Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr13g0294171 Lupinus albus HOM05D005632 ORTHO05D006870 3.9e-31 137.5 69 100.0
Glyma.05G145700 Glycine max HOM05D005632 ORTHO05D006870 1.4e-20 102.4 69 76.8
VMungo0251G3265 Vigna mungo HOM05D005632 ORTHO05D006870 2.4e-20 101.7 69 73.9
Lj4g0009016 Lotus japonicus HOM05D005632 ORTHO05D006870 2.0e-19 98.6 69 73.9
Glyma.08G102500 Glycine max HOM05D005632 ORTHO05D006870 2.6e-19 98.2 69 73.9
Cfa009318 Carpinus fangiana HOM05D005632 ORTHO05D006870 3.8e-18 94.4 69 71.0
Haze_12372 Corylus avellana HOM05D005632 ORTHO05D006870 4.9e-18 94.0 68 70.6
Peaxi162Scf00128g00929 Petunia axillaris HOM05D005632 ORTHO05D006870 2.4e-17 91.7 69 68.1
Gohir.A01G155800 Gossypium hirsutum HOM05D005632 ORTHO05D006870 9.3e-17 89.7 69 68.1
Peaxi162Scf00797g00115 Petunia axillaris HOM05D005632 ORTHO05D006870 1.2e-16 89.4 68 67.6
MSTRG.522 Avicennia marina HOM05D005632 ORTHO05D006870 1.6e-16 89.0 69 65.2
BcaB03g15184 Brassica carinata HOM05D005632 ORTHO05D006870 1.6e-16 89.0 71 67.6
QL03p054693 Quercus lobata HOM05D005632 ORTHO05D006870 1.6e-16 89.0 68 64.7
Potri.010G056800 Populus trichocarpa HOM05D005632 ORTHO05D006870 7.8e-16 86.7 63 71.4
MBI11_g46744_MAGBIO Magnolia biondii HOM05D005632 ORTHO05D006870 1.0e-15 86.3 67 65.7
vmacro01081 Vaccinium macrocarpon HOM05D005632 ORTHO05D006870 1.0e-15 86.3 69 65.2
Hma1.2p1_1340F.1_g276780 Hydrangea macrophylla HOM05D005632 ORTHO05D006870 1.3e-15 85.9 69 63.8
DCAR_031183 Daucus carota HOM05D005632 ORTHO05D006870 1.7e-15 85.5 69 63.8
EL10Ac6g13443 Beta vulgaris HOM05D005632 ORTHO05D006870 2.3e-15 85.1 68 63.2
AUR62005576 Chenopodium quinoa HOM05D005632 ORTHO05D006870 3.0e-15 84.7 66 65.2
MBI08_g36441_MAGBIO Magnolia biondii HOM05D005632 ORTHO05D006870 3.9e-15 84.3 69 60.9
HanXRQChr08g0207511 Helianthus annuus HOM05D005632 ORTHO05D006870 1.5e-14 82.4 68 63.2
Migut.E00242 Erythranthe guttata HOM05D005632 ORTHO05D006870 1.9e-14 82.0 68 60.3
Dinv10990 Davidia involucrata HOM05D005632 ORTHO05D006870 1.3e-13 79.3 61 68.9
Hund06068 Selenicereus undatus HOM05D005632 ORTHO05D006870 3.6e-13 77.8 58 69.0
CiPaw.05G114600 Carya illinoinensis HOM05D005632 ORTHO05D006870 1.1e-12 76.3 69 60.9
Rhsim12G0029700 Rhododendron simsii HOM05D005632 ORTHO05D006870 1.1e-12 76.3 69 60.9
MSTRG.13321 Avicennia marina HOM05D005632 ORTHO05D006870 1.4e-12 75.9 59 66.1
SalBow2G0748 Salvia bowleyana HOM05D005632 ORTHO05D006870 3.1e-12 74.7 67 64.2
TWI36G0420 Tripterygium wilfordii HOM05D005632 ORTHO05D006870 9.0e-12 73.2 69 53.6
TWI36G0711 Tripterygium wilfordii HOM05D005632 ORTHO05D006870 9.0e-12 73.2 69 53.6
Lalb_Chr07g0187331 Lupinus albus HOM05D005632 ORTHO05D006870 9.9e-11 69.7 35 91.4
Medtr8g080180 Medicago truncatula HOM05D005632 ORTHO05D006870 6.4e-10 67.0 43 76.7
CSS0014265 Camellia sinensis var. sinensis HOM05D005632 ORTHO05D006870 3.5e-08 61.2 49 67.3
