Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 8.1e-106 387.1 200 100.0
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 1.2e-69 266.9 205 70.2
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 3.4e-51 205.7 212 58.5
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 3.5e-48 195.7 208 57.2
Medtr8g096640 Medicago truncatula HOM05D007269 ORTHO05D008531 1.0e-39 167.5 216 51.4
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 2.9e-39 166.0 219 50.7
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 2.5e-38 162.9 219 49.3
VMungo0251G2992 Vigna mungo HOM05D031312 ORTHO05D008531 3.9e-31 139.0 165 55.2
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 9.5e-22 107.8 197 40.6
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 4.7e-21 105.5 204 38.7
arahy.Tifrunner.gnm1.ann1.0J46GK Arachis hypogaea HOM05D031312 ORTHO05D008531 8.1e-21 104.8 160 49.4
arahy.Tifrunner.gnm1.ann1.MRR6R9 Arachis hypogaea HOM05D031312 ORTHO05D008531 1.1e-20 104.4 153 50.3
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 1.1e-20 104.4 193 39.4
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.1e-20 104.4 202 37.6
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.4e-19 99.0 199 36.2
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 4.9e-18 95.5 203 34.5
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 1.1e-17 94.4 201 35.8
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.2e-16 90.9 209 35.4
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.6e-16 90.5 207 34.3
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 4.6e-16 89.0 197 35.0
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 6.0e-16 88.6 205 33.2
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 1.0e-15 87.8 210 33.8
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 1.3e-15 87.4 123 43.9
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 1.7e-15 87.0 196 36.7
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 3.0e-15 86.3 202 32.2
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 3.0e-15 86.3 196 33.2
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 3.9e-15 85.9 207 36.2
Glyma.05G203500 Glycine max HOM05D031312 ORTHO05D008531 5.1e-15 85.5 155 41.3
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 6.6e-15 85.1 209 33.5
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 8.6e-15 84.7 214 34.6
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 8.6e-15 84.7 220 35.0
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 7.3e-14 81.6 190 33.7
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 9.5e-14 81.3 226 31.9
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 9.5e-14 81.3 212 33.5
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 1.2e-13 80.9 212 34.0
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.2e-13 80.9 212 34.0
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 1.2e-13 80.9 213 33.3
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 2.1e-13 80.1 203 31.0
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.1e-13 80.1 232 31.0
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 6.2e-13 78.6 195 31.3
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 8.1e-13 78.2 220 32.3
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 1.4e-12 77.4 216 32.4
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 4.0e-12 75.9 212 34.0
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 5.2e-12 75.5 207 31.4
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 8.9e-12 74.7 202 31.7
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 1.2e-11 74.3 195 34.4
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 1.5e-11 73.9 218 32.1
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.0e-11 73.6 203 34.0
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 2.6e-11 73.2 226 29.2
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.6e-11 73.2 195 33.8
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 4.4e-11 72.4 203 33.0
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.4e-11 72.4 205 33.2
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 5.8e-11 72.0 232 29.7
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 9.9e-11 71.2 203 32.5
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 9.9e-11 71.2 228 30.7
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 9.9e-11 71.2 225 30.7
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 9.9e-11 71.2 217 30.4
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 4.9e-10 68.9 242 27.7
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 4.9e-10 68.9 207 31.4
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 8.4e-10 68.2 236 30.5
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 1.1e-09 67.8 218 32.1
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 3.2e-09 66.2 221 33.0
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 3.2e-09 66.2 195 32.3
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 5.4e-09 65.5 239 29.3
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 5.4e-09 65.5 225 28.9
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 9.2e-09 64.7 236 29.7
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 9.2e-09 64.7 195 30.3
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.2e-08 64.3 201 31.8
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 1.2e-08 64.3 245 29.4
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 1.6e-08 63.9 234 32.1
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 2.1e-08 63.5 241 30.3
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 3.5e-08 62.8 105 37.1
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 4.6e-08 62.4 226 28.8
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 4.6e-08 62.4 224 33.9
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 1.3e-07 60.8 161 38.5
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 3.0e-07 59.7 233 28.3
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 3.9e-07 59.3 163 36.2
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 3.9e-07 59.3 259 28.2
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 3.9e-07 59.3 210 31.0
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 2.5e-06 56.6 207 30.4
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 3.3e-06 56.2 135 31.9
Dinv23173 Davidia involucrata HOM05D007269 ORTHO05D008531 5.6e-06 55.5 159 31.4
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 7.3e-06 55.1 201 29.9
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 7.3e-06 55.1 201 29.9


User provided reference genes

Program Settings