Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0202181 Lupinus albus HOM05D004927 ORTHO05D005798 3.7e-71 271.6 147 100.0
Lalb_Chr13g0297281 Lupinus albus HOM05D004927 ORTHO05D005798 1.6e-58 229.6 141 85.8
Glyma.05G047500 Glycine max HOM05D004927 ORTHO05D005798 2.0e-45 186.0 151 70.9
Phvul.003G210400 Phaseolus vulgaris HOM05D004927 ORTHO05D005798 2.9e-44 182.2 151 69.5
Glyma.17G129300 Glycine max HOM05D004927 ORTHO05D005798 1.0e-41 173.7 138 71.7
Prupe.5G152100 Prunus persica HOM05D004927 ORTHO05D005798 1.1e-40 170.2 159 64.2
Lj4g0014142 Lotus japonicus HOM05D004927 ORTHO05D005798 7.4e-40 167.5 149 65.1
Ciclev10022591m.g Citrus clementina HOM05D004927 ORTHO05D005798 9.7e-40 167.2 155 61.3
CiPaw.12G042500 Carya illinoinensis HOM05D004927 ORTHO05D005798 2.2e-39 166.0 157 63.1
TWI23G0043 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 6.3e-39 164.5 149 61.1
Sp2g26540 Schrenkiella parvula HOM05D004927 ORTHO05D005798 4.1e-38 161.8 150 63.3
AL8G40520 Arabidopsis lyrata HOM05D004927 ORTHO05D005798 7.0e-38 161.0 153 62.1
CiPaw.11G008400 Carya illinoinensis HOM05D004927 ORTHO05D005798 1.6e-37 159.8 151 60.9
VMungo1215G0874 Vigna mungo HOM05D004927 ORTHO05D005798 1.6e-37 159.8 130 71.5
Aa31LG1G18580 Aethionema arabicum HOM05D004927 ORTHO05D005798 2.6e-37 159.1 155 61.3
CANSAT80G0771 Cannabis sativa HOM05D004927 ORTHO05D005798 4.5e-37 158.3 150 62.0
AT5G63460 Arabidopsis thaliana HOM05D004927 ORTHO05D005798 2.2e-36 156.0 153 60.8
Carub.0008s2416 Capsella rubella HOM05D004927 ORTHO05D005798 2.2e-36 156.0 153 60.1
CARHR277310 Cardamine hirsuta HOM05D004927 ORTHO05D005798 2.2e-36 156.0 153 60.8
Medtr4g103580 Medicago truncatula HOM05D004927 ORTHO05D005798 2.9e-36 155.6 150 62.0
Thhalv10005047m.g Eutrema salsugineum HOM05D004927 ORTHO05D005798 5.0e-36 154.8 153 60.8
Duzib068G0304 Durio zibethinus HOM05D004927 ORTHO05D005798 6.5e-36 154.5 148 60.1
Psat0s2546g0040 Pisum sativum HOM05D004927 ORTHO05D005798 1.5e-35 153.3 147 61.2
Dinv11165 Davidia involucrata HOM05D004927 ORTHO05D005798 4.2e-35 151.8 158 57.6
Potri.015G094600 Populus trichocarpa HOM05D004927 ORTHO05D005798 5.5e-35 151.4 152 59.2
GSVIVG01008533001 Vitis vinifera HOM05D004927 ORTHO05D005798 5.5e-35 151.4 160 58.1
TPR.G19215 Trifolium pratense HOM05D004927 ORTHO05D005798 7.2e-35 151.0 148 59.5
BcaC04g23330 Brassica carinata HOM05D004927 ORTHO05D005798 1.6e-34 149.8 150 60.0
Potri.012G096900 Populus trichocarpa HOM05D004927 ORTHO05D005798 1.6e-34 149.8 149 61.1
PGR083G0131 Punica granatum HOM05D004927 ORTHO05D005798 1.6e-34 149.8 156 55.8
MD06G1142800 Malus domestica HOM05D004927 ORTHO05D005798 2.1e-34 149.4 157 57.3
Dinv23136 Davidia involucrata HOM05D004927 ORTHO05D005798 2.7e-34 149.1 154 59.1
Actinidia25582 Actinidia chinensis HOM05D004927 ORTHO05D005798 4.7e-34 148.3 151 58.3
Gohir.D11G039650 Gossypium hirsutum HOM05D004927 ORTHO05D005798 4.7e-34 148.3 151 58.9
Duzib205G1407 Durio zibethinus HOM05D004927 ORTHO05D005798 1.4e-33 146.7 156 56.4
Thecc.03G128000 Theobroma cacao HOM05D004927 ORTHO05D005798 1.4e-33 146.7 154 57.8
