Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 1.4e-63 246.1 125 100.0
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 3.6e-51 204.9 125 82.4
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 3.3e-49 198.4 126 80.2
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 7.0e-47 190.7 120 78.3
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 1.2e-46 189.9 118 78.8
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 2.0e-46 189.1 121 76.0
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 2.7e-46 188.7 121 76.0
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 1.7e-45 186.0 121 74.4
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 3.8e-45 184.9 125 70.4
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 3.8e-45 184.9 125 71.2
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 8.5e-45 183.7 117 76.9
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 1.5e-44 183.0 125 69.6
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 3.2e-44 181.8 122 73.8
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 7.2e-44 180.6 123 71.5
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.6e-43 179.5 123 73.2
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 4.7e-43 177.9 123 70.7
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 8.0e-43 177.2 122 69.7
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 5.2e-42 174.5 120 70.8
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 6.8e-42 174.1 123 68.3
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 8.8e-42 173.7 123 71.5
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 8.8e-42 173.7 123 68.3
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 2.0e-41 172.6 121 69.4
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 2.0e-41 172.6 123 67.5
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 2.0e-41 172.6 123 68.3
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 3.4e-41 171.8 123 68.3
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 4.4e-41 171.4 120 70.0
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 4.4e-41 171.4 121 70.2
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 5.7e-41 171.0 123 67.5
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 7.5e-41 170.6 121 69.4
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 1.3e-40 169.9 125 68.8
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.3e-40 169.9 123 67.5
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 1.3e-40 169.9 121 68.6
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.7e-40 169.5 120 69.2
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.2e-40 169.1 120 68.3
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 2.2e-40 169.1 120 68.3
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 2.2e-40 169.1 123 67.5
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 2.2e-40 169.1 123 69.1
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 2.2e-40 169.1 123 66.7
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 2.8e-40 168.7 123 69.1
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 2.8e-40 168.7 123 67.5
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 4.8e-40 167.9 119 66.4
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 4.8e-40 167.9 119 66.4
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 4.8e-40 167.9 119 66.4
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 6.3e-40 167.5 125 67.2
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 6.3e-40 167.5 123 66.7
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 8.3e-40 167.2 123 65.0
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.1e-39 166.8 123 65.9
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 1.4e-39 166.4 119 68.1
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 1.8e-39 166.0 120 69.2
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 1.8e-39 166.0 119 65.5
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 2.4e-39 165.6 123 64.2
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 2.4e-39 165.6 123 65.9
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 3.1e-39 165.2 120 67.5
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 3.1e-39 165.2 118 69.5
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 3.1e-39 165.2 123 65.9
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 5.4e-39 164.5 122 65.6
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 5.4e-39 164.5 120 67.5
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 7.0e-39 164.1 119 65.5
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 9.1e-39 163.7 119 64.7
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 1.6e-38 162.9 119 63.9
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 2.0e-38 162.5 119 63.9
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 2.7e-38 162.2 118 69.5
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 7.7e-38 160.6 125 61.6
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 7.7e-38 160.6 118 68.6
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 1.0e-37 160.2 119 63.9
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 1.0e-37 160.2 125 60.8
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 1.0e-37 160.2 154 55.2
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 2.3e-37 159.1 121 66.9
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 2.9e-37 158.7 119 61.3
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 2.9e-37 158.7 118 64.4
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 5.0e-37 157.9 121 65.3
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 8.6e-37 157.1 121 63.6
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 1.1e-36 156.8 119 62.2
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.5e-36 156.4 112 66.1
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 3.3e-36 155.2 121 61.2
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 3.3e-36 155.2 120 63.3
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 4.2e-36 154.8 121 62.0
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.1e-35 152.5 119 60.5
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 2.8e-35 152.1 120 60.0
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.8e-35 152.1 119 60.5
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 3.6e-35 151.8 101 69.3
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.4e-34 149.8 121 60.3
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.4e-34 149.8 121 60.3
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 1.2e-33 146.7 119 62.2
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 1.5e-33 146.4 137 53.3
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 5.7e-33 144.4 107 60.7
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 5.7e-33 144.4 96 75.0
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 8.3e-32 140.6 119 58.8
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 1.8e-31 139.4 123 51.2
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 2.4e-31 139.0 108 58.3
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 2.0e-30 136.0 91 70.3
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.5e-30 134.8 108 60.2
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 1.0e-29 133.7 89 70.8
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.3e-29 133.3 108 57.4
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 2.3e-29 132.5 174 43.1
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.9e-28 129.4 88 70.5
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 4.7e-27 124.8 85 67.1
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.4e-26 123.2 91 64.8
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 1.8e-26 122.9 96 65.6
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.0e-26 122.1 91 64.8
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 4.0e-26 121.7 99 56.6
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 4.0e-26 121.7 92 64.1
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 2.6e-25 119.0 113 46.0
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 3.4e-25 118.6 121 45.5
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 4.4e-25 118.2 91 65.9
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 8.3e-24 114.0 125 48.0
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.2e-22 110.2 104 50.0
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 2.7e-22 109.0 88 59.1
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 6.0e-22 107.8 85 57.6
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 6.0e-22 107.8 102 51.0
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 3.9e-21 105.1 54 92.6
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.2e-17 93.6 116 44.0
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 4.6e-06 55.1 119 33.6


User provided reference genes

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