Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0208011 Lupinus albus HOM05D005802 ORTHO05D006992 7.8e-40 166.8 90 100.0
Lj3g0015572 Lotus japonicus HOM05D005802 ORTHO05D006992 2.1e-24 115.5 74 86.5
Medtr4g026180 Medicago truncatula HOM05D005802 ORTHO05D006992 4.6e-24 114.4 76 86.8
Phvul.010G077700 Phaseolus vulgaris HOM05D005802 ORTHO05D006992 7.8e-24 113.6 74 83.8
VMungo0331G0187 Vigna mungo HOM05D005802 ORTHO05D006992 1.0e-23 113.2 74 83.8
TPR.G5024 Trifolium pratense HOM05D005802 ORTHO05D006992 1.3e-23 112.8 76 84.2
Cpa.g.sc49.162 Carica papaya HOM05D005802 ORTHO05D006992 3.0e-23 111.7 74 82.4
PGR042G3152 Punica granatum HOM05D005802 ORTHO05D006992 5.1e-23 110.9 74 79.7
Atru.chr5.259 Acer truncatum HOM05D005802 ORTHO05D006992 6.6e-23 110.5 75 84.0
Dinv44124 Davidia involucrata HOM05D005802 ORTHO05D006992 8.6e-23 110.2 74 81.1
Glyma.01G137000 Glycine max HOM05D005802 ORTHO05D006992 8.6e-23 110.2 74 81.1
Sc02g0002770 Simmondsia chinensis HOM05D005802 ORTHO05D006992 1.5e-22 109.4 72 81.9
arahy.Tifrunner.gnm1.ann1.GQKS8P Arachis hypogaea HOM05D005802 ORTHO05D006992 2.5e-22 108.6 76 80.3
arahy.Tifrunner.gnm1.ann1.I9SF1K Arachis hypogaea HOM05D005802 ORTHO05D006992 2.5e-22 108.6 76 80.3
Ciclev10021687m.g Citrus clementina HOM05D005802 ORTHO05D006992 2.5e-22 108.6 74 78.4
GSVIVG01027639001 Vitis vinifera HOM05D005802 ORTHO05D006992 2.5e-22 108.6 74 78.4
TWI23G1076 Tripterygium wilfordii HOM05D005802 ORTHO05D006992 3.3e-22 108.2 74 78.4
COL.COLO4_12497 Corchorus olitorius HOM05D005802 ORTHO05D006992 4.3e-22 107.8 74 77.0
Duzib133G1160 Durio zibethinus HOM05D005802 ORTHO05D006992 4.3e-22 107.8 74 78.4
Manes.05G048500 Manihot esculenta HOM05D005802 ORTHO05D006992 4.3e-22 107.8 74 81.1
AT3G60660 Arabidopsis thaliana HOM05D005802 ORTHO05D006992 5.6e-22 107.5 74 77.0
BcaC07g40584 Brassica carinata HOM05D005802 ORTHO05D006992 5.6e-22 107.5 74 77.0
AL5G42970 Arabidopsis lyrata HOM05D005802 ORTHO05D006992 7.3e-22 107.1 74 77.0
C08p35600 Brassica napus HOM05D005802 ORTHO05D006992 7.3e-22 107.1 74 75.7
BolC8t51149H Brassica oleracea HOM05D005802 ORTHO05D006992 7.3e-22 107.1 74 75.7
BraA09t40717Z Brassica rapa HOM05D005802 ORTHO05D006992 7.3e-22 107.1 74 75.7
Potri.014G060000 Populus trichocarpa HOM05D005802 ORTHO05D006992 7.3e-22 107.1 74 79.7
Rhsim01G0150000 Rhododendron simsii HOM05D005802 ORTHO05D006992 7.3e-22 107.1 74 79.7
Sabra14G0043900 Salix brachista HOM05D005802 ORTHO05D006992 7.3e-22 107.1 74 79.7
Aa31LG10G14950 Aethionema arabicum HOM05D005802 ORTHO05D006992 9.5e-22 106.7 74 78.4
CARHR171060 Cardamine hirsuta HOM05D005802 ORTHO05D006992 1.2e-21 106.3 74 77.0
Gohir.D12G097200 Gossypium hirsutum HOM05D005802 ORTHO05D006992 1.2e-21 106.3 74 77.0
Gorai.008G105800 Gossypium raimondii HOM05D005802 ORTHO05D006992 1.2e-21 106.3 74 77.0
THA.LOC104802463 Tarenaya hassleriana HOM05D005802 ORTHO05D006992 1.2e-21 106.3 74 77.0
Thecc.01G381900 Theobroma cacao HOM05D005802 ORTHO05D006992 1.2e-21 106.3 69 81.2