Manes.14G051700 Manihot esculenta HOM05D004927 ORTHO05D005798 3.0e-33 145.6 151 56.3
TWI39G0602 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 3.0e-33 145.6 149 57.7
Atru.chr9.1061 Acer truncatum HOM05D004927 ORTHO05D005798 1.5e-32 143.3 153 54.2
arahy.Tifrunner.gnm1.ann1.9DG48R Arachis hypogaea HOM05D004927 ORTHO05D005798 2.0e-32 142.9 136 61.0
arahy.Tifrunner.gnm1.ann1.PKYK26 Arachis hypogaea HOM05D004927 ORTHO05D005798 2.0e-32 142.9 136 61.0
Gohir.A11G036100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 2.6e-32 142.5 151 58.3
CSS0046411 Camellia sinensis var. sinensis HOM05D004927 ORTHO05D005798 4.4e-32 141.7 152 56.6
Gorai.007G042600 Gossypium raimondii HOM05D004927 ORTHO05D005798 4.4e-32 141.7 155 56.8
THA.LOC104818187 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 5.7e-32 141.4 155 56.1
THA.LOC104798947 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 7.5e-32 141.0 155 53.5
Actinidia08867 Actinidia chinensis HOM05D004927 ORTHO05D005798 3.7e-31 138.7 150 56.0
Oeu056013.1 Olea europaea HOM05D004927 ORTHO05D005798 4.8e-31 138.3 158 55.1
MD14G1158000 Malus domestica HOM05D004927 ORTHO05D005798 1.1e-30 137.1 152 55.9
Manes.06G118800 Manihot esculenta HOM05D004927 ORTHO05D005798 1.8e-30 136.3 139 59.0
Sc04g0000700 Simmondsia chinensis HOM05D004927 ORTHO05D005798 2.4e-30 136.0 138 59.4
vmacro19200 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 3.1e-30 135.6 141 57.4
Actinidia33102 Actinidia chinensis HOM05D004927 ORTHO05D005798 5.3e-30 134.8 151 54.3
A09p08260 Brassica napus HOM05D004927 ORTHO05D005798 5.3e-30 134.8 139 59.0
FvH4_5g08180 Fragaria vesca HOM05D004927 ORTHO05D005798 5.3e-30 134.8 154 53.2
BcaB04g19918 Brassica carinata HOM05D004927 ORTHO05D005798 7.0e-30 134.4 139 57.6
Gorai.006G271700 Gossypium raimondii HOM05D004927 ORTHO05D005798 7.0e-30 134.4 148 54.1
MELO3C026211.2 Cucumis melo HOM05D004927 ORTHO05D005798 9.1e-30 134.0 152 55.9
Sed0011812 Sechium edule HOM05D004927 ORTHO05D005798 9.1e-30 134.0 151 55.0
Cc04_g10030 Coffea canephora HOM05D004927 ORTHO05D005798 1.2e-29 133.7 151 53.6
CsaV3_1G000620 Cucumis sativus L. HOM05D004927 ORTHO05D005798 1.6e-29 133.3 152 55.9
MBI07_g34620_MAGBIO Magnolia biondii HOM05D004927 ORTHO05D005798 1.6e-29 133.3 149 56.4
C09p09350 Brassica napus HOM05D000789 ORTHO05D005798 2.0e-29 132.9 139 58.3
BolC9t53847H Brassica oleracea HOM05D000789 ORTHO05D005798 2.0e-29 132.9 139 58.3
Nn3g16487 Nelumbo nucifera HOM05D004927 ORTHO05D005798 2.0e-29 132.9 152 55.3
MSTRG.4598 Avicennia marina HOM05D004927 ORTHO05D005798 3.5e-29 132.1 156 56.4
Sabra12G0070900 Salix brachista HOM05D004927 ORTHO05D005798 4.5e-29 131.7 152 55.9
Solyc03g111270.2 Solanum lycopersicum HOM05D004927 ORTHO05D005798 2.9e-28 129.0 151 49.0
Sopen03g030400 Solanum pennellii HOM05D004927 ORTHO05D005798 2.9e-28 129.0 151 49.0
MSTRG.11279 Avicennia marina HOM05D004927 ORTHO05D005798 3.8e-28 128.6 157 56.1
ECA247G2750 Erigeron canadensis HOM05D004927 ORTHO05D005798 5.0e-28 128.3 151 53.0
