Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0208391 Lupinus albus HOM05D004001 ORTHO05D004559 0.0e+00 1530.4 871 100.0
Lalb_Chr12g0208441 Lupinus albus HOM05D004001 ORTHO05D004559 0.0e+00 1530.4 871 100.0
Lalb_Chr07g0189651 Lupinus albus HOM05D004001 ORTHO05D004559 0.0e+00 1220.7 874 82.3
Glyma.18G221900 Glycine max HOM05D004001 ORTHO05D004559 3.1e-303 1045.0 843 77.2
arahy.Tifrunner.gnm1.ann1.EYC1DY Arachis hypogaea HOM05D004001 ORTHO05D004559 5.5e-292 1007.7 866 72.9
arahy.Tifrunner.gnm1.ann1.9J1L2I Arachis hypogaea HOM05D004001 ORTHO05D004559 6.1e-291 1004.2 884 71.8
arahy.Tifrunner.gnm1.ann1.2UV9R4 Arachis hypogaea HOM05D004001 ORTHO05D004559 2.7e-286 988.8 857 72.0
arahy.Tifrunner.gnm1.ann1.CI1NNE Arachis hypogaea HOM05D004001 ORTHO05D004559 1.4e-282 976.5 852 71.5
arahy.Tifrunner.gnm1.ann1.0Y1PWL Arachis hypogaea HOM05D004001 ORTHO05D004559 3.0e-282 975.3 852 66.9
arahy.Tifrunner.gnm1.ann1.H5PXMS Arachis hypogaea HOM05D004001 ORTHO05D004559 9.5e-276 953.7 845 70.5
Ca_07831_v3 Cicer arietinum L. HOM05D004001 ORTHO05D004559 4.4e-273 944.9 870 69.8
Lj1g0027935 Lotus japonicus HOM05D004001 ORTHO05D004559 7.5e-273 944.1 857 70.4
Phvul.008G075200 Phaseolus vulgaris HOM05D004001 ORTHO05D004559 1.2e-267 926.8 862 68.8
Psat3g115320 Pisum sativum HOM05D004001 ORTHO05D004559 1.7e-264 916.4 878 67.5
Medtr7g075140 Medicago truncatula HOM05D004001 ORTHO05D004559 1.6e-262 909.8 880 68.2
Glyma.09G268000 Glycine max HOM05D004001 ORTHO05D004559 2.8e-259 899.0 864 64.4
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.3e-248 863.6 882 59.8
QL08p051978 Quercus lobata HOM05D004001 ORTHO05D004559 3.3e-244 849.0 907 60.9
Actinidia12272 Actinidia chinensis HOM05D004001 ORTHO05D004559 6.2e-243 844.7 877 59.2
Haze_16831 Corylus avellana HOM05D004001 ORTHO05D004559 1.9e-239 833.2 869 60.8
Actinidia31422 Actinidia chinensis HOM05D004001 ORTHO05D004559 1.2e-238 830.5 880 58.6
arahy.Tifrunner.gnm1.ann1.JKPH3R Arachis hypogaea HOM05D004001 ORTHO05D004559 3.8e-232 808.9 815 61.0
Cfa001702 Carpinus fangiana HOM05D004001 ORTHO05D004559 5.4e-231 805.1 864 59.7
CiPaw.01G260600 Carya illinoinensis HOM05D004001 ORTHO05D004559 4.6e-230 802.0 865 58.3
Atru.chr5.325 Acer truncatum HOM05D004001 ORTHO05D004559 1.3e-229 800.4 858 57.0
MD02G1201400 Malus domestica HOM05D004001 ORTHO05D004559 1.1e-228 797.3 875 61.7
CANSAT56G0321 Cannabis sativa HOM05D004001 ORTHO05D004559 6.9e-226 788.1 856 57.9
TAR629G2254 Trochodendron aralioides HOM05D004001 ORTHO05D004559 9.3e-223 777.7 893 55.8
RcHm_v2.0_Chr1g0350831 Rosa chinensis HOM05D004001 ORTHO05D004559 1.1e-220 770.8 876 58.9
TAR636G3381 Trochodendron aralioides HOM05D004001 ORTHO05D004559 4.8e-219 765.4 880 55.3
Thecc.01G374400 Theobroma cacao HOM05D004001 ORTHO05D004559 3.1e-218 762.7 888 55.4
Potri.014G071400 Populus trichocarpa HOM05D004001 ORTHO05D004559 4.0e-218 762.3 865 54.6
