Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 0.0e+00 1198.3 591 100.0
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 0.0e+00 1127.1 591 93.1
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 7.6e-285 983.4 597 81.9
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 9.3e-283 976.5 596 81.5
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 2.3e-281 971.8 598 80.1
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 7.3e-280 966.8 596 80.7
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 2.1e-279 965.3 598 79.6
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 6.2e-279 963.8 593 80.3
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 8.1e-279 963.4 572 82.2
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.4e-278 962.6 572 81.1
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 1.4e-278 962.6 572 81.1
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 1.4e-278 962.6 596 79.2
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 2.4e-278 961.8 572 82.0
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 5.3e-278 960.7 572 81.1
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 1.2e-277 959.5 595 79.8
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 7.6e-277 956.8 602 79.9
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 9.9e-277 956.4 600 78.3
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.7e-276 955.7 600 79.0
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 8.4e-276 953.4 589 80.3
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 8.4e-276 953.4 599 78.5
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 3.2e-275 951.4 599 79.6
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 3.2e-275 951.4 599 79.3
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 2.7e-274 948.3 592 79.6
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 3.5e-274 948.0 595 77.6
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 3.9e-273 944.5 595 78.2
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 1.1e-272 943.0 599 78.3
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 9.6e-272 939.9 573 79.4
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 1.3e-271 939.5 571 80.7
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.8e-271 938.3 571 79.3
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 2.4e-270 935.3 602 76.9
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 2.4e-270 935.3 591 77.7
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 9.0e-270 933.3 585 78.5
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 1.2e-269 932.9 594 77.3
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 2.6e-269 931.8 578 78.7
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 1.0e-268 929.9 591 77.7
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 1.3e-268 929.5 614 77.0
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 1.3e-268 929.5 603 76.0
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 2.2e-268 928.7 577 77.8
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 2.9e-268 928.3 571 77.4
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 1.1e-267 926.4 572 78.7
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 1.9e-267 925.6 585 75.9
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 4.2e-267 924.5 588 77.7
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 2.7e-266 921.8 576 76.7
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 4.6e-266 921.0 597 75.9
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 6.0e-266 920.6 600 75.0
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 7.9e-266 920.2 577 79.4
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 7.9e-266 920.2 603 75.0
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 3.9e-265 917.9 582 78.2
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 1.9e-264 915.6 598 75.6
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 7.4e-264 913.7 603 75.0
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 9.6e-264 913.3 601 74.9
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 2.8e-263 911.8 619 74.0
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 3.7e-263 911.4 600 74.7
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 4.8e-263 911.0 619 73.8
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 4.8e-263 911.0 595 73.6
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 1.1e-262 909.8 599 74.1
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 1.4e-262 909.4 566 76.1
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.4e-262 909.4 615 72.7
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 1.4e-262 909.4 595 73.6
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 1.4e-262 909.4 571 78.5
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 2.4e-262 908.7 579 76.7
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 3.1e-262 908.3 601 74.4
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 3.1e-262 908.3 619 73.7
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 4.0e-262 907.9 620 73.9
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 9.0e-262 906.7 602 74.1
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 2.0e-261 905.6 596 74.8
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 2.0e-261 905.6 615 72.5
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 3.4e-261 904.8 572 78.0
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 5.8e-261 904.0 598 73.9
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 1.0e-260 903.3 603 74.0
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 1.0e-260 903.3 573 77.7
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 1.7e-260 902.5 602 72.8
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 2.9e-260 901.7 604 73.5
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 3.8e-260 901.4 592 75.3
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 8.4e-260 900.2 573 76.4
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 5.5e-259 897.5 574 75.4
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 1.6e-258 896.0 596 74.3
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 2.1e-258 895.6 603 72.1
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 2.7e-258 895.2 576 74.7
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 2.7e-258 895.2 603 73.5
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.0e-257 893.3 598 72.7
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 1.0e-257 893.3 594 73.4
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 1.0e-257 893.3 598 73.9