Nitab4.5_0003005g0020 Nicotiana tabacum HOM05D004927 ORTHO05D005798 8.5e-28 127.5 155 52.3
PSO063G5502 Papaver somniferum HOM05D004927 ORTHO05D005798 8.5e-28 127.5 159 52.8
RcHm_v2.0_Chr7g0190331 Rosa chinensis HOM05D004927 ORTHO05D005798 1.1e-27 127.1 160 52.5
CDE02G1054 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 1.9e-27 126.3 137 54.7
FAN04G0012 Fragaria x ananassa HOM05D004927 ORTHO05D005798 1.9e-27 126.3 141 56.0
Sabra15G0116000 Salix brachista HOM05D004927 ORTHO05D005798 2.5e-27 125.9 168 50.0
Migut.D01264 Erythranthe guttata HOM05D004927 ORTHO05D005798 5.5e-27 124.8 151 53.0
FAN13G0393 Fragaria x ananassa HOM05D004927 ORTHO05D005798 5.5e-27 124.8 141 55.3
HanXRQChr09g0273101 Helianthus annuus HOM05D004927 ORTHO05D005798 5.5e-27 124.8 149 51.7
BraA09t36477Z Brassica rapa HOM05D004927 ORTHO05D005798 9.4e-27 124.0 152 53.3
Gorai.004G275800 Gossypium raimondii HOM05D004927 ORTHO05D005798 9.4e-27 124.0 148 51.4
FAN18G3853 Fragaria x ananassa HOM05D004927 ORTHO05D005798 1.6e-26 123.2 141 53.9
HPP92_001413 Vanilla planifolia HOM05D004927 ORTHO05D005798 1.6e-26 123.2 144 54.2
HanXRQChr07g0193231 Helianthus annuus HOM05D004927 ORTHO05D005798 1.0e-25 120.6 148 50.7
Gohir.A09G247250 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.4e-25 120.2 137 54.7
Dinv04882 Davidia involucrata HOM05D004927 ORTHO05D005798 1.8e-25 119.8 129 58.9
FAN08G3438 Fragaria x ananassa HOM05D004927 ORTHO05D005798 2.3e-25 119.4 141 53.9
SGA_v2.0_scaffold215G42324 Striga asiatica HOM05D004927 ORTHO05D005798 2.3e-25 119.4 143 51.7
TAR622G0157 Trochodendron aralioides HOM05D004927 ORTHO05D005798 3.0e-25 119.0 150 52.7
EL10As4g23391 Beta vulgaris HOM05D004927 ORTHO05D005798 6.8e-25 117.9 122 58.2
unitig_61.g26197 Utricularia gibba HOM05D004927 ORTHO05D005798 6.8e-25 117.9 160 51.2
QL10p003733 Quercus lobata HOM05D004927 ORTHO05D005798 1.2e-24 117.1 127 55.9
DCAR_026226 Daucus carota HOM05D004927 ORTHO05D005798 1.5e-24 116.7 140 53.6
Lsat_1_v5_gn_1_29040 Lactuca sativa HOM05D004927 ORTHO05D005798 1.5e-24 116.7 154 48.7
Rhsim08G0189300 Rhododendron simsii HOM05D004927 ORTHO05D005798 2.6e-24 115.9 165 47.3
Oeu018539.1 Olea europaea HOM05D004927 ORTHO05D005798 9.8e-24 114.0 157 50.3
Lsat_1_v5_gn_4_80380 Lactuca sativa HOM05D004927 ORTHO05D005798 1.7e-23 113.2 147 51.7
Aqoxy3G01521 Aquilegia oxysepala HOM05D004927 ORTHO05D005798 2.2e-23 112.8 155 50.3
SalBow1G5982 Salvia bowleyana HOM05D004927 ORTHO05D005798 2.2e-23 112.8 135 54.8
PSO782G2667 Papaver somniferum HOM05D004927 ORTHO05D005798 6.3e-23 111.3 151 50.3
Gohir.D08G258600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 9.1e-22 107.5 137 51.8
Haze_07225 Corylus avellana HOM05D004927 ORTHO05D005798 1.3e-20 103.6 108 56.5
Os11g0483600 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 1.3e-20 103.6 167 42.5
PSO017G7268 Papaver somniferum HOM05D004927 ORTHO05D005798 2.9e-20 102.4 157 45.2
PSO478G0696 Papaver somniferum HOM05D004927 ORTHO05D005798 3.8e-20 102.1 157 45.2
BolC2t12346H Brassica oleracea HOM05D001512 ORTHO05D001574 6.6e-20 101.3 105 61.0