Eucgr.E01409 Eucalyptus grandis HOM05D004001 ORTHO05D004559 1.4e-215 753.8 872 58.0
Duzib138G1007 Durio zibethinus HOM05D004001 ORTHO05D004559 7.9e-214 748.0 879 54.5
Lj9C572T3 Lonicera japonica HOM05D004001 ORTHO05D004559 2.3e-213 746.5 876 59.2
Cc02_g36540 Coffea canephora HOM05D004001 ORTHO05D004559 5.1e-213 745.3 898 57.0
CsaV3_3G009550 Cucumis sativus L. HOM05D004001 ORTHO05D004559 6.7e-213 745.0 873 54.8
Manes.05G044000 Manihot esculenta HOM05D004001 ORTHO05D004559 2.2e-211 740.0 847 55.5
Gorai.007G092200 Gossypium raimondii HOM05D004001 ORTHO05D004559 9.0e-210 734.6 885 54.0
TWI14G1161 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 9.0e-210 734.6 878 54.1
Rhsim07G0025900 Rhododendron simsii HOM05D004001 ORTHO05D004559 1.5e-209 733.8 761 59.5
TPR.G26922 Trifolium pratense HOM05D004001 ORTHO05D004559 4.5e-209 732.3 824 55.8
Rhsim07G0026000 Rhododendron simsii HOM05D004001 ORTHO05D004559 1.7e-208 730.3 791 57.4
Solyc01g091500.3 Solanum lycopersicum HOM05D004001 ORTHO05D004559 2.9e-208 729.6 902 51.9
Prupe.2G147400 Prunus persica HOM05D004001 ORTHO05D004559 3.8e-208 729.2 776 63.8
Nitab4.5_0010473g0020 Nicotiana tabacum HOM05D004001 ORTHO05D004559 8.5e-208 728.0 892 52.6
FAN03G0266 Fragaria x ananassa HOM05D004001 ORTHO05D004559 1.2e-206 724.2 894 56.9
Sopen01g037250 Solanum pennellii HOM05D004001 ORTHO05D004559 1.2e-206 724.2 895 51.8
COL.COLO4_12572 Corchorus olitorius HOM05D004001 ORTHO05D004559 1.1e-204 717.6 800 60.8
Gohir.D12G105400 Gossypium hirsutum HOM05D004001 ORTHO05D004559 2.0e-204 716.8 844 58.1
FAN06G2206 Fragaria x ananassa HOM05D004001 ORTHO05D004559 3.3e-204 716.1 876 52.6
FAN10G1409 Fragaria x ananassa HOM05D004001 ORTHO05D004559 9.7e-204 714.5 876 52.5
SalBow5G4135 Salvia bowleyana HOM05D004001 ORTHO05D004559 1.3e-203 714.1 897 53.6
FvH4_7g12090 Fragaria vesca HOM05D004001 ORTHO05D004559 3.7e-203 712.6 876 52.7
Gohir.D11G086300 Gossypium hirsutum HOM05D004001 ORTHO05D004559 3.7e-203 712.6 885 53.3
FAN10G1690 Fragaria x ananassa HOM05D004001 ORTHO05D004559 2.4e-202 709.9 851 53.1
FAN06G4715 Fragaria x ananassa HOM05D004001 ORTHO05D004559 5.3e-202 708.8 876 52.2
MSTRG.20759 Avicennia marina HOM05D004001 ORTHO05D004559 1.2e-201 707.6 927 52.4
PGSC0003DMG400012752 Solanum tuberosum HOM05D004001 ORTHO05D004559 7.7e-201 704.9 900 52.7
Sabra14G0050700 Salix brachista HOM05D004001 ORTHO05D004559 1.6e-198 697.2 864 52.8
ClCG05G002120 Citrullus lanatus HOM05D004001 ORTHO05D004559 6.1e-198 695.3 968 49.4
Nitab4.5_0004320g0020 Nicotiana tabacum HOM05D004001 ORTHO05D004559 2.3e-197 693.3 911 50.7
PSO782G3046 Papaver somniferum HOM05D004001 ORTHO05D004559 3.7e-195 686.0 851 52.4
Aqoxy7G00586 Aquilegia oxysepala HOM05D004001 ORTHO05D004559 3.1e-194 682.9 875 52.8
Sc26g0001190 Simmondsia chinensis HOM05D004001 ORTHO05D004559 3.1e-194 682.9 866 53.3
HanXRQChr03g0093811 Helianthus annuus HOM05D004001 ORTHO05D004559 9.1e-194 681.4 868 56.6
