Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 1.1e-130 469.9 237 100.0
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 5.4e-117 424.5 237 92.0
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 5.1e-115 417.9 237 89.5
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 3.3e-114 415.2 237 89.9
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 1.3e-113 413.3 233 89.7
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 2.8e-113 412.1 237 89.5
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 9.0e-112 407.1 233 89.3
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 2.6e-111 405.6 237 88.2
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 4.5e-111 404.8 237 87.8
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 5.8e-111 404.4 239 87.0
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 9.9e-111 403.7 237 86.9
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 2.2e-110 402.5 237 86.5
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 2.9e-110 402.1 237 87.3
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 1.1e-109 400.2 237 87.3
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 1.9e-109 399.4 245 85.3
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 2.5e-109 399.1 237 86.1
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 3.2e-109 398.7 237 86.1
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 2.1e-108 396.0 237 84.4
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 6.0e-108 394.4 237 83.5
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 6.0e-108 394.4 235 86.0
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 3.0e-107 392.1 233 83.7
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 3.0e-107 392.1 240 82.9
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 5.1e-107 391.3 237 83.1
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 5.1e-107 391.3 237 84.4
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 1.1e-106 390.2 237 85.7
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 1.1e-106 390.2 239 84.9
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 1.5e-106 389.8 237 83.5
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 1.9e-106 389.4 237 85.2
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 1.9e-106 389.4 235 85.1
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 1.9e-106 389.4 230 87.0
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 2.5e-106 389.0 237 84.4
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 5.6e-106 387.9 237 84.4
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.3e-105 386.7 225 84.9
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.3e-105 386.7 225 84.9
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 1.6e-105 386.3 237 83.5
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 2.1e-105 386.0 241 83.0
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 2.8e-105 385.6 242 79.8
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 6.2e-105 384.4 237 82.7
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 8.2e-105 384.0 237 84.8
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 1.4e-104 383.3 226 85.4
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.4e-104 383.3 225 84.0
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 1.8e-104 382.9 237 82.3
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 2.4e-104 382.5 233 84.1
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 2.4e-104 382.5 225 84.0
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.4e-104 382.5 225 84.0
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 4.0e-104 381.7 237 81.9
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.9e-104 380.9 225 83.1
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.2e-103 380.2 225 83.1
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.2e-103 380.2 225 83.1
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 1.5e-103 379.8 237 80.2
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 4.5e-103 378.3 237 80.2
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 7.6e-103 377.5 237 81.0
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 7.6e-103 377.5 241 81.7
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.0e-102 377.1 235 82.1
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 1.3e-102 376.7 237 79.7
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 1.7e-102 376.3 240 79.6
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 2.9e-102 375.6 237 80.2
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 2.9e-102 375.6 237 79.3
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 2.9e-102 375.6 237 79.7
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 3.8e-102 375.2 240 79.6
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 1.9e-101 372.9 237 77.6
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 5.5e-101 371.3 228 80.3
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 7.1e-101 370.9 229 80.8
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 1.8e-99 366.3 237 80.2
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 2.3e-99 365.9 226 80.1
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 3.9e-99 365.2 239 77.0
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 5.1e-99 364.8 233 79.0
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 6.7e-99 364.4 226 79.6
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 1.9e-98 362.8 241 75.9
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 1.9e-98 362.8 241 77.2
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 3.3e-98 362.1 226 78.8
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 4.3e-98 361.7 237 76.8
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 4.3e-98 361.7 237 78.5
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 7.4e-98 360.9 238 77.3
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 9.7e-98 360.5 237 78.1
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 1.6e-97 359.8 240 76.2
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 1.6e-97 359.8 229 79.9
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 1.6e-97 359.8 224 78.6
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 2.2e-97 359.4 237 75.1
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 4.8e-97 358.2 237 76.4
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 1.1e-96 357.1 226 78.8
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 1.1e-96 357.1 237 75.5
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 3.1e-96 355.5 228 77.2
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 3.1e-96 355.5 237 75.9
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 4.1e-96 355.1 237 74.3
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 4.1e-96 355.1 237 74.3
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 4.1e-96 355.1 220 79.1
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 5.3e-96 354.8 238 74.8
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 1.2e-95 353.6 237 74.7
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 1.2e-95 353.6 237 74.3
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 1.5e-95 353.2 235 76.6
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 1.5e-95 353.2 238 74.8
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 2.0e-95 352.8 241 74.7
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 3.4e-95 352.1 239 75.7
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 1.0e-94 350.5 226 78.3
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 2.9e-94 349.0 235 75.7
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 1.1e-93 347.1 237 73.4
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 1.1e-93 347.1 237 74.3
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 1.4e-93 346.7 229 74.7
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 3.2e-93 345.5 228 76.8
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 3.2e-93 345.5 237 72.6
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 7.9e-92 340.9 228 74.6
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.0e-91 340.5 237 77.6
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 6.7e-91 337.8 228 73.7
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 6.7e-91 337.8 237 73.8
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 7.4e-90 334.3 228 72.4
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 9.7e-90 334.0 241 72.2
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 9.7e-90 334.0 331 58.6
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 2.2e-89 332.8 261 66.3
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 5.3e-88 328.2 305 58.7
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 7.7e-87 324.3 224 69.2
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 1.3e-86 323.6 188 86.2
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 7.2e-85 317.8 237 70.0
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 9.4e-85 317.4 228 66.7
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 1.2e-84 317.0 228 65.8
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 2.7e-84 315.8 237 67.5
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 4.7e-84 315.1 226 69.5
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 7.9e-84 314.3 237 67.9
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 4.4e-82 308.5 193 78.2
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 3.7e-81 305.4 192 77.6
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 3.7e-81 305.4 195 78.5
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 3.1e-80 302.4 202 76.2
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 2.6e-79 299.3 228 62.7
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 3.2e-77 292.4 233 67.4
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 2.6e-71 272.7 168 81.0
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 5.5e-69 265.0 194 69.1
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 2.4e-64 249.6 150 82.0
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 1.0e-62 244.2 228 57.9
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 4.5e-55 218.8 219 51.6
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 1.0e-54 217.6 150 68.0
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 6.4e-41 171.8 119 69.7
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 1.2e-36 157.5 192 38.0
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 8.0e-36 154.8 105 74.3
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 2.9e-33 146.4 97 79.4
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 2.4e-24 116.7 206 33.5
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 3.8e-09 66.2 40 75.0


User provided reference genes

Program Settings