Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr13g0297281 Lupinus albus HOM05D004927 ORTHO05D005798 6.7e-70 267.3 142 100.0
Lalb_Chr12g0202181 Lupinus albus HOM05D004927 ORTHO05D005798 1.5e-58 229.6 141 85.8
Glyma.05G047500 Glycine max HOM05D004927 ORTHO05D005798 6.7e-46 187.6 147 72.1
Phvul.003G210400 Phaseolus vulgaris HOM05D004927 ORTHO05D005798 3.7e-44 181.8 147 71.4
Glyma.17G129300 Glycine max HOM05D004927 ORTHO05D005798 2.6e-42 175.6 134 73.1
CiPaw.12G042500 Carya illinoinensis HOM05D004927 ORTHO05D005798 1.9e-40 169.5 152 63.8
Lj4g0014142 Lotus japonicus HOM05D004927 ORTHO05D005798 7.2e-40 167.5 140 67.1
Prupe.5G152100 Prunus persica HOM05D004927 ORTHO05D005798 2.1e-39 166.0 151 64.2
Psat0s2546g0040 Pisum sativum HOM05D004927 ORTHO05D005798 2.7e-39 165.6 139 65.5
Sp2g26540 Schrenkiella parvula HOM05D004927 ORTHO05D005798 3.6e-39 165.2 146 65.1
AL8G40520 Arabidopsis lyrata HOM05D004927 ORTHO05D005798 6.1e-39 164.5 149 63.8
TWI23G0043 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 1.0e-38 163.7 149 61.1
Ciclev10022591m.g Citrus clementina HOM05D004927 ORTHO05D005798 1.4e-38 163.3 150 62.7
Medtr4g103580 Medicago truncatula HOM05D004927 ORTHO05D005798 1.8e-38 162.9 139 65.5
CANSAT80G0771 Cannabis sativa HOM05D004927 ORTHO05D005798 3.0e-38 162.2 150 61.3
AT5G63460 Arabidopsis thaliana HOM05D004927 ORTHO05D005798 2.0e-37 159.5 149 62.4
TPR.G19215 Trifolium pratense HOM05D004927 ORTHO05D005798 2.0e-37 159.5 138 61.6
Carub.0008s2416 Capsella rubella HOM05D004927 ORTHO05D005798 4.4e-37 158.3 149 61.7
Aa31LG1G18580 Aethionema arabicum HOM05D004927 ORTHO05D005798 1.3e-36 156.8 150 60.7
Duzib068G0304 Durio zibethinus HOM05D004927 ORTHO05D005798 1.3e-36 156.8 148 59.5
Thhalv10005047m.g Eutrema salsugineum HOM05D004927 ORTHO05D005798 1.7e-36 156.4 149 61.7
CiPaw.11G008400 Carya illinoinensis HOM05D004927 ORTHO05D005798 2.2e-36 156.0 147 59.9
Potri.015G094600 Populus trichocarpa HOM05D004927 ORTHO05D005798 2.2e-36 156.0 152 59.9
VMungo1215G0874 Vigna mungo HOM05D004927 ORTHO05D005798 2.2e-36 156.0 126 72.2
Actinidia25582 Actinidia chinensis HOM05D004927 ORTHO05D005798 2.8e-36 155.6 151 60.9
Potri.012G096900 Populus trichocarpa HOM05D004927 ORTHO05D005798 4.8e-36 154.8 149 61.7
Dinv11165 Davidia involucrata HOM05D004927 ORTHO05D005798 8.2e-36 154.1 154 59.7
CARHR277310 Cardamine hirsuta HOM05D004927 ORTHO05D005798 2.4e-35 152.5 149 59.7
Atru.chr9.1061 Acer truncatum HOM05D004927 ORTHO05D005798 3.1e-35 152.1 145 58.6
BcaC04g23330 Brassica carinata HOM05D004927 ORTHO05D005798 3.1e-35 152.1 146 61.6
GSVIVG01008533001 Vitis vinifera HOM05D004927 ORTHO05D005798 4.1e-35 151.8 156 59.6
Dinv23136 Davidia involucrata HOM05D004927 ORTHO05D005798 7.0e-35 151.0 154 59.7
MD06G1142800 Malus domestica HOM05D004927 ORTHO05D005798 7.0e-35 151.0 152 57.9
PGR083G0131 Punica granatum HOM05D004927 ORTHO05D005798 7.0e-35 151.0 152 56.6
Manes.14G051700 Manihot esculenta HOM05D004927 ORTHO05D005798 7.7e-34 147.5 151 56.3
Gohir.D11G039650 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.3e-33 146.7 148 58.8
