Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 1.9e-110 402.5 204 100.0
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 1.3e-82 310.1 204 75.5
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 4.6e-80 301.6 204 74.0
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 6.0e-80 301.2 204 74.0
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 3.1e-76 288.9 207 72.0
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 2.6e-75 285.8 204 70.6
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 7.6e-75 284.3 204 71.6
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 9.9e-75 283.9 208 71.2
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 2.9e-74 282.3 203 71.4
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 4.2e-73 278.5 204 69.6
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 9.0e-68 260.8 164 78.0
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 4.5e-59 231.9 188 63.8
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 4.5e-59 231.9 204 59.3
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 5.5e-57 224.9 195 60.0
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 1.2e-56 223.8 188 60.6
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 1.6e-56 223.4 197 61.4
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 2.1e-56 223.0 197 61.4
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 4.6e-56 221.9 195 58.5
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 1.0e-55 220.7 202 59.4
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 1.8e-55 219.9 171 62.6
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 2.3e-55 219.5 212 56.6
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 3.9e-55 218.8 197 60.4
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 3.9e-55 218.8 176 64.2
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 5.1e-55 218.4 187 63.1
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 6.7e-55 218.0 196 58.2
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 8.7e-55 217.6 204 57.4
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 1.9e-54 216.5 196 58.7
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 3.3e-54 215.7 184 60.3
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 4.3e-54 215.3 204 56.9
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 4.3e-54 215.3 186 62.9
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 5.6e-54 214.9 174 61.5
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 5.6e-54 214.9 179 62.0
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 7.4e-54 214.5 204 57.4
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 9.6e-54 214.2 197 56.9
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 9.6e-54 214.2 197 57.4
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 9.6e-54 214.2 187 57.2
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 1.6e-53 213.4 195 59.5
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 6.2e-53 211.5 204 55.9
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 1.1e-52 210.7 189 57.1
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 1.1e-52 210.7 186 60.8
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 3.1e-52 209.1 188 60.1
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 5.3e-52 208.4 188 58.5
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 9.0e-52 207.6 171 61.4
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 1.2e-51 207.2 193 55.4
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 2.6e-51 206.1 179 59.2
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 4.5e-51 205.3 179 60.9
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 4.5e-51 205.3 169 63.3
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 7.6e-51 204.5 188 60.1
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 1.0e-50 204.1 189 56.1
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.0e-50 204.1 184 60.9
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 1.7e-50 203.4 201 52.7
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 1.7e-50 203.4 167 62.3
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 2.2e-50 203.0 190 57.4
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 2.2e-50 203.0 169 62.1
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 2.9e-50 202.6 167 62.3
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 2.9e-50 202.6 200 57.0
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 3.8e-50 202.2 168 59.5
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 6.5e-50 201.4 190 57.9
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 1.4e-49 200.3 169 60.9
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 1.9e-49 199.9 187 54.0
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 2.5e-49 199.5 183 57.4
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 4.2e-49 198.7 178 58.4
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 4.2e-49 198.7 185 57.3
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 7.1e-49 198.0 233 49.4
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 9.3e-49 197.6 200 54.5
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 1.2e-48 197.2 201 54.2
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 1.6e-48 196.8 182 57.1
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 2.7e-48 196.1 185 57.3
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 3.0e-47 192.6 181 56.9
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 1.1e-46 190.7 175 58.3
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 1.9e-46 189.9 202 52.5
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 2.5e-46 189.5 176 57.4
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 4.3e-46 188.7 207 52.7
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 1.3e-45 187.2 176 55.1
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 2.1e-45 186.4 200 50.0
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 2.8e-45 186.0 185 54.6
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 6.3e-45 184.9 173 53.8
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 6.9e-44 181.4 170 53.5
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 2.0e-43 179.9 201 50.7
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 2.9e-42 176.0 188 54.3
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 2.9e-42 176.0 186 48.9
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 6.5e-42 174.9 111 77.5
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 3.9e-39 165.6 186 50.0
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 3.9e-39 165.6 207 47.3
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 8.7e-39 164.5 179 52.0
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 3.3e-38 162.5 191 49.7
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 4.3e-38 162.2 195 48.2
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 5.7e-38 161.8 198 48.0
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 9.7e-38 161.0 191 50.3
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 9.7e-38 161.0 195 48.2
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 1.8e-36 156.8 187 48.7
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 1.8e-36 156.8 187 47.6
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 2.4e-36 156.4 187 49.7
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 3.1e-36 156.0 188 50.0
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 6.9e-36 154.8 156 51.9
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 1.5e-35 153.7 189 48.7
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 1.5e-35 153.7 189 48.7
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 2.0e-35 153.3 188 48.9
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 4.5e-35 152.1 188 48.4
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 4.5e-35 152.1 188 48.4
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 4.5e-35 152.1 187 48.1
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 5.9e-35 151.8 188 48.9
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 5.9e-35 151.8 190 48.4
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 7.7e-35 151.4 177 49.7
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 4.2e-33 145.6 94 73.4
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 1.8e-31 140.2 187 44.4
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 8.8e-31 137.9 128 60.2
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 4.8e-29 132.1 173 45.1
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 2.6e-27 126.3 172 39.0
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 2.2e-26 123.2 111 59.5
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 3.2e-17 92.8 203 32.5
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 4.7e-16 89.0 186 33.9
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 9.7e-14 81.3 100 46.0
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 1.3e-13 80.9 204 28.9
Ca_19566_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 5.9e-11 72.0 39 87.2
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 1.1e-09 67.8 104 37.5


User provided reference genes

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