Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr13g0290441 Lupinus albus HOM05D004670 ORTHO05D008020 5.9e-271 937.2 563 100.0
Ca_16311_v3 Cicer arietinum L. HOM05D004670 ORTHO05D008020 5.8e-117 425.6 502 59.8
Psat5g107920 Pisum sativum HOM05D004670 ORTHO05D008020 3.7e-103 379.8 598 53.7
Phvul.008G212400 Phaseolus vulgaris HOM05D004670 ORTHO05D008020 3.7e-95 353.2 560 49.8
Glyma.15G017400 Glycine max HOM05D004670 ORTHO05D008020 1.2e-93 348.2 498 54.0
arahy.Tifrunner.gnm1.ann1.H9JUXY Arachis hypogaea HOM05D004670 ORTHO05D008020 4.5e-93 346.3 600 48.2
TPR.G23340 Trifolium pratense HOM05D004670 ORTHO05D008020 7.6e-93 345.5 500 57.6
Lj2g0025819 Lotus japonicus HOM05D004670 ORTHO05D008020 3.8e-92 343.2 586 51.9
VMungo0647G0492 Vigna mungo HOM05D004670 ORTHO05D008020 1.1e-91 341.7 483 54.5
Medtr3g081310 Medicago truncatula HOM05D004670 ORTHO05D008020 2.1e-90 337.4 599 50.8
TWI18G1064 Tripterygium wilfordii HOM05D004670 ORTHO05D008020 2.1e-90 337.4 503 55.1
Glyma.13G356700 Glycine max HOM05D004670 ORTHO05D008020 1.5e-88 331.3 497 52.5
Manes.13G000200 Manihot esculenta HOM05D004670 ORTHO05D008020 3.7e-87 326.6 471 57.1
Sed0002677 Sechium edule HOM05D004670 ORTHO05D008020 2.0e-85 320.9 488 50.6
MELO3C008575.2 Cucumis melo HOM05D004670 ORTHO05D008020 5.9e-85 319.3 483 49.9
CiPaw.07G084800 Carya illinoinensis HOM05D004670 ORTHO05D008020 1.0e-84 318.5 471 52.0
CsaV3_2G010440 Cucumis sativus L. HOM05D004670 ORTHO05D008020 1.4e-83 314.7 483 52.8
QL10p048429 Quercus lobata HOM05D004670 ORTHO05D008020 1.4e-83 314.7 503 49.7
Cfa014310 Carpinus fangiana HOM05D004670 ORTHO05D008020 2.5e-83 313.9 476 50.4
Thecc.06G195000 Theobroma cacao HOM05D004670 ORTHO05D008020 4.2e-83 313.2 536 51.3
Nitab4.5_0001348g0230 Nicotiana tabacum HOM05D004670 ORTHO05D008020 2.1e-82 310.8 529 51.8
Duzib150G0183 Durio zibethinus HOM05D004670 ORTHO05D008020 2.7e-82 310.5 584 49.3
Gorai.013G250400 Gossypium raimondii HOM05D004670 ORTHO05D008020 1.0e-81 308.5 495 53.5
Gohir.A13G215800 Gossypium hirsutum HOM05D004670 ORTHO05D008020 2.3e-81 307.4 495 53.3
SGA_v2.0_scaffold52G18920 Striga asiatica HOM05D004670 ORTHO05D008020 3.9e-81 306.6 498 37.8
Nitab4.5_0008751g0030 Nicotiana tabacum HOM05D004670 ORTHO05D008020 6.7e-81 305.8 529 48.8
Gohir.D13G219500 Gossypium hirsutum HOM05D004670 ORTHO05D008020 1.1e-80 305.1 495 50.3
Dinv17145 Davidia involucrata HOM05D004670 ORTHO05D008020 3.3e-80 303.5 504 52.0
MD00G1017000 Malus domestica HOM05D004670 ORTHO05D008020 1.3e-79 301.6 593 44.0
Atru.chr2.211 Acer truncatum HOM05D004670 ORTHO05D008020 4.8e-79 299.7 517 49.3
CANSAT54G2504 Cannabis sativa HOM05D004670 ORTHO05D008020 8.2e-79 298.9 576 48.6
PGSC0003DMG400006026 Solanum tuberosum HOM05D004670 ORTHO05D008020 2.4e-78 297.4 518 47.9
Prupe.6G365500 Prunus persica HOM05D004670 ORTHO05D008020 3.1e-78 297.0 491 52.1
