaea HOM05D002953 ORTHO05D003249 1.2e-29 134.4 217 46.5
arahy.Tifrunner.gnm1.ann1.K4MPXF Arachis hypogaea HOM05D002953 ORTHO05D003249 1.5e-29 134.0 217 45.6
Prupe.5G200200 Prunus persica HOM05D002953 ORTHO05D003249 4.5e-29 132.5 240 41.2
RcHm_v2.0_Chr7g0182351 Rosa chinensis HOM05D002953 ORTHO05D003249 5.5e-27 125.6 232 40.9
QL10p018596 Quercus lobata HOM05D002953 ORTHO05D003249 1.6e-26 124.0 272 38.2
Phvul.003G186800 Phaseolus vulgaris HOM05D002953 ORTHO05D003249 3.5e-26 122.9 185 50.3
TAR622G0728 Trochodendron aralioides HOM05D002953 ORTHO05D003249 8.7e-25 118.2 271 36.5
Ciclev10024374m.g Citrus clementina HOM05D002953 ORTHO05D003249 1.5e-24 117.5 227 38.3
FvH4_5g14350 Fragaria vesca HOM05D002953 ORTHO05D003249 1.9e-24 117.1 237 40.1
Potri.015G049700 Populus trichocarpa HOM05D002953 ORTHO05D003249 1.9e-24 117.1 220 39.1
CsaV3_1G005800 Cucumis sativus L. HOM05D002953 ORTHO05D003249 1.3e-23 114.4 281 34.9
GSVIVG01007915001 Vitis vinifera HOM05D002953 ORTHO05D003249 1.6e-23 114.0 221 40.3
TPR.G12280 Trifolium pratense HOM05D002953 ORTHO05D003249 6.9e-22 108.6 193 39.9
Atru.chr9.285 Acer truncatum HOM05D002953 ORTHO05D003249 9.0e-22 108.2 284 35.9
MD06G1199500 Malus domestica HOM05D002953 ORTHO05D003249 9.0e-22 108.2 224 39.3
Glyma.04G164800 Glycine max HOM05D002953 ORTHO05D003249 2.0e-21 107.1 151 49.7
Manes.14G083400 Manihot esculenta HOM05D002953 ORTHO05D003249 1.7e-20 104.0 237 35.4
MELO3C002011.2 Cucumis melo HOM05D002953 ORTHO05D003249 3.8e-20 102.8 217 35.5
ClCG04G011980 Citrullus lanatus HOM05D002953 ORTHO05D003249 6.5e-20 102.1 207 39.1
COL.COLO4_36882 Corchorus olitorius HOM05D002953 ORTHO05D003249 6.5e-20 102.1 247 35.2
Haze_07674 Corylus avellana HOM05D002953 ORTHO05D003249 1.4e-19 100.9 249 37.8
Actinidia19011 Actinidia chinensis HOM05D002953 ORTHO05D003249 5.5e-19 99.0 263 34.6
Hma1.2p1_0060F.1_g033360 Hydrangea macrophylla HOM05D002953 ORTHO05D003249 9.3e-19 98.2 210 34.8
Sed0013431 Sechium edule HOM05D002953 ORTHO05D003249 9.3e-19 98.2 276 32.6
CANSAT80G2766 Cannabis sativa HOM05D002953 ORTHO05D003249 2.7e-18 96.7 214 35.5
Sp2g24510 Schrenkiella parvula HOM05D002953 ORTHO05D003249 1.0e-17 94.7 266 32.7
FAN13G1454 Fragaria x ananassa HOM05D000627 ORTHO05D000365 2.3e-17 93.6 212 39.2
PGR083G0095 Punica granatum HOM05D002953 ORTHO05D003249 2.3e-17 93.6 262 35.1
FAN18G4303 Fragaria x ananassa HOM05D000627 ORTHO05D000365 3.0e-17 93.2 229 38.0
AUR62008487 Chenopodium quinoa HOM05D002953 ORTHO05D003249 5.1e-17 92.4 255 30.6
FAN08G1545 Fragaria x ananassa HOM05D002953 ORTHO05D000365 6.7e-17 92.0 212 39.6
Sed0010847 Sechium edule HOM05D002953 ORTHO05D003249 6.7e-17 92.0 227 35.7
Gohir.A12G180300 Gossypium hirsutum HOM05D002953 ORTHO05D003249 8.7e-17 91.7 225 35.1