Ca_18210_v3 Cicer arietinum L. HOM05D002431 ORTHO05D002543 2.3e-07 58.5 58 53.4
Sabra10G0070600 Salix brachista HOM05D002431 ORTHO05D002543 2.3e-07 58.5 57 52.6
Potri.008G144300 Populus trichocarpa HOM05D002431 ORTHO05D002543 3.9e-07 57.8 57 52.6
TWI18G1462 Tripterygium wilfordii HOM05D005632 ORTHO05D006870 3.9e-07 57.8 44 65.9
AUR62024154 Chenopodium quinoa HOM05D005632 ORTHO05D006870 5.1e-07 57.4 39 69.2
CAN.G282.81 Capsicum annuum HOM05D002431 ORTHO05D002543 8.7e-07 56.6 56 51.8
Psat7g086280 Pisum sativum HOM05D002431 ORTHO05D002543 8.7e-07 56.6 60 55.0
Sopen05g009890 Solanum pennellii HOM05D005632 ORTHO05D006870 1.1e-06 56.2 43 69.8
PGSC0003DMG400017445 Solanum tuberosum HOM05D005632 ORTHO05D006870 1.1e-06 56.2 43 69.8
TPR.G34762 Trifolium pratense HOM05D002431 ORTHO05D002543 1.1e-06 56.2 59 54.2
AUR62017841 Chenopodium quinoa HOM05D002431 ORTHO05D002543 1.9e-06 55.5 56 48.2
Duzib248G1043 Durio zibethinus HOM05D005632 ORTHO05D006870 2.5e-06 55.1 38 68.4
Gohir.D01G154266 Gossypium hirsutum HOM05D005632 ORTHO05D006870 2.5e-06 55.1 38 68.4
Gorai.002G191000 Gossypium raimondii HOM05D005632 ORTHO05D006870 2.5e-06 55.1 38 68.4
Lj6C822T14 Lonicera japonica HOM05D005632 ORTHO05D006870 2.5e-06 55.1 38 68.4
Glyma.08G090800 Glycine max HOM05D002431 ORTHO05D002543 3.3e-06 54.7 59 52.5
Lsat_1_v5_gn_4_26141 Lactuca sativa HOM05D002431 ORTHO05D002543 3.3e-06 54.7 59 49.2
MD13G1113300 Malus domestica HOM05D005632 ORTHO05D006870 3.3e-06 54.7 38 68.4
VMungo0251G0662 Vigna mungo HOM05D002431 ORTHO05D002543 3.3e-06 54.7 59 52.5
Dinv12783 Davidia involucrata HOM05D002431 ORTHO05D002543 4.3e-06 54.3 56 53.6
Sabra08G0109300 Salix brachista HOM05D002431 ORTHO05D002543 4.3e-06 54.3 57 49.1
Sc11g0000640 Simmondsia chinensis HOM05D005632 ORTHO05D006870 4.3e-06 54.3 38 71.1
TAR622G0018 Trochodendron aralioides HOM05D005632 ORTHO05D006870 4.3e-06 54.3 38 68.4
Atru.chr11.1045 Acer truncatum HOM05D002431 ORTHO05D002543 5.6e-06 53.9 56 48.2
Dinv28152 Davidia involucrata HOM05D002431 ORTHO05D002543 5.6e-06 53.9 56 51.8
HanXRQChr08g0207501 Helianthus annuus HOM05D005632 ORTHO05D006870 5.6e-06 53.9 40 67.5
Potri.010G098000 Populus trichocarpa HOM05D002431 ORTHO05D002543 7.4e-06 53.5 57 49.1
QL03p041928 Quercus lobata HOM05D002431 ORTHO05D002543 7.4e-06 53.5 56 48.2
TAR374G0791 Trochodendron aralioides HOM05D005632 ORTHO05D006870 7.4e-06 53.5 38 68.4
Gohir.A05G311200 Gossypium hirsutum HOM05D005632 ORTHO05D006870 9.6e-06 53.1 38 68.4
Lsat_1_v5_gn_8_149761 Lactuca sativa HOM05D005632 ORTHO05D006870 9.6e-06 53.1 41 65.9
Lj4g0002360 Lotus japonicus HOM05D002431 ORTHO05D002543 9.6e-06 53.1 55 49.1
Phvul.002G175800 Phaseolus vulgaris HOM05D005632 ORTHO05D006870 9.6e-06 53.1 33 75.8
Thecc.02G274700 Theobroma cacao HOM05D005632 ORTHO05D006870 9.6e-06 53.1 36 69.4


User provided reference genes

Program Settings