Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr13g0302841 Lupinus albus HOM05D006637 ORTHO05D001736 3.0e-188 661.8 346 100.0
Lalb_Chr07g0178311 Lupinus albus HOM05D006637 ORTHO05D001736 1.3e-111 407.1 371 70.6
Ca_21771_v3 Cicer arietinum L. HOM05D006637 ORTHO05D001736 5.2e-60 235.7 411 44.8
Glyma.05G020700 Glycine max HOM05D006637 ORTHO05D001736 9.9e-59 231.5 358 48.9
Lj4g0016086 Lotus japonicus HOM05D006637 ORTHO05D001736 9.3e-49 198.4 359 46.5
TPR.G2044 Trifolium pratense HOM05D006637 ORTHO05D001736 2.1e-48 197.2 424 41.3
Glyma.17G078600 Glycine max HOM05D006637 ORTHO05D001736 3.5e-48 196.4 341 45.5
Psat4g068920 Pisum sativum HOM05D006637 ORTHO05D001736 1.5e-46 191.0 336 46.4
Medtr4g109570 Medicago truncatula HOM05D006637 ORTHO05D001736 5.4e-41 172.6 288 46.9
VMungo1215G2016 Vigna mungo HOM05D006637 ORTHO05D001736 1.5e-38 164.5 289 45.7
Phvul.003G184500 Phaseolus vulgaris HOM05D006637 ORTHO05D001736 9.6e-38 161.8 366 36.6
Glyma.04G162200 Glycine max HOM05D006637 ORTHO05D001736 4.8e-29 132.9 374 36.6
Glyma.06G204000 Glycine max HOM05D006637 ORTHO05D001736 2.4e-28 130.6 303 38.9
Phvul.009G201900 Phaseolus vulgaris HOM05D006637 ORTHO05D001736 4.0e-28 129.8 378 35.4
Ca_14358_v3 Cicer arietinum L. HOM05D006637 ORTHO05D001736 1.0e-26 125.2 318 39.0
Psat5g203560 Pisum sativum HOM05D006637 ORTHO05D001736 3.2e-25 120.2 293 41.0
TPR.G12192 Trifolium pratense HOM05D006637 ORTHO05D001736 3.2e-25 120.2 278 42.1
Sed0008450 Sechium edule HOM05D006637 ORTHO05D001736 1.1e-20 105.1 339 33.0
Cpa.g.sc10.158 Carica papaya HOM05D006637 ORTHO05D001736 6.9e-20 102.4 370 32.4
Medtr3g025960 Medicago truncatula HOM05D006637 ORTHO05D001736 1.3e-18 98.2 376 33.8
MD14G1212300 Malus domestica HOM05D006637 ORTHO05D001736 1.2e-16 91.7 367 33.8
Cfa019342 Carpinus fangiana HOM05D000824 ORTHO05D003555 1.6e-16 91.3 317 34.4
Atru.chr9.567 Acer truncatum HOM05D006637 ORTHO05D001736 4.6e-16 89.7 337 33.8
Aa31LG4G4510 Aethionema arabicum HOM05D006637 ORTHO05D001736 1.0e-15 88.6 275 35.3
CiPaw.11G054000 Carya illinoinensis HOM05D006637 ORTHO05D001736 1.4e-15 88.2 314 31.8
MD06G1225400 Malus domestica HOM05D006637 ORTHO05D001736 1.4e-15 88.2 359 31.5
Ciclev10023416m.g Citrus clementina HOM05D006637 ORTHO05D001736 1.8e-15 87.8 351 30.5
CARHR067480 Cardamine hirsuta HOM05D006637 ORTHO05D001736 2.3e-15 87.4 325 32.3
BcaC08g45599 Brassica carinata HOM05D006637 ORTHO05D001736 3.9e-15 86.7 258 37.6
BolC6t38463H Brassica oleracea HOM05D006637 ORTHO05D001736 1.5e-14 84.7 259 36.3
TWI81G0402 Tripterygium wilfordii HOM05D006637 ORTHO05D001736 1.5e-14 84.7 328 33.8
Sed0021860 Sechium edule HOM05D006637 ORTHO05D001736 2.5e-14 84.0 301 33.9
MELO3C017227.2 Cucumis melo HOM05D006637 ORTHO05D001736 7.4e-14 82.4 352 30.1
A02p19190 Brassica napus HOM05D006637 ORTHO05D001736 1.3e-13 81.6 284 33.5
BcaB05g24843 Brassica carinata HOM05D006637 ORTHO05D001736 3.7e-13 80.1 294 32.3
CsaV3_1G002960 Cucumis sativus L. HOM05D006637 ORTHO05D001736 4.8e-13 79.7 296 32.4
Haze_07733 Corylus avellana HOM05D006637 ORTHO05D001736 6.3e-13 79.3 225 34.7
Sp5g29400 Schrenkiella parvula HOM05D006637 ORTHO05D001736 6.3e-13 79.3 331 32.6
BraA07t30588Z Brassica rapa HOM05D006637 ORTHO05D001736 8.2e-13 79.0 256 36.7
Manes.14G086000 Manihot esculenta HOM05D006637 ORTHO05D001736 8.2e-13 79.0 315 30.5
BcaC03g15494 Brassica carinata HOM05D006637 ORTHO05D001736 1.1e-12 78.6 281 32.4
Potri.015G057200 Populus trichocarpa HOM05D006637 ORTHO05D001736 1.1e-12 78.6 381 31.0
Potri.012G061700 Populus trichocarpa HOM05D006637 ORTHO05D001736 1.4e-12 78.2 327 31.2
BraA02t06967Z Brassica rapa HOM05D006637 ORTHO05D001736 1.8e-12 77.8 256 34.0