Os12g0442900 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 6.6e-20 101.3 154 44.2
SGA_v2.0_scaffold161G37795 Striga asiatica HOM05D004927 ORTHO05D005798 6.6e-20 101.3 192 41.1
Eucgr.B00112 Eucalyptus grandis HOM05D004927 ORTHO05D005798 1.1e-19 100.5 111 54.1
C02p62750 Brassica napus HOM05D001512 ORTHO05D001574 3.3e-19 99.0 105 60.0
SalBow1G7483 Salvia bowleyana HOM05D004927 ORTHO05D005798 4.2e-19 98.6 165 44.8
vmacro16676 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 1.2e-18 97.1 112 53.6
Zm00001eb169640 Zea mays HOM05D004927 ORTHO05D005798 1.2e-18 97.1 156 44.9
AagrBONN_evm.TU.Sc2ySwM_344.432 Anthoceros agrestis HOM05D004927 ORTHO05D005798 3.0e-17 92.4 143 42.7
BcaC03g18207 Brassica carinata HOM05D004927 ORTHO05D005798 4.0e-17 92.0 141 48.2
Nitab4.5_0016919g0010 Nicotiana tabacum HOM05D004927 ORTHO05D005798 1.2e-16 90.5 115 49.6
Pp3c8_10310 Physcomitrium patens HOM05D004927 ORTHO05D005798 1.2e-16 90.5 154 42.9
CDE05G1557 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 1.5e-16 90.1 114 50.9
ClCG06G017840 Citrullus lanatus HOM05D004927 ORTHO05D005798 2.0e-16 89.7 95 61.1
Lj9A478G96 Lonicera japonica HOM05D004927 ORTHO05D005798 3.7e-15 85.5 148 43.9
PGSC0003DMG400015243 Solanum tuberosum HOM05D004927 ORTHO05D005798 4.9e-15 85.1 156 39.1
COL.COLO4_28098 Corchorus olitorius HOM05D004927 ORTHO05D005798 1.6e-13 80.1 82 53.7
ATR0561G036 Amborella trichopoda HOM05D004927 ORTHO05D005798 5.9e-13 78.2 117 46.2
Gohir.A09G246700 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.7e-12 76.6 72 58.3
CBR_g36334 Chara braunii HOM05D004927 ORTHO05D005798 3.8e-12 75.5 173 38.7
SMO334G0034 Selaginella moellendorffii HOM05D004927 ORTHO05D005798 1.1e-11 73.9 145 35.9
CBR_g27958 Chara braunii HOM05D004927 ORTHO05D005798 1.5e-11 73.6 164 38.4
Migut.I00501 Erythranthe guttata HOM05D004927 ORTHO05D005798 2.1e-10 69.7 116 46.6
HPP92_001420 Vanilla planifolia HOM05D004927 ORTHO05D005798 3.6e-10 68.9 67 58.2
BraA02t09201Z Brassica rapa HOM05D004927 ORTHO05D005798 4.7e-10 68.6 84 57.1
CAN.G352.25 Capsicum annuum HOM05D004927 ORTHO05D005798 4.7e-10 68.6 85 49.4
Cfa018832 Carpinus fangiana HOM05D004927 ORTHO05D005798 8.0e-10 67.8 66 57.6
Mapoly0121s0035 Marchantia polymorpha HOM05D004927 ORTHO05D005798 1.2e-08 63.9 100 42.0
Gohir.D09G247201 Gossypium hirsutum HOM05D004927 ORTHO05D005798 2.0e-08 63.2 64 53.1
Cpa.g.sc13.128 Carica papaya HOM05D004927 ORTHO05D005798 4.4e-08 62.0 59 57.6
Gohir.D01G081600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 3.7e-07 58.9 52 61.5
Gohir.D07G062100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 3.7e-07 58.9 52 61.5
Gorai.007G057300 Gossypium raimondii HOM05D004927 ORTHO05D005798 3.7e-07 58.9 52 61.5
Hma1.2p1_2767F.1_g328170 Hydrangea macrophylla HOM05D004927 ORTHO05D005798 6.4e-07 58.2 79 48.1
Gohir.D09G248000 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.1e-06 57.4 84 44.0
Lsat_1_v5_gn_5_95420 Lactuca sativa HOM05D004927 ORTHO05D005798 1.9e-06 56.6 83 44.6


User provided reference genes

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