CSS0046411 Camellia sinensis var. sinensis HOM05D004927 ORTHO05D005798 1.7e-33 146.4 152 56.6
TWI39G0602 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 1.7e-33 146.4 149 58.4
Duzib205G1407 Durio zibethinus HOM05D004927 ORTHO05D005798 3.8e-33 145.2 150 55.3
THA.LOC104798947 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 5.0e-33 144.8 151 55.6
Thecc.03G128000 Theobroma cacao HOM05D004927 ORTHO05D005798 5.0e-33 144.8 148 57.4
vmacro19200 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 5.0e-33 144.8 141 59.6
arahy.Tifrunner.gnm1.ann1.9DG48R Arachis hypogaea HOM05D004927 ORTHO05D005798 8.5e-33 144.1 128 63.3
arahy.Tifrunner.gnm1.ann1.PKYK26 Arachis hypogaea HOM05D004927 ORTHO05D005798 8.5e-33 144.1 128 63.3
Actinidia33102 Actinidia chinensis HOM05D004927 ORTHO05D005798 1.5e-32 143.3 151 57.6
THA.LOC104818187 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 1.9e-32 142.9 151 57.0
Manes.06G118800 Manihot esculenta HOM05D004927 ORTHO05D005798 3.2e-32 142.1 139 59.0
Actinidia08867 Actinidia chinensis HOM05D004927 ORTHO05D005798 5.5e-32 141.4 150 57.3
Gohir.A11G036100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 7.2e-32 141.0 148 58.1
Gorai.007G042600 Gossypium raimondii HOM05D004927 ORTHO05D005798 1.2e-31 140.2 152 56.6
MD14G1158000 Malus domestica HOM05D004927 ORTHO05D005798 2.1e-31 139.4 152 55.3
Oeu056013.1 Olea europaea HOM05D004927 ORTHO05D005798 3.6e-31 138.7 154 55.8
Sc04g0000700 Simmondsia chinensis HOM05D004927 ORTHO05D005798 8.0e-31 137.5 137 59.1
MELO3C026211.2 Cucumis melo HOM05D004927 ORTHO05D005798 1.8e-30 136.3 148 56.8
Cc04_g10030 Coffea canephora HOM05D004927 ORTHO05D005798 3.0e-30 135.6 151 54.3
CsaV3_1G000620 Cucumis sativus L. HOM05D004927 ORTHO05D005798 3.0e-30 135.6 148 56.8
Sabra12G0070900 Salix brachista HOM05D004927 ORTHO05D005798 3.0e-30 135.6 152 55.9
BcaB04g19918 Brassica carinata HOM05D004927 ORTHO05D005798 4.0e-30 135.2 135 58.5
MBI07_g34620_MAGBIO Magnolia biondii HOM05D004927 ORTHO05D005798 4.0e-30 135.2 149 56.4
MSTRG.4598 Avicennia marina HOM05D004927 ORTHO05D005798 5.2e-30 134.8 152 55.9
A09p08260 Brassica napus HOM05D004927 ORTHO05D005798 6.7e-30 134.4 135 59.3
MSTRG.11279 Avicennia marina HOM05D004927 ORTHO05D005798 1.2e-29 133.7 153 57.5
C09p09350 Brassica napus HOM05D000789 ORTHO05D005798 1.2e-29 133.7 135 59.3
BolC9t53847H Brassica oleracea HOM05D000789 ORTHO05D005798 1.2e-29 133.7 135 59.3
FvH4_5g08180 Fragaria vesca HOM05D004927 ORTHO05D005798 1.2e-29 133.7 150 54.0
CDE02G1054 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 2.0e-29 132.9 142 54.9
Nn3g16487 Nelumbo nucifera HOM05D004927 ORTHO05D005798 4.4e-29 131.7 152 53.9
Sed0011812 Sechium edule HOM05D004927 ORTHO05D005798 4.4e-29 131.7 148 56.1
Gorai.006G271700 Gossypium raimondii HOM05D004927 ORTHO05D005798 7.5e-29 131.0 148 52.0
Nitab4.5_0003005g0020 Nicotiana tabacum HOM05D004927 ORTHO05D005798 9.7e-29 130.6 151 55.0
Sabra15G0116000 Salix brachista HOM05D004927 ORTHO05D005798 3.7e-28 128.6 168 50.0
Solyc03g111270.2 Solanum lycopersicum HOM05D004927 ORTHO05D005798 6.3e-28 127.9 147 50.3
