Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr13g0302731 Lupinus albus HOM05D000042 ORTHO05D000028 2.8e-41 171.4 81 100.0
Lalb_Chr07g0178401 Lupinus albus HOM05D000042 ORTHO05D000028 2.3e-27 125.2 79 83.5
VMungo1215G2419 Vigna mungo HOM05D000042 ORTHO05D000028 4.9e-25 117.5 78 73.1
Phvul.003G182800 Phaseolus vulgaris HOM05D000042 ORTHO05D000028 1.4e-24 115.9 78 74.4
Glyma.05G018900 Glycine max HOM05D000042 ORTHO05D000028 3.5e-23 111.3 78 71.8
Lj4g0011877 Lotus japonicus HOM05D000042 ORTHO05D000028 4.6e-23 110.9 78 70.5
Glyma.17G080900 Glycine max HOM05D000042 ORTHO05D000028 3.9e-22 107.8 78 70.5
Psat4g046520 Pisum sativum HOM05D000042 ORTHO05D000028 6.4e-17 90.5 88 53.4
QL10p020321 Quercus lobata HOM05D000042 ORTHO05D000028 2.0e-15 85.5 78 52.6
arahy.Tifrunner.gnm1.ann1.AK1FA2 Arachis hypogaea HOM05D000042 ORTHO05D000028 7.8e-15 83.6 82 61.0
arahy.Tifrunner.gnm1.ann1.TZ3ZMM Arachis hypogaea HOM05D000042 ORTHO05D000028 7.8e-15 83.6 82 61.0
Medtr4g109810 Medicago truncatula HOM05D000042 ORTHO05D000028 2.5e-13 78.6 79 54.4
SHI17451 Sapria himalayana HOM05D000042 ORTHO05D000028 3.1e-11 71.6 80 50.0
Atru.chr9.472 Acer truncatum HOM05D000042 ORTHO05D000028 6.8e-11 70.5 80 45.0
Dinv31035 Davidia involucrata HOM05D000042 ORTHO05D000028 8.9e-11 70.1 75 49.3
Dinv31068 Davidia involucrata HOM05D000042 ORTHO05D000028 8.9e-11 70.1 75 49.3
Cfa019365 Carpinus fangiana HOM05D000042 ORTHO05D000028 2.0e-10 68.9 80 46.2
Prupe.5G208400 Prunus persica HOM05D000042 ORTHO05D000028 2.6e-10 68.6 86 47.7
Cfa019364 Carpinus fangiana HOM05D000042 ORTHO05D000028 3.4e-10 68.2 80 46.2
MD14G1215600 Malus domestica HOM05D000042 ORTHO05D000028 4.4e-10 67.8 82 47.6
Nn4g23508 Nelumbo nucifera HOM05D000042 ORTHO05D000028 4.4e-10 67.8 88 46.6
Haze_07756 Corylus avellana HOM05D000042 ORTHO05D000028 5.8e-10 67.4 80 46.2
COL.COLO4_05848 Corchorus olitorius HOM05D000042 ORTHO05D000028 7.5e-10 67.0 81 49.4
Actinidia26670 Actinidia chinensis HOM05D000042 ORTHO05D000028 1.3e-09 66.2 79 43.0
Duzib084G1305 Durio zibethinus HOM05D000042 ORTHO05D000028 8.3e-09 63.5 79 46.8
Eucgr.K02546 Eucalyptus grandis HOM05D000042 ORTHO05D000028 8.3e-09 63.5 81 42.0
Nitab4.5_0002041g0030 Nicotiana tabacum HOM05D000042 ORTHO05D000028 8.3e-09 63.5 80 42.5
Nn3g17516 Nelumbo nucifera HOM05D000042 ORTHO05D000028 1.4e-08 62.8 87 44.8
Manes.14G088400 Manihot esculenta HOM05D000042 ORTHO05D000028 2.4e-08 62.0 80 46.2
Peaxi162Scf00365g00212 Petunia axillaris HOM05D000042 ORTHO05D000028 3.2e-08 61.6 81 39.5
TAR374G0549 Trochodendron aralioides HOM05D000042 ORTHO05D019243 4.1e-08 61.2 75 44.0
ATR0827G094 Amborella trichopoda HOM05D000042 ORTHO05D000028 5.4e-08 60.8 61 47.5
Eucgr.B00633 Eucalyptus grandis HOM05D000042 ORTHO05D000028 5.4e-08 60.8 55 52.7
Rhsim12G0150100 Rhododendron simsii HOM05D000042 ORTHO05D000028 5.4e-08 60.8 77 42.9
Gohir.D09G244400 Gossypium hirsutum HOM05D000042 ORTHO05D000028 7.1e-08 60.5 81 44.4
Ciclev10021357m.g Citrus clementina HOM05D000042 ORTHO05D000028 9.2e-08 60.1 83 44.6
TAR622G0912 Trochodendron aralioides HOM05D000042 ORTHO05D019243 9.2e-08 60.1 61 47.5
Thecc.03G106300 Theobroma cacao HOM05D000042 ORTHO05D000028 1.2e-07 59.7 61 49.2
FvH4_5g13510 Fragaria vesca HOM05D000042 ORTHO05D000028 1.6e-07 59.3 88 40.9
FAN18G2077 Fragaria x ananassa HOM05D000042 ORTHO05D000028 1.6e-07 59.3 88 40.9
Dinv34042 Davidia involucrata HOM05D000042 ORTHO05D000028 4.6e-07 57.8 81 44.4
Dinv34183 Davidia involucrata HOM05D000042 ORTHO05D000028 4.6e-07 57.8 81 44.4
FAN08G2314 Fragaria x ananassa HOM05D000042 ORTHO05D000028 4.6e-07 57.8 88 40.9
arahy.Tifrunner.gnm1.ann1.K5QGI1 Arachis hypogaea HOM05D000042 ORTHO05D000028 6.0e-07 57.4 82 47.6
Thecc.03G106400 Theobroma cacao HOM05D000042 ORTHO05D000028 6.0e-07 57.4 89 41.6
MD06G1204300 Malus domestica HOM05D000042 ORTHO05D000028 7.8e-07 57.0 84 42.9
GSVIVG01008139001 Vitis vinifera HOM05D000042 ORTHO05D000028 7.8e-07 57.0 79 41.8
Gorai.006G268400 Gossypium raimondii HOM05D000042 ORTHO05D000028 1.0e-06 56.6 81 43.2
PGR083G2567 Punica granatum HOM05D000042 ORTHO05D000028 1.0e-06 56.6 83 44.6
Gohir.A09G243700 Gossypium hirsutum HOM05D000042 ORTHO05D000028 1.3e-06 56.2 83 42.2
Lj9A438T59 Lonicera japonica HOM05D000042 ORTHO05D000028 1.3e-06 56.2 91 39.6
TPR.G1982 Trifolium pratense HOM05D000042 ORTHO05D000028 1.7e-06 55.8 78 47.4
CAN.G1592.4 Capsicum annuum HOM05D000042 ORTHO05D000028 6.6e-06 53.9 82 36.6
Cpa.g.sc660.1 Carica papaya HOM05D000042 ORTHO05D000028 6.6e-06 53.9 61 41.0


User provided reference genes

Program Settings