TAR362G1162 Trochodendron aralioides HOM05D004670 ORTHO05D008020 2.6e-77 293.9 495 49.9
Haze_12758 Corylus avellana HOM05D004670 ORTHO05D008020 3.8e-76 290.0 323 48.6
CAN.G716.1 Capsicum annuum HOM05D004670 ORTHO05D008020 1.4e-75 288.1 517 48.0
Haze_20607 Corylus avellana HOM05D004670 ORTHO05D008020 5.5e-75 286.2 322 48.4
COL.COLO4_09284 Corchorus olitorius HOM05D004670 ORTHO05D008020 7.2e-75 285.8 557 45.4
Solyc11g005140.1 Solanum lycopersicum HOM05D004670 ORTHO05D008020 9.4e-75 285.4 569 43.6
Potri.001G361500 Populus trichocarpa HOM05D004670 ORTHO05D008020 1.2e-74 285.0 548 48.7
Sopen11g001140 Solanum pennellii HOM05D004670 ORTHO05D008020 1.2e-74 285.0 569 44.1
EL10Ac4g10032 Beta vulgaris HOM05D004670 ORTHO05D008020 1.6e-74 284.6 496 47.0
Peaxi162Scf00066g00021 Petunia axillaris HOM05D004670 ORTHO05D008020 1.6e-74 284.6 512 48.0
Sabra16G0238400 Salix brachista HOM05D004670 ORTHO05D008020 1.6e-74 284.6 506 50.6
Lsat_1_v5_gn_7_7580 Lactuca sativa HOM05D004670 ORTHO05D008020 3.9e-73 280.0 508 45.3
EL10Ac7g17697 Beta vulgaris HOM05D004670 ORTHO05D008020 5.1e-73 279.6 511 45.4
TPR.G9216 Trifolium pratense HOM05D004670 ORTHO05D008020 8.8e-73 278.9 488 37.3
Eucgr.B01443 Eucalyptus grandis HOM05D004670 ORTHO05D008020 1.5e-72 278.1 487 46.4
Lj8P583T10 Lonicera japonica HOM05D004670 ORTHO05D008020 2.0e-72 277.7 511 49.5
QL10p044086 Quercus lobata HOM05D004670 ORTHO05D008020 2.0e-72 277.7 351 46.2
Aqoxy3G03703 Aquilegia oxysepala HOM05D004670 ORTHO05D008020 4.4e-72 276.6 483 46.2
PSO017G2252 Papaver somniferum HOM05D004670 ORTHO05D008020 5.7e-72 276.2 516 49.4
Eucgr.L01231 Eucalyptus grandis HOM05D004670 ORTHO05D008020 4.8e-71 273.1 487 46.2
Ciclev10004046m.g Citrus clementina HOM05D004670 ORTHO05D008020 3.1e-70 270.4 482 48.8
RcHm_v2.0_Chr2g0131651 Rosa chinensis HOM05D004670 ORTHO05D008020 4.1e-70 270.0 483 50.5
Ah.06g195210 Amaranthus hybridus HOM05D004670 ORTHO05D008020 1.7e-68 264.6 509 44.6
MBI07_g36706_MAGBIO Magnolia biondii HOM05D004670 ORTHO05D008020 1.7e-68 264.6 497 45.9
HanXRQChr16g0532601 Helianthus annuus HOM05D004670 ORTHO05D008020 6.5e-68 262.7 495 46.5
Nn1g09528 Nelumbo nucifera HOM05D004670 ORTHO05D008020 6.5e-68 262.7 343 44.0
CSS0027504 Camellia sinensis var. sinensis HOM05D004670 ORTHO05D008020 1.1e-67 261.9 495 47.5
CSS0030730 Camellia sinensis var. sinensis HOM05D004670 ORTHO05D008020 1.1e-67 261.9 495 47.5
ECA236G4653 Erigeron canadensis HOM05D004670 ORTHO05D008020 1.9e-67 261.2 474 47.3
FAN14G3835 Fragaria x ananassa HOM05D004670 ORTHO05D008020 1.9e-67 261.2 569 46.0
Oeu040399.1 Olea europaea HOM05D004670 ORTHO05D008020 3.2e-67 260.4 494 46.6
Sc16g0010690 Simmondsia chinensis HOM05D004670 ORTHO05D008020 9.4e-67 258.8 478 46.4
Cc10_g12810 Coffea canephora HOM05D004670 ORTHO05D008020 1.2e-66 258.5 540 46.9
FvH4_6g27990 Fragaria vesca HOM05D004670 ORTHO05D008020 1.2e-66 258.5 569 45.9