Sopen03g030400 Solanum pennellii HOM05D004927 ORTHO05D005798 6.3e-28 127.9 147 50.3
Rhsim08G0189300 Rhododendron simsii HOM05D004927 ORTHO05D005798 1.1e-27 127.1 165 49.7
PSO063G5502 Papaver somniferum HOM05D004927 ORTHO05D005798 1.4e-27 126.7 158 51.3
Dinv04882 Davidia involucrata HOM05D004927 ORTHO05D005798 4.1e-27 125.2 129 61.2
ECA247G2750 Erigeron canadensis HOM05D004927 ORTHO05D005798 5.3e-27 124.8 150 53.3
RcHm_v2.0_Chr7g0190331 Rosa chinensis HOM05D004927 ORTHO05D005798 9.1e-27 124.0 156 52.6
BraA09t36477Z Brassica rapa HOM05D004927 ORTHO05D005798 1.2e-26 123.6 148 53.4
FAN04G0012 Fragaria x ananassa HOM05D004927 ORTHO05D005798 2.0e-26 122.9 137 55.5
TAR622G0157 Trochodendron aralioides HOM05D004927 ORTHO05D005798 4.5e-26 121.7 148 51.4
FAN13G0393 Fragaria x ananassa HOM05D004927 ORTHO05D005798 5.9e-26 121.3 137 54.7
Gorai.004G275800 Gossypium raimondii HOM05D004927 ORTHO05D005798 5.9e-26 121.3 148 50.0
FAN18G3853 Fragaria x ananassa HOM05D004927 ORTHO05D005798 1.0e-25 120.6 137 54.0
Migut.D01264 Erythranthe guttata HOM05D004927 ORTHO05D005798 1.3e-25 120.2 147 51.7
HanXRQChr07g0193231 Helianthus annuus HOM05D004927 ORTHO05D005798 1.3e-25 120.2 148 50.7
HanXRQChr09g0273101 Helianthus annuus HOM05D004927 ORTHO05D005798 6.5e-25 117.9 147 51.0
Aqoxy3G01521 Aquilegia oxysepala HOM05D004927 ORTHO05D005798 8.5e-25 117.5 155 48.4
DCAR_026226 Daucus carota HOM05D004927 ORTHO05D005798 8.5e-25 117.5 140 52.9
QL10p003733 Quercus lobata HOM05D004927 ORTHO05D005798 8.5e-25 117.5 126 57.9
FAN08G3438 Fragaria x ananassa HOM05D004927 ORTHO05D005798 1.5e-24 116.7 137 54.0
Lsat_1_v5_gn_1_29040 Lactuca sativa HOM05D004927 ORTHO05D005798 1.5e-24 116.7 150 50.7
HPP92_001413 Vanilla planifolia HOM05D004927 ORTHO05D005798 2.5e-24 115.9 144 48.6
Gohir.A09G247250 Gossypium hirsutum HOM05D004927 ORTHO05D005798 3.2e-24 115.5 137 52.6
SGA_v2.0_scaffold215G42324 Striga asiatica HOM05D004927 ORTHO05D005798 7.2e-24 114.4 139 48.9
unitig_61.g26197 Utricularia gibba HOM05D004927 ORTHO05D005798 7.2e-24 114.4 160 48.1
EL10As4g23391 Beta vulgaris HOM05D004927 ORTHO05D005798 1.6e-23 113.2 121 54.5
Oeu018539.1 Olea europaea HOM05D004927 ORTHO05D005798 1.6e-23 113.2 152 49.3
SalBow1G5982 Salvia bowleyana HOM05D004927 ORTHO05D005798 2.1e-23 112.8 135 52.6
Lsat_1_v5_gn_4_80380 Lactuca sativa HOM05D004927 ORTHO05D005798 3.6e-23 112.1 145 51.7
BolC2t12346H Brassica oleracea HOM05D001512 ORTHO05D001574 1.4e-22 110.2 106 61.3
PSO782G2667 Papaver somniferum HOM05D004927 ORTHO05D005798 2.3e-22 109.4 150 48.0
C02p62750 Brassica napus HOM05D001512 ORTHO05D001574 6.8e-22 107.8 106 60.4
vmacro16676 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 3.4e-21 105.5 112 58.9
Haze_07225 Corylus avellana HOM05D004927 ORTHO05D005798 5.7e-21 104.8 104 60.6
Gohir.D08G258600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 9.8e-21 104.0 137 49.6
PSO017G7268 Papaver somniferum HOM05D004927 ORTHO05D005798 2.2e-20 102.8 154 46.8
PSO478G0696 Papaver somniferum HOM05D004927 ORTHO05D005798 2.2e-20 102.8 154 46.8
Os12g0442900 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 3.7e-20 102.1 154 44.2