Cc00_g02220 Coffea canephora HOM05D002953 ORTHO05D003249 1.5e-16 90.9 206 37.4
Thecc.03G096500 Theobroma cacao HOM05D002953 ORTHO05D003249 1.9e-16 90.5 220 35.0
DCAR_026019 Daucus carota HOM05D002953 ORTHO05D003249 2.5e-16 90.1 253 33.2
Sabra15G0078200 Salix brachista HOM05D002953 ORTHO05D003249 2.5e-16 90.1 233 34.8
AL8G37940 Arabidopsis lyrata HOM05D002953 ORTHO05D003249 4.3e-16 89.4 266 32.0
CARHR275030 Cardamine hirsuta HOM05D002953 ORTHO05D003249 7.4e-16 88.6 264 30.7
Gorai.008G196300 Gossypium raimondii HOM05D002953 ORTHO05D003249 7.4e-16 88.6 225 34.7
Rhsim12G0152800 Rhododendron simsii HOM05D002953 ORTHO05D003249 1.3e-15 87.8 205 36.1
Oeu032216.1 Olea europaea HOM05D002953 ORTHO05D003249 1.6e-15 87.4 205 35.1
Gohir.D12G183000 Gossypium hirsutum HOM05D002953 ORTHO05D003249 2.1e-15 87.0 225 34.2
Rhsim12G0152900 Rhododendron simsii HOM05D002953 ORTHO05D003249 3.7e-15 86.3 205 36.1
CiPaw.11G049300 Carya illinoinensis HOM05D002953 ORTHO05D003249 6.3e-15 85.5 291 31.3
MD14G1208100 Malus domestica HOM05D002953 ORTHO05D003249 8.2e-15 85.1 230 34.8
Eucgr.B00564 Eucalyptus grandis HOM05D002953 ORTHO05D003249 1.4e-14 84.3 270 32.2
AT5G61280 Arabidopsis thaliana HOM05D002953 ORTHO05D003249 4.1e-14 82.8 266 31.6
CSS0035960 Camellia sinensis var. sinensis HOM05D002953 ORTHO05D003249 5.3e-14 82.4 211 36.5
EL10Ac5g11089 Beta vulgaris HOM05D002953 ORTHO05D003249 6.9e-14 82.0 270 30.4
TWI81G0838 Tripterygium wilfordii HOM05D002953 ORTHO05D003249 6.9e-14 82.0 214 33.6
Nn4g23349 Nelumbo nucifera HOM05D002953 ORTHO05D003249 9.0e-14 81.6 327 29.7
Ah.11g048070 Amaranthus hybridus HOM05D002953 ORTHO05D003249 1.2e-13 81.3 223 31.8
ECA232G4309 Erigeron canadensis HOM05D002953 ORTHO05D003249 1.5e-13 80.9 249 31.3
TAR629G0224 Trochodendron aralioides HOM05D002953 ORTHO05D003249 2.0e-13 80.5 207 37.2
Peaxi162Scf00013g00538 Petunia axillaris HOM05D002953 ORTHO05D003249 4.5e-13 79.3 204 33.8
SGA_v2.0_scaffold28G11759 Striga asiatica HOM05D004749 ORTHO05D005995 7.6e-13 78.6 204 33.8
BcaC06g33225 Brassica carinata HOM05D002953 ORTHO05D003249 1.7e-12 77.4 230 31.7
Nn3g17381 Nelumbo nucifera HOM05D002953 ORTHO05D003249 1.7e-12 77.4 150 38.7
Sc10g0009790 Simmondsia chinensis HOM05D002953 ORTHO05D003249 6.5e-12 75.5 217 32.3
TAR371G0440 Trochodendron aralioides HOM05D002953 ORTHO05D003249 1.1e-11 74.7 325 28.9
Solyc06g069590.3 Solanum lycopersicum HOM05D002953 ORTHO05D003249 1.4e-11 74.3 215 34.0
CAN.G587.22 Capsicum annuum HOM05D002953 ORTHO05D003249 1.9e-11 73.9 209 34.9
THA.LOC104818328 Tarenaya hassleriana HOM05D002953 ORTHO05D003249 1.9e-11 73.9 232 30.2
Nitab4.5_0001688g0010 Nicotiana tabacum HOM05D002953 ORTHO05D003249 4.2e-11 72.8 204 33.3
SalBow5G1999 Salvia bowleyana HOM05D002953 ORTHO05D003249 5.5e-11 72.4 208 33.2