HanXRQChr02g0056371 Helianthus annuus HOM05D004670 ORTHO05D008020 2.1e-66 257.7 477 47.0
SalBow7G4343 Salvia bowleyana HOM05D004670 ORTHO05D008020 3.6e-66 256.9 455 35.6
PSO675G7837 Papaver somniferum HOM05D004670 ORTHO05D008020 1.0e-65 255.4 515 48.2
AUR62025405 Chenopodium quinoa HOM05D004670 ORTHO05D008020 1.8e-65 254.6 501 43.9
PGR119G2020 Punica granatum HOM05D004670 ORTHO05D008020 1.8e-65 254.6 469 46.7
SalBow7G3652 Salvia bowleyana HOM05D004670 ORTHO05D008020 1.8e-65 254.6 455 35.4
MSTRG.25359 Avicennia marina HOM05D004670 ORTHO05D008020 2.3e-65 254.2 468 46.8
Migut.C01066 Erythranthe guttata HOM05D004670 ORTHO05D008020 2.0e-64 251.1 570 42.3
AUR62008838 Chenopodium quinoa HOM05D004670 ORTHO05D008020 4.4e-64 250.0 502 44.6
ECA246G0724 Erigeron canadensis HOM05D004670 ORTHO05D008020 7.4e-64 249.2 521 44.5
DCAR_024376 Daucus carota HOM05D004670 ORTHO05D008020 1.7e-63 248.1 501 45.5
Rhsim05G0163600 Rhododendron simsii HOM05D004670 ORTHO05D008020 2.4e-62 244.2 523 44.0
Lj6g0018960 Lotus japonicus HOM05D004670 ORTHO05D008020 1.0e-60 238.8 582 42.8
CDE06G0776 Ceratophyllum demersum HOM05D004670 ORTHO05D008020 1.9e-59 234.6 348 39.9
AT3G02650 Arabidopsis thaliana HOM05D004670 ORTHO05D008020 5.5e-59 233.0 506 46.2
THA.LOC104802429 Tarenaya hassleriana HOM05D004670 ORTHO05D008020 2.7e-58 230.7 500 45.0
THA.LOC104827168 Tarenaya hassleriana HOM05D004670 ORTHO05D008020 2.7e-58 230.7 478 47.3
ATR0743G160 Amborella trichopoda HOM05D004670 ORTHO05D008020 1.8e-57 228.0 510 43.1
SHI13694 Sapria himalayana HOM05D004670 ORTHO05D008020 3.0e-57 227.3 476 45.8
AL3G12030 Arabidopsis lyrata HOM05D004670 ORTHO05D008020 4.0e-57 226.9 491 46.8
Thhalv10020352m.g Eutrema salsugineum HOM05D004670 ORTHO05D008020 4.0e-57 226.9 490 40.6
AUR62044648 Chenopodium quinoa HOM05D004670 ORTHO05D008020 1.3e-55 221.9 338 38.8
BolC1t05888H Brassica oleracea HOM05D004670 ORTHO05D008020 1.1e-54 218.8 493 45.4
Carub.0003s0177 Capsella rubella HOM05D004670 ORTHO05D008020 5.9e-53 213.0 497 44.7
Sp3g01690 Schrenkiella parvula HOM05D004670 ORTHO05D008020 1.7e-52 211.5 510 44.3
BNapus_Darmor_BZH_scaffold_99p00180 Brassica napus HOM05D004670 ORTHO05D008020 8.5e-52 209.1 511 45.8
BraSC246t45824Z Brassica rapa HOM05D004670 ORTHO05D008020 8.5e-52 209.1 493 45.0
CARHR076670 Cardamine hirsuta HOM05D004670 ORTHO05D008020 8.5e-52 209.1 511 44.2
A03p33060 Brassica napus HOM05D004670 ORTHO05D008020 1.5e-51 208.4 503 45.1
BraA03t12476Z Brassica rapa HOM05D004670 ORTHO05D008020 7.2e-51 206.1 504 45.2
Thecc.09G224400 Theobroma cacao HOM05D004670 ORTHO05D008020 2.3e-49 201.1 458 47.6
BcaC01g04430 Brassica carinata HOM05D004670 ORTHO05D008020 2.0e-48 198.0 564 40.6
BolC3t16289H Brassica oleracea HOM05D004670 ORTHO05D008020 2.0e-48 198.0 564 40.6
Cpa.g.sc127.45 Carica papaya HOM05D004670 ORTHO05D008020 2.0e-48 198.0 514 44.4