Zm00001eb169640 Zea mays HOM05D004927 ORTHO05D005798 6.3e-20 101.3 153 45.8
SGA_v2.0_scaffold161G37795 Striga asiatica HOM05D004927 ORTHO05D005798 1.1e-19 100.5 192 39.6
Os11g0483600 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 1.4e-19 100.1 161 42.2
BcaC03g18207 Brassica carinata HOM05D004927 ORTHO05D005798 1.8e-19 99.8 137 50.4
SalBow1G7483 Salvia bowleyana HOM05D004927 ORTHO05D005798 1.8e-19 99.8 168 42.9
Eucgr.B00112 Eucalyptus grandis HOM05D004927 ORTHO05D005798 5.4e-19 98.2 111 53.2
AagrBONN_evm.TU.Sc2ySwM_344.432 Anthoceros agrestis HOM05D004927 ORTHO05D005798 1.0e-17 94.0 143 39.9
Pp3c8_10310 Physcomitrium patens HOM05D004927 ORTHO05D005798 1.7e-17 93.2 154 43.5
Nitab4.5_0016919g0010 Nicotiana tabacum HOM05D004927 ORTHO05D005798 6.5e-17 91.3 111 52.3
Lj9A478G96 Lonicera japonica HOM05D004927 ORTHO05D005798 1.5e-16 90.1 148 45.9
CBR_g36334 Chara braunii HOM05D004927 ORTHO05D005798 3.3e-16 89.0 172 39.5
CDE05G1557 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 1.6e-15 86.7 114 47.4
ClCG06G017840 Citrullus lanatus HOM05D004927 ORTHO05D005798 2.1e-15 86.3 87 58.6
CBR_g27958 Chara braunii HOM05D004927 ORTHO05D005798 2.8e-15 85.9 164 39.6
PGSC0003DMG400015243 Solanum tuberosum HOM05D004927 ORTHO05D005798 1.4e-14 83.6 154 44.2
COL.COLO4_28098 Corchorus olitorius HOM05D004927 ORTHO05D005798 2.6e-13 79.3 82 54.9
ATR0561G036 Amborella trichopoda HOM05D004927 ORTHO05D005798 1.7e-12 76.6 120 46.7
SMO334G0034 Selaginella moellendorffii HOM05D004927 ORTHO05D005798 2.2e-12 76.3 140 37.1
Migut.I00501 Erythranthe guttata HOM05D004927 ORTHO05D005798 2.8e-12 75.9 116 45.7
Gohir.A09G246700 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.8e-11 73.2 79 51.9
Cfa018832 Carpinus fangiana HOM05D004927 ORTHO05D005798 3.1e-11 72.4 65 64.6
BraA02t09201Z Brassica rapa HOM05D004927 ORTHO05D005798 4.1e-11 72.0 84 58.3
CAN.G352.25 Capsicum annuum HOM05D004927 ORTHO05D005798 3.5e-10 68.9 86 50.0
HPP92_001420 Vanilla planifolia HOM05D004927 ORTHO05D005798 5.9e-10 68.2 68 51.5
Cpa.g.sc13.128 Carica papaya HOM05D004927 ORTHO05D005798 2.9e-09 65.9 59 61.0
Mapoly0121s0035 Marchantia polymorpha HOM05D004927 ORTHO05D005798 8.6e-09 64.3 98 41.8
Gohir.D09G247201 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.1e-08 63.9 64 53.1
Hma1.2p1_2767F.1_g328170 Hydrangea macrophylla HOM05D004927 ORTHO05D005798 6.1e-07 58.2 71 56.3
SEGI_01314 Sequoiadendron giganteum HOM05D004927 ORTHO05D005798 1.0e-06 57.4 52 53.8
A02p42760 Brassica napus HOM05D001512 ORTHO05D001574 1.4e-06 57.0 57 59.6
Gohir.D09G248000 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.8e-06 56.6 129 34.9
Gohir.D01G081600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 2.3e-06 56.2 55 54.5
Gohir.D07G062100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 2.3e-06 56.2 55 54.5
Gorai.007G057300 Gossypium raimondii HOM05D004927 ORTHO05D005798 2.3e-06 56.2 55 54.5
Lsat_1_v5_gn_5_95420 Lactuca sativa HOM05D004927 ORTHO05D005798 2.3e-06 56.2 86 45.3


User provided reference genes

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