Gorai.008G114700 Gossypium raimondii HOM05D004001 ORTHO05D004559 1.5e-193 680.6 905 49.8
PSO478G3708 Papaver somniferum HOM05D004001 ORTHO05D004559 3.5e-193 679.5 861 50.3
CAN.G170.4 Capsicum annuum HOM05D004001 ORTHO05D004559 5.9e-193 678.7 901 50.6
GSVIVG01027630001 Vitis vinifera HOM05D004001 ORTHO05D004559 5.9e-193 678.7 874 51.7
Ciclev10018784m.g Citrus clementina HOM05D004001 ORTHO05D004559 8.5e-192 674.9 865 51.2
Nn4g26437 Nelumbo nucifera HOM05D004001 ORTHO05D004559 2.6e-185 653.3 882 50.0
EL10Ac1g00911 Beta vulgaris HOM05D004001 ORTHO05D004559 6.5e-184 648.7 880 49.4
BcaB02g08998 Brassica carinata HOM05D004001 ORTHO05D004559 1.2e-182 644.4 890 52.9
AUR62013619 Chenopodium quinoa HOM05D004001 ORTHO05D004559 6.1e-182 642.1 825 51.9
vmacro13388 Vaccinium macrocarpon HOM05D004001 ORTHO05D004559 5.2e-181 639.0 747 56.8
SGA_v2.0_scaffold95G28893 Striga asiatica HOM05D004001 ORTHO05D004559 7.5e-180 635.2 875 53.8
CARHR140650 Cardamine hirsuta HOM05D004001 ORTHO05D004559 2.8e-179 633.3 881 51.8
MELO3C006177.2 Cucumis melo HOM05D004001 ORTHO05D004559 4.8e-179 632.5 873 53.3
Migut.B01647 Erythranthe guttata HOM05D004001 ORTHO05D004559 6.3e-179 632.1 883 54.6
AL4G44630 Arabidopsis lyrata HOM05D004001 ORTHO05D004559 8.3e-179 631.7 896 50.8
Sp4g27490 Schrenkiella parvula HOM05D004001 ORTHO05D004559 8.3e-179 631.7 879 52.2
Hund17008 Selenicereus undatus HOM05D004001 ORTHO05D004559 1.8e-178 630.6 947 47.5
ECA240G2591 Erigeron canadensis HOM05D004001 ORTHO05D004559 1.2e-177 627.9 817 55.9
AT2G45460 Arabidopsis thaliana HOM05D004001 ORTHO05D004559 6.5e-176 622.1 892 50.6
C04p06430 Brassica napus HOM05D004001 ORTHO05D004559 6.8e-173 612.1 872 51.9
BcaC02g12205 Brassica carinata HOM05D004001 ORTHO05D004559 1.2e-172 611.3 872 51.9
Peaxi162Scf00021g01316 Petunia axillaris HOM05D004001 ORTHO05D004559 3.4e-172 609.8 892 47.0
A05p05490 Brassica napus HOM05D004001 ORTHO05D004559 4.4e-172 609.4 878 51.1
Gohir.A12G102200 Gossypium hirsutum HOM05D004001 ORTHO05D004559 4.4e-172 609.4 897 47.0
BolC4t22266H Brassica oleracea HOM05D004001 ORTHO05D004559 4.9e-171 605.9 887 50.4
Oeu037907.1 Olea europaea HOM05D004001 ORTHO05D004559 6.3e-171 605.5 893 48.4
Aa31LG1G26960 Aethionema arabicum HOM05D004001 ORTHO05D004559 8.3e-171 605.1 904 50.2
PGR042G2753 Punica granatum HOM05D004001 ORTHO05D004559 8.3e-171 605.1 950 48.9
AUR62004229 Chenopodium quinoa HOM05D004001 ORTHO05D004559 4.5e-169 599.4 915 47.4
Lj7C526G13 Lonicera japonica HOM05D004001 ORTHO05D004559 1.1e-167 594.7 874 47.3
Thhalv10001303m.g Eutrema salsugineum HOM05D004001 ORTHO05D004559 1.2e-166 591.3 849 50.3
Lsat_1_v5_gn_3_133301 Lactuca sativa HOM05D004001 ORTHO05D004559 1.6e-166 590.9 867 52.6
BraA05t19519Z Brassica rapa HOM05D004001 ORTHO05D004559 6.1e-166 589.0 893 49.0
Carub.0004s2807 Capsella rubella HOM05D004001 ORTHO05D004559 3.2e-162 576.6 893 48.0
Sed0014964 Sechium edule HOM05D004001 ORTHO05D004559 2.7e-161 573.5 771 51.6