Nn6g34003 Nelumbo nucifera HOM05D005802 ORTHO05D006992 1.6e-21 105.9 74 78.4
A09p52850 Brassica napus HOM05D005802 ORTHO05D006992 2.1e-21 105.5 74 74.3
Lj7A534G38 Lonicera japonica HOM05D000908 ORTHO05D000789 2.8e-21 105.1 74 77.0
Gohir.A12G094400 Gossypium hirsutum HOM05D005802 ORTHO05D006992 3.6e-21 104.8 74 75.7
FvH4_7g11150 Fragaria vesca HOM05D005802 ORTHO05D006992 4.7e-21 104.4 74 74.3
FAN10G1300 Fragaria x ananassa HOM05D005802 ORTHO05D006992 6.2e-21 104.0 74 74.3
TAR375G0577 Trochodendron aralioides HOM05D005802 ORTHO05D006992 6.2e-21 104.0 74 77.0
Eucgr.D02489 Eucalyptus grandis HOM05D005802 ORTHO05D006992 1.1e-20 103.2 74 74.3
FAN06G3617 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.1e-20 103.2 74 73.0
Oeu045806.1 Olea europaea HOM05D005802 ORTHO05D006992 1.1e-20 103.2 87 66.7
Thhalv10006164m.g Eutrema salsugineum HOM05D005802 ORTHO05D006992 1.4e-20 102.8 74 74.3
FAN01G2984 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.8e-20 102.4 74 73.0
FAN03G1851 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.8e-20 102.4 74 73.0
FAN06G1875 Fragaria x ananassa HOM05D005802 ORTHO05D006992 2.4e-20 102.1 74 71.6
FAN10G3200 Fragaria x ananassa HOM05D005802 ORTHO05D006992 3.1e-20 101.7 74 73.0
Oeu055514.1 Olea europaea HOM05D005802 ORTHO05D006992 3.1e-20 101.7 74 71.6
ClCG09G008930 Citrullus lanatus HOM05D005802 ORTHO05D006992 4.0e-20 101.3 74 73.0
Carub.0005s2739 Capsella rubella HOM05D005802 ORTHO05D006992 5.2e-20 100.9 74 73.0
MD02G1209900 Malus domestica HOM05D005802 ORTHO05D006992 5.2e-20 100.9 74 73.0
Carub.0005s2750 Capsella rubella HOM05D005802 ORTHO05D006992 6.8e-20 100.5 74 71.6
HanXRQChr03g0088101 Helianthus annuus HOM05D005802 ORTHO05D006992 6.8e-20 100.5 74 71.6
RcHm_v2.0_Chr1g0349201 Rosa chinensis HOM05D005802 ORTHO05D006992 6.8e-20 100.5 74 71.6
RcHm_v2.0_Chr5g0028911 Rosa chinensis HOM05D005802 ORTHO05D006992 6.8e-20 100.5 74 73.0
CAN.G106.25 Capsicum annuum HOM05D005802 ORTHO05D006992 8.9e-20 100.1 74 71.6
AUR62013665 Chenopodium quinoa HOM05D005802 ORTHO05D006992 8.9e-20 100.1 74 70.3
Nitab4.5_0005050g0030 Nicotiana tabacum HOM05D005802 ORTHO05D006992 8.9e-20 100.1 74 70.3
Peaxi162Scf01052g00014 Petunia axillaris HOM05D005802 ORTHO05D006992 8.9e-20 100.1 74 70.3
Actinidia12678 Actinidia chinensis HOM05D005802 ORTHO05D006992 1.2e-19 99.8 69 75.4
Ah.05g173870 Amaranthus hybridus HOM05D005802 ORTHO05D006992 1.5e-19 99.4 74 67.6
CiPaw.13G033000 Carya illinoinensis HOM05D005802 ORTHO05D006992 1.5e-19 99.4 75 70.7
AUR62004168 Chenopodium quinoa HOM05D005802 ORTHO05D006992 1.5e-19 99.4 74 68.9
ECA234G0875 Erigeron canadensis HOM05D005802 ORTHO05D006992 1.5e-19 99.4 72 73.6
Nitab4.5_0001329g0060 Nicotiana tabacum HOM05D005802 ORTHO05D006992 1.5e-19 99.4 74 70.3
Psat7g217800 Pisum sativum HOM05D005802 ORTHO05D006992 1.5e-19 99.4 73 72.6
Sp5g02580 Schrenkiella parvula HOM05D005802 ORTHO05D006992 2.0e-19 99.0 74 70.3
Sed0027573 Sechium edule HOM05D005802 ORTHO05D006992 2.0e-19 99.0 74 70.3
MSTRG.17165 Avicennia marina HOM05D005802 ORTHO05D006992 2.6e-19 98.6 74 68.9