BolC2t09205H Brassica oleracea HOM05D006637 ORTHO05D001736 3.1e-12 77.0 253 33.2
Manes.06G084300 Manihot esculenta HOM05D006637 ORTHO05D001736 5.3e-12 76.3 260 31.9
C02p31780 Brassica napus HOM05D006637 ORTHO05D001736 1.2e-11 75.1 244 33.2
ClCG06G015610 Citrullus lanatus HOM05D006637 ORTHO05D001736 1.2e-11 75.1 304 29.9
AL2G34100 Arabidopsis lyrata HOM05D006637 ORTHO05D001736 2.0e-11 74.3 342 31.3
FAN08G0389 Fragaria x ananassa HOM05D006637 ORTHO05D001736 2.0e-11 74.3 424 29.5
FvH4_5g13780 Fragaria vesca HOM05D006637 ORTHO05D001736 2.6e-11 73.9 417 29.3
Prupe.5G205600 Prunus persica HOM05D006637 ORTHO05D001736 2.6e-11 73.9 384 30.7
FAN18G2922 Fragaria x ananassa HOM05D006637 ORTHO05D001736 3.4e-11 73.6 413 28.3
TWI15G0882 Tripterygium wilfordii HOM05D006637 ORTHO05D001736 3.4e-11 73.6 379 29.6
AT1G74220 Arabidopsis thaliana HOM05D006637 ORTHO05D001736 4.5e-11 73.2 265 33.6
BraA07t31550Z Brassica rapa HOM05D006637 ORTHO05D001736 4.5e-11 73.2 261 34.5
A07p40060 Brassica napus HOM05D006637 ORTHO05D001736 1.0e-10 72.0 265 34.0
C06p33490 Brassica napus HOM05D000311 ORTHO05D000183 1.7e-10 71.2 214 37.9
Carub.0002s2101 Capsella rubella HOM05D006637 ORTHO05D001736 1.7e-10 71.2 331 32.0
Cc00_g04710 Coffea canephora HOM05D006637 ORTHO05D001736 1.7e-10 71.2 219 34.7
FAN13G0480 Fragaria x ananassa HOM05D006637 ORTHO05D001736 3.8e-10 70.1 424 28.1
RcHm_v2.0_Chr7g0183151 Rosa chinensis HOM05D006637 ORTHO05D001736 6.5e-10 69.3 290 33.4
THA.LOC104808038 Tarenaya hassleriana HOM05D006637 ORTHO05D001736 6.5e-10 69.3 257 30.4
A07p29500 Brassica napus HOM05D000311 ORTHO05D000183 8.5e-10 68.9 211 37.9
GSVIVG01012223001 Vitis vinifera HOM05D003787 ORTHO05D001736 8.5e-10 68.9 174 36.8
C06p48410 Brassica napus HOM05D006637 ORTHO05D001736 3.2e-09 67.0 262 32.1
Duzib205G1030 Durio zibethinus HOM05D006637 ORTHO05D001736 4.2e-09 66.6 263 31.2
TAR371G0370 Trochodendron aralioides HOM05D006637 ORTHO05D001736 9.4e-09 65.5 363 30.0
Duzib068G0311 Durio zibethinus HOM05D006637 ORTHO05D001736 2.7e-08 63.9 306 28.4
Thecc.03G102400 Theobroma cacao HOM05D006637 ORTHO05D001736 1.0e-07 62.0 347 27.1
Actinidia04823 Actinidia chinensis HOM05D006637 ORTHO05D001736 1.4e-07 61.6 261 31.4
Aqoxy3G03685 Aquilegia oxysepala HOM05D006637 ORTHO05D001736 3.0e-07 60.5 265 30.2
COL.COLO4_06852 Corchorus olitorius HOM05D006637 ORTHO05D001736 3.0e-07 60.5 270 30.4
Psat2g130920 Pisum sativum HOM05D014318 ORTHO05D001736 3.9e-07 60.1 79 45.6
Gohir.A12G182900 Gossypium hirsutum HOM05D006637 ORTHO05D001736 5.1e-07 59.7 235 33.2
BcaC08g46854 Brassica carinata HOM05D006637 ORTHO05D001736 8.8e-07 58.9 248 31.5
Nn4g23435 Nelumbo nucifera HOM05D006637 ORTHO05D001736 8.8e-07 58.9 242 30.6
Rhsim12G0148600 Rhododendron simsii HOM05D006637 ORTHO05D001736 1.1e-06 58.5 286 32.5
Sc12g0007280 Simmondsia chinensis HOM05D006637 ORTHO05D001736 1.1e-06 58.5 348 29.0
BcaC03g15490 Brassica carinata HOM05D006637 ORTHO05D001736 1.5e-06 58.2 234 32.9
CSS0023913 Camellia sinensis var. sinensis HOM05D003787 ORTHO05D001736 1.5e-06 58.2 327 30.6
Manes.02G055200 Manihot esculenta HOM05D003787 ORTHO05D001736 2.0e-06 57.8 333 29.4
Lj5C102T22 Lonicera japonica HOM05D006637 ORTHO05D001736 2.6e-06 57.4 233 32.6
Sabra12G0044700 Salix brachista HOM05D006637 ORTHO05D001736 5.7e-06 56.2 344 30.2
Sc10g0009690 Simmondsia chinensis HOM05D006637 ORTHO05D001736 5.7e-06 56.2 320 27.2
Sed0025283 Sechium edule HOM05D003787 ORTHO05D001736 9.7e-06 55.5 134 35.8
Sc04g0004350 Simmondsia chinensis HOM05D006637 ORTHO05D001736 9.7e-06 55.5 286 29.7


User provided reference genes

Program Settings