unitig_8.g3817 Utricularia gibba HOM05D004001 ORTHO05D004559 5.2e-157 559.3 840 46.0
CDE04G0282 Ceratophyllum demersum HOM05D004001 ORTHO05D004559 3.2e-154 550.1 847 46.0
Gohir.A11G081700 Gossypium hirsutum HOM05D004001 ORTHO05D004559 2.3e-149 533.9 884 48.3
MBI11_g23939_MAGBIO Magnolia biondii HOM05D004001 ORTHO05D004559 1.5e-148 531.2 741 56.0
Os03g0127600 Oryza sativa ssp. japonica HOM05D004001 ORTHO05D004559 9.5e-143 511.9 866 42.5
CSS0038978 Camellia sinensis var. sinensis HOM05D004001 ORTHO05D004559 2.0e-140 504.2 426 65.5
SGA_v2.0_scaffold153G37027 Striga asiatica HOM05D004001 ORTHO05D001724 8.6e-136 488.8 872 43.0
Ah.16g103740 Amaranthus hybridus HOM05D004001 ORTHO05D004559 1.1e-130 471.9 902 43.1
Zm00001eb403560 Zea mays HOM05D004001 ORTHO05D004559 3.6e-126 456.8 862 40.4
Zm00001eb002020 Zea mays HOM05D004001 ORTHO05D004559 8.7e-120 435.6 832 43.1
VMungo1383G1498 Vigna mungo HOM05D004001 ORTHO05D004559 1.7e-115 421.4 387 68.0
ATR0757G164 Amborella trichopoda HOM05D004001 ORTHO05D004559 9.3e-114 415.6 891 41.2
SHI13515 Sapria himalayana HOM05D004001 ORTHO05D004559 3.0e-112 410.6 472 52.5
arahy.Tifrunner.gnm1.ann1.RB3Z54 Arachis hypogaea HOM05D004001 ORTHO05D004559 1.2e-100 372.1 528 48.7
SEGI_05063 Sequoiadendron giganteum HOM05D004001 ORTHO05D004559 2.6e-100 370.9 872 38.3
arahy.Tifrunner.gnm1.ann1.5M5P73 Arachis hypogaea HOM05D004001 ORTHO05D004559 5.7e-87 326.6 420 51.0
DCAR_006877 Daucus carota HOM05D004001 ORTHO05D004559 1.3e-86 325.5 431 48.5
HPP92_018394 Vanilla planifolia HOM05D004001 ORTHO05D004559 2.8e-86 324.3 663 42.7
unitig_31.g34038 Utricularia gibba HOM05D004001 ORTHO05D004559 2.9e-83 314.3 629 39.0
DCAR_006876 Daucus carota HOM05D004001 ORTHO05D004559 3.3e-79 300.8 408 51.7
CSS0022656 Camellia sinensis var. sinensis HOM05D004001 ORTHO05D004559 1.6e-76 292.0 414 50.5
AagrBONN_evm.TU.Sc2ySwM_362.1643 Anthoceros agrestis HOM05D004001 ORTHO05D004559 1.9e-74 285.0 595 41.5
SalBow3G1117 Salvia bowleyana HOM05D004001 ORTHO05D004559 6.3e-70 270.0 232 60.8
Actinidia33460 Actinidia chinensis HOM05D004001 ORTHO05D004559 2.9e-59 234.6 180 66.7
VMungo1383G3044 Vigna mungo HOM05D004001 ORTHO05D004559 3.0e-56 224.6 142 79.6
Mapoly0005s0201 Marchantia polymorpha HOM05D004001 ORTHO05D004559 2.8e-49 201.4 802 33.7
Oeu005774.1 Olea europaea HOM05D004001 ORTHO05D004559 6.1e-49 200.3 214 56.5
Pp3c5_28010 Physcomitrium patens HOM05D004001 ORTHO05D004559 2.2e-46 191.8 543 37.8
vmacro13387 Vaccinium macrocarpon HOM05D004001 ORTHO05D004559 5.6e-42 177.2 145 60.7
arahy.Tifrunner.gnm1.ann1.63QVJR Arachis hypogaea HOM05D004001 ORTHO05D004559 1.0e-40 172.9 497 39.8
arahy.Tifrunner.gnm1.ann1.2V3ERI Arachis hypogaea HOM05D004001 ORTHO05D004559 4.0e-40 171.0 497 39.6
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea HOM05D005562 ORTHO05D007785 2.7e-36 158.3 159 66.0
SEGI_21780 Sequoiadendron giganteum HOM05D004001 ORTHO05D004559 8.9e-32 143.3 639 30.2