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 1.3e-257 892.9 600 73.8
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 3.0e-257 891.7 571 75.7
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 6.7e-257 890.6 599 72.5
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 1.9e-256 889.0 586 74.4
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 3.3e-256 888.3 573 73.8
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 3.3e-256 888.3 598 72.4
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 3.3e-256 888.3 599 72.0
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 4.3e-256 887.9 596 73.3
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 5.7e-256 887.5 600 72.2
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 9.7e-256 886.7 582 74.7
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 2.2e-255 885.6 602 73.1
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 2.2e-255 885.6 579 75.1
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 3.7e-255 884.8 594 72.6
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 1.1e-254 883.2 600 72.5
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 1.8e-254 882.5 575 75.0
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 2.4e-254 882.1 596 72.3
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 4.1e-254 881.3 547 79.2
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 6.9e-254 880.6 592 73.3
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 1.2e-253 879.8 598 71.6
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 2.0e-253 879.0 571 73.9
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 3.4e-253 878.2 702 65.0
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 3.8e-252 874.8 560 77.3
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 8.5e-252 873.6 571 72.9
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 1.1e-251 873.2 571 72.7
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 1.4e-251 872.8 571 72.7
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 2.5e-251 872.1 571 73.0
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 3.2e-251 871.7 571 73.0
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 9.4e-251 870.2 573 72.6
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 7.9e-250 867.1 571 72.7
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 7.9e-250 867.1 537 78.0
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 1.4e-249 866.3 571 72.3
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 4.1e-246 854.7 574 74.4
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 8.5e-244 847.0 607 71.3
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 1.6e-242 842.8 527 79.1
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 2.6e-240 835.5 606 69.6
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 1.3e-239 833.2 595 70.4
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.0e-236 823.5 520 76.9
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 2.6e-232 808.9 496 80.4
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 1.4e-230 803.1 558 68.8
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 1.3e-228 796.6 583 66.6
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.6e-226 788.5 890 50.2
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 1.0e-225 786.9 936 49.0
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 1.5e-208 729.9 592 63.7
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.5e-208 729.9 571 64.6
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 7.5e-208 727.6 587 62.5
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 1.1e-203 713.8 537 67.6
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 1.9e-195 686.4 402 83.1
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 1.9e-190 669.8 567 57.3
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 1.4e-182 643.7 450 69.8
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 2.4e-174 616.3 341 88.0
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 6.6e-164 581.6 435 69.9
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 1.8e-153 547.0 420 68.6
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 1.2e-149 534.3 567 48.5
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 2.0e-144 516.9 308 83.1
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 2.0e-131 473.8 445 60.2
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 2.0e-115 420.6 347 57.9
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 1.4e-100 371.3 387 47.0
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 2.8e-98 363.6 662 35.5
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 2.8e-93 347.1 514 37.5
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 1.4e-89 334.7 188 87.8
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 4.1e-81 306.6 239 63.6
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 8.6e-79 298.9 230 63.5
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 5.8e-75 286.2 219 67.1
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 1.7e-74 284.6 589 32.9
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 8.9e-68 262.3 240 56.7
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 8.9e-68 262.3 240 56.7
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 4.3e-62 243.4 200 61.0
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 3.6e-61 240.4 367 35.4
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 1.8e-60 238.0 161 70.2
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 9.9e-51 205.7 236 51.7
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 4.8e-45 186.8 110 82.7
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 7.1e-33 146.4 118 60.2
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 2.8e-29 134.4 72 90.3
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 2.5e-25 121.3 161 45.3
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 2.5e-25 121.3 161 45.3
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 2.9e-18 97.8 105 51.4
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 6.7e-15 86.7 42 90.5
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 1.4e-12 79.0 49 63.3
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 1.4e-12 79.0 49 63.3
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 9.1e-12 76.3 48 64.6
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 1.0e-10 72.8 43 67.4
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 2.2e-10 71.6 75 56.0


User provided reference genes

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