CANSAT56G0664 Cannabis sativa HOM05D005802 ORTHO05D006992 2.6e-19 98.6 74 71.6
MELO3C021033.2 Cucumis melo HOM05D005802 ORTHO05D006992 2.6e-19 98.6 74 71.6
RcHm_v2.0_Chr1g0349241 Rosa chinensis HOM05D005802 ORTHO05D006992 2.6e-19 98.6 74 71.6
SGA_v2.0_scaffold153G36973 Striga asiatica HOM05D005802 ORTHO05D006992 2.6e-19 98.6 74 68.9
Haze_02673 Corylus avellana HOM05D005802 ORTHO05D006992 3.4e-19 98.2 74 68.9
DCAR_025098 Daucus carota HOM05D005802 ORTHO05D006992 3.4e-19 98.2 69 75.4
Lsat_1_v5_gn_4_44621 Lactuca sativa HOM05D005802 ORTHO05D006992 3.4e-19 98.2 74 71.6
Prupe.2G138600 Prunus persica HOM05D005802 ORTHO05D006992 3.4e-19 98.2 74 71.6
Aqoxy7G00743 Aquilegia oxysepala HOM05D005802 ORTHO05D006992 5.8e-19 97.4 74 71.6
PSO017G7043 Papaver somniferum HOM05D005802 ORTHO05D006992 7.6e-19 97.1 74 71.6
SalBow5G5068 Salvia bowleyana HOM05D005802 ORTHO05D006992 7.6e-19 97.1 74 68.9
Solyc05g050900.4 Solanum lycopersicum HOM05D005802 ORTHO05D006992 7.6e-19 97.1 74 66.2
Sopen05g029380 Solanum pennellii HOM05D005802 ORTHO05D006992 7.6e-19 97.1 74 66.2
PGSC0003DMG400007022 Solanum tuberosum HOM05D005802 ORTHO05D006992 7.6e-19 97.1 74 66.2
SHI22577 Sapria himalayana HOM05D005802 ORTHO05D006992 9.9e-19 96.7 74 68.9
Hund27376 Selenicereus undatus HOM05D005802 ORTHO05D006992 9.9e-19 96.7 74 70.3
Migut.B01600 Erythranthe guttata HOM05D005802 ORTHO05D006992 1.7e-18 95.9 74 66.2
CARHR170760 Cardamine hirsuta HOM05D005802 ORTHO05D006992 2.2e-18 95.5 74 68.9
PSO478G1061 Papaver somniferum HOM05D005802 ORTHO05D006992 2.2e-18 95.5 74 70.3
CsaV3_7G026130 Cucumis sativus L. HOM05D005802 ORTHO05D006992 6.4e-18 94.0 74 68.9
CSS0000774 Camellia sinensis var. sinensis HOM05D005802 ORTHO05D006992 1.1e-17 93.2 74 73.0
QL04p039160 Quercus lobata HOM05D005802 ORTHO05D006992 1.1e-17 93.2 70 68.6
Cc02_g24280 Coffea canephora HOM05D005802 ORTHO05D006992 1.2e-16 89.7 73 63.0
Hma1.2p1_0072F.1_g038280 Hydrangea macrophylla HOM05D005802 ORTHO05D006992 3.5e-16 88.2 74 67.6
Oeu051925.1 Olea europaea HOM05D005802 ORTHO05D006992 1.0e-15 86.7 74 67.6
Glyma.03G031532 Glycine max HOM05D005802 ORTHO05D006992 3.9e-15 84.7 85 60.0
vmacro21028 Vaccinium macrocarpon HOM05D005802 ORTHO05D006992 1.1e-14 83.2 66 72.7
Ca_02431_v3 Cicer arietinum L. HOM05D005802 ORTHO05D006992 5.6e-14 80.9 53 83.0
Os07g0484500 Oryza sativa ssp. japonica HOM05D005802 ORTHO05D006992 5.6e-14 80.9 73 54.8
Cfa011175 Carpinus fangiana HOM05D005802 ORTHO05D006992 2.8e-13 78.6 64 62.5
ATR1153G072 Amborella trichopoda HOM05D005802 ORTHO05D006992 4.0e-12 74.7 69 55.1
Zm00001eb321530 Zea mays HOM05D005802 ORTHO05D006992 9.9e-11 70.1 73 47.9
CDE04G3422 Ceratophyllum demersum HOM05D005802 ORTHO05D006992 1.1e-09 66.6 60 65.0
EL10Ac1g00841 Beta vulgaris HOM05D005802 ORTHO05D006992 7.1e-09 63.9 68 51.5
RcHm_v2.0_Chr1g0349161 Rosa chinensis HOM05D005802 ORTHO05D006992 7.3e-06 53.9 37 73.0


User provided reference genes

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