arahy.Tifrunner.gnm1.ann1.K6PBMX Arachis hypogaea HOM05D004001 ORTHO05D004559 5.8e-31 140.6 170 52.4
arahy.Tifrunner.gnm1.ann1.LXQN6Z Arachis hypogaea HOM05D004001 ORTHO05D004559 3.7e-30 137.9 470 33.0
CBR_g40168 Chara braunii HOM05D004001 ORTHO05D004559 6.4e-30 137.1 618 28.0
Mapoly0048s0074 Marchantia polymorpha HOM05D004001 ORTHO05D004559 2.4e-29 135.2 247 36.4
Hma1.2p1_1793F.1_g302630 Hydrangea macrophylla HOM05D004001 ORTHO05D004559 7.8e-28 130.2 102 60.8
Hma1.2p1_3528F.1_g336625 Hydrangea macrophylla HOM05D004001 ORTHO05D004559 7.8e-28 130.2 102 60.8
Hma1.2p1_1793F.1_g302640 Hydrangea macrophylla HOM05D004001 ORTHO05D004559 6.6e-27 127.1 104 63.5
Rhsim07G0026800 Rhododendron simsii HOM05D004001 ORTHO05D004559 5.6e-26 124.0 250 41.6
arahy.Tifrunner.gnm1.ann1.7YWS89 Arachis hypogaea HOM05D004001 ORTHO05D004559 7.3e-26 123.6 493 35.9
arahy.Tifrunner.gnm1.ann1.FJEF2G Arachis hypogaea HOM05D004001 ORTHO05D004559 2.1e-25 122.1 211 45.5
arahy.Tifrunner.gnm1.ann1.DK59KL Arachis hypogaea HOM05D004001 ORTHO05D004559 1.5e-23 115.9 152 48.7
Cpa.g.sc18.133 Carica papaya HOM05D004001 ORTHO05D004559 4.4e-23 114.4 281 44.1
TWI56G0444 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 8.9e-16 90.1 157 39.5
EL10Ac2g04735 Beta vulgaris HOM05D002948 ORTHO05D003577 1.2e-15 89.7 109 46.8
Psat6g122920 Pisum sativum HOM05D004001 ORTHO05D004559 2.2e-14 85.5 45 88.9
TWI56G1146 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 1.4e-13 82.8 166 37.3
vmacro22718 Vaccinium macrocarpon HOM05D004001 ORTHO05D004559 1.4e-13 82.8 66 69.7
arahy.Tifrunner.gnm1.ann1.8X1DD2 Arachis hypogaea HOM05D004001 ORTHO05D004559 1.9e-13 82.4 97 50.5
TWI56G0921 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 1.9e-13 82.4 152 38.8
TWI56G1317 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 1.9e-13 82.4 152 38.8
arahy.Tifrunner.gnm1.ann1.Y88425 Arachis hypogaea HOM05D004001 ORTHO05D004559 2.4e-13 82.0 50 76.0
TWI56G0254 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 9.3e-13 80.1 158 38.6
TWI56G1263 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 9.3e-13 80.1 158 38.6
SMO147G0240 Selaginella moellendorffii HOM05D004001 ORTHO05D004559 1.0e-11 76.6 302 29.8
arahy.Tifrunner.gnm1.ann1.YQ72RL Arachis hypogaea HOM05D004001 ORTHO05D004559 4.3e-10 71.2 181 35.9
Hma1.2p1_3528F.1_g336630 Hydrangea macrophylla HOM05D004001 ORTHO05D004559 5.3e-08 64.3 48 70.8
Dinv00153 Davidia involucrata HOM05D004001 ORTHO05D004559 1.2e-07 63.2 57 56.1
Dinv00152 Davidia involucrata HOM05D026811 ORTHO05D004559 1.5e-07 62.8 56 57.1
Cpa.g.sc18.136 Carica papaya HOM05D004001 ORTHO05D004559 4.9e-06 57.8 46 63.0
Oeu005773.1 Olea europaea HOM05D004001 ORTHO05D004559 4.9e-06 57.8 46 65.2
BcaC07g37285 Brassica carinata HOM05D025803 ORTHO05D027242 8.4e-06 57.0 50 64.0


User provided reference genes

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