CSS0004001 Camellia sinensis var. sinensis HOM05D002953 ORTHO05D003249 9.3e-11 71.6 277 30.0
QL03p071046 Quercus lobata HOM05D002953 ORTHO05D003249 1.6e-10 70.9 314 26.1
Sopen06g026890 Solanum pennellii HOM05D002953 ORTHO05D003249 2.1e-10 70.5 209 33.0
BcaC06g33164 Brassica carinata HOM05D002953 ORTHO05D003249 2.7e-10 70.1 236 29.7
HanXRQChr02g0035641 Helianthus annuus HOM05D002953 ORTHO05D003249 2.7e-10 70.1 249 30.5
TWI75G0656 Tripterygium wilfordii HOM05D002953 ORTHO05D003249 6.1e-10 68.9 252 28.6
Glyma.01G056000 Glycine max HOM05D002953 ORTHO05D003249 1.0e-09 68.2 277 28.2
Nitab4.5_0006673g0090 Nicotiana tabacum HOM05D002953 ORTHO05D003249 1.0e-09 68.2 110 41.8
BcaC06g33224 Brassica carinata HOM05D002953 ORTHO05D000365 3.0e-09 66.6 205 31.7
Sabra10G0122400 Salix brachista HOM05D002953 ORTHO05D003249 3.0e-09 66.6 301 28.2
Migut.I00340 Erythranthe guttata HOM05D002953 ORTHO05D003249 6.7e-09 65.5 118 38.1
Duzib068G0795 Durio zibethinus HOM05D002953 ORTHO05D003249 1.1e-08 64.7 141 35.5
Glyma.02G114300 Glycine max HOM05D002953 ORTHO05D003249 1.1e-08 64.7 263 28.5
Ciclev10033969m.g Citrus clementina HOM05D002953 ORTHO05D003249 3.3e-08 63.2 127 37.0
VMungo1215G1853 Vigna mungo HOM05D002953 ORTHO05D003249 3.3e-08 63.2 290 27.6
Thhalv10004785m.g Eutrema salsugineum HOM05D002953 ORTHO05D003249 4.3e-08 62.8 270 27.8
Lj6C782G17 Lonicera japonica HOM05D002953 ORTHO05D003249 5.7e-08 62.4 265 29.8
Dinv38775 Davidia involucrata HOM05D000630 ORTHO05D000365 7.4e-08 62.0 171 37.4
TAR374G0889 Trochodendron aralioides HOM05D000954 ORTHO05D000822 7.4e-08 62.0 269 27.5
BraA03t13810Z Brassica rapa HOM05D000627 ORTHO05D000365 1.3e-07 61.2 257 28.0
Nitab4.5_0000014g0320 Nicotiana tabacum HOM05D002953 ORTHO05D003249 1.3e-07 61.2 293 25.6
C07p44950 Brassica napus HOM05D000627 ORTHO05D000365 1.6e-07 60.8 257 29.2
BolC7t45018H Brassica oleracea HOM05D000627 ORTHO05D000365 1.6e-07 60.8 257 29.2
Sopen04g001490 Solanum pennellii HOM05D002953 ORTHO05D003249 1.6e-07 60.8 283 24.4
CDE10G0450 Ceratophyllum demersum HOM05D002953 ORTHO05D003249 2.2e-07 60.5 252 28.2
Lalb_Chr17g0341061 Lupinus albus HOM05D002953 ORTHO05D003249 8.2e-07 58.5 126 35.7
Carub.0008s2196 Capsella rubella HOM05D002953 ORTHO05D003249 1.1e-06 58.2 267 28.8
Lsat_1_v5_gn_4_12001 Lactuca sativa HOM05D002953 ORTHO05D003249 2.4e-06 57.0 270 27.8
Cpa.g.sc1.99 Carica papaya HOM05D002953 ORTHO05D003249 5.3e-06 55.8 275 28.0
Peaxi162Scf00314g00019 Petunia axillaris HOM05D002953 ORTHO05D003249 9.0e-06 55.1 263 24.7
SGA_v2.0_scaffold16G07764 Striga asiatica HOM05D002953 ORTHO05D003249 9.0e-06 55.1 87 40.2
HPP92_013438 Vanilla planifolia HOM05D002953 ORTHO05D003249 9.0e-06 55.1 248 26.6


User provided reference genes

Program Settings