BNapus_Darmor_BZH_scaffold_122p00150 Brassica napus HOM05D004670 ORTHO05D008020 9.8e-48 195.7 325 36.3
C03p40240 Brassica napus HOM05D004670 ORTHO05D008020 1.3e-47 195.3 324 35.2
TPR.G17089 Trifolium pratense HOM05D004670 ORTHO05D014137 1.7e-47 194.9 328 40.9
BcaB04g19393 Brassica carinata HOM05D004670 ORTHO05D008020 2.4e-46 191.0 502 43.2
Medtr8g105355 Medicago truncatula HOM05D004670 ORTHO05D014137 2.3e-44 184.5 328 38.4
Medtr8g105450 Medicago truncatula HOM05D004670 ORTHO05D014137 2.3e-44 184.5 328 38.4
HPP92_012838 Vanilla planifolia HOM05D004670 ORTHO05D008020 6.6e-44 183.0 490 38.4
Medtr5g092030 Medicago truncatula HOM05D004670 ORTHO05D014137 5.6e-43 179.9 428 33.6
TPR.G5228 Trifolium pratense HOM05D002798 ORTHO05D003052 2.8e-42 177.6 330 39.4
PGR119G2157 Punica granatum HOM05D004670 ORTHO05D008020 1.8e-41 174.9 491 28.1
Zm00001eb144640 Zea mays HOM05D004670 ORTHO05D008020 1.2e-40 172.2 582 38.3
Dinv17144 Davidia involucrata HOM05D004670 ORTHO05D008020 1.5e-40 171.8 174 50.0
TPR.G25089 Trifolium pratense HOM05D004670 ORTHO05D014137 2.9e-39 167.5 335 36.1
Medtr5g088900 Medicago truncatula HOM05D004670 ORTHO05D014137 2.6e-32 144.4 335 35.8
CSS0025547 Camellia sinensis var. sinensis HOM05D004670 ORTHO05D008020 3.4e-32 144.1 327 35.8
AUR62000265 Chenopodium quinoa HOM05D004670 ORTHO05D008020 7.5e-32 142.9 570 26.7
AUR62006613 Chenopodium quinoa HOM05D004670 ORTHO05D008020 4.3e-27 127.1 359 29.0
SEGI_06910 Sequoiadendron giganteum HOM05D004670 ORTHO05D008020 4.3e-27 127.1 320 26.9
AUR62008837 Chenopodium quinoa HOM05D004670 ORTHO05D008020 8.3e-23 112.8 376 27.1
Ca_09603_v3 Cicer arietinum L. HOM05D004670 ORTHO05D014137 8.3e-23 112.8 190 41.6
Cpa.g.sc35.62 Carica papaya HOM05D004670 ORTHO05D022223 1.2e-21 109.0 191 37.7
Medtr3g108743 Medicago truncatula HOM05D030372 ORTHO05D025854 1.0e-20 105.9 81 60.5
TPR.G5188 Trifolium pratense HOM05D004670 ORTHO05D008020 5.6e-19 100.1 155 41.3
Medtr1g102600 Medicago truncatula HOM05D004670 ORTHO05D266903 1.4e-17 95.5 137 40.9
VMungo1080G1842 Vigna mungo HOM05D004670 ORTHO05D014137 3.2e-14 84.3 55 74.5
Medtr8g080260 Medicago truncatula HOM05D004670 ORTHO05D014137 6.6e-12 76.6 149 37.6
Oeu039630.1 Olea europaea HOM05D004670 ORTHO05D025854 2.5e-11 74.7 151 64.2
Medtr5g095780 Medicago truncatula HOM05D004670 ORTHO05D008020 1.4e-09 68.9 68 48.5
TPR.G10813 Trifolium pratense HOM05D004670 ORTHO05D008020 2.4e-09 68.2 54 61.1
VMungo1215G2433 Vigna mungo HOM05D004670 ORTHO05D014137 2.4e-09 68.2 55 69.1
AUR62044649 Chenopodium quinoa HOM05D004670 ORTHO05D008020 5.2e-09 67.0 43 72.1
Cpa.g.c31883 Carica papaya HOM05D004670 ORTHO05D022223 8.9e-09 66.2 107 39.3
Sed0026458 Sechium edule HOM05D008684 ORTHO05D010796 3.8e-07 60.8 396 20.2
Os01g0897500 Oryza sativa ssp. japonica HOM05D004670 ORTHO05D008020 1.1e-06 59.3 43 65.1


User provided reference genes

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