Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0202161 Lupinus albus HOM05D000135 ORTHO05D000816 2.7e-23 112.5 141 100.0
Lalb_Chr08g0237071 Lupinus albus HOM05D000135 ORTHO05D000816 7.4e-13 77.8 141 83.7
Prupe.5G152700 Prunus persica HOM05D000135 ORTHO05D000816 7.4e-13 77.8 141 37.6
Glyma.04G136600 Glycine max HOM05D000135 ORTHO05D000816 2.8e-12 75.9 142 40.8
Lalb_Chr11g0069631 Lupinus albus HOM05D000135 ORTHO05D000816 6.3e-12 74.7 141 84.4
TPR.G30002 Trifolium pratense HOM05D000135 ORTHO05D000816 6.3e-12 74.7 136 80.1
Psat0s3961g0080 Pisum sativum HOM05D000135 ORTHO05D000816 1.1e-11 73.9 137 72.3
Lj4g0011466 Lotus japonicus HOM05D000135 ORTHO05D000816 1.4e-11 73.6 44 81.8
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 2.4e-11 72.8 141 34.8
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.4e-11 72.8 141 34.8
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.4e-11 72.8 141 34.8
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.1e-11 72.4 141 34.8
Lj4g0025643 Lotus japonicus HOM05D000135 ORTHO05D000816 4.1e-11 72.0 44 79.5
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.3e-11 71.6 141 34.8
Glyma.17G128900 Glycine max HOM05D000135 ORTHO05D000816 7.0e-11 71.2 141 83.0
Lj1g0021536 Lotus japonicus HOM05D000135 ORTHO05D000816 9.1e-11 70.9 142 35.9
Ca_00913_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 1.6e-10 70.1 44 75.0
Ca_29979_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 1.6e-10 70.1 44 75.0
Glyma.04G136200 Glycine max HOM05D000135 ORTHO05D000816 1.6e-10 70.1 142 35.2
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 1.6e-10 70.1 141 33.3
RcHm_v2.0_Chr7g0190421 Rosa chinensis HOM05D000135 ORTHO05D000816 2.0e-10 69.7 135 34.1
VMungo1215G1953 Vigna mungo HOM05D000135 ORTHO05D000816 2.6e-10 69.3 141 83.7
Sabra16G0213800 Salix brachista HOM05D000135 ORTHO05D000816 5.9e-10 68.2 139 30.9
MELO3C026214.2 Cucumis melo HOM05D000135 ORTHO05D000816 7.7e-10 67.8 138 34.8
Glyma.11G157100 Glycine max HOM05D000135 ORTHO05D000816 7.7e-10 67.8 142 43.0
Glyma.05G047100 Glycine max HOM05D000135 ORTHO05D000816 1.3e-09 67.0 44 70.5
Glyma.11G157200 Glycine max HOM05D000135 ORTHO05D000816 1.3e-09 67.0 142 43.7
Sabra16G0213700 Salix brachista HOM05D000135 ORTHO05D000816 1.3e-09 67.0 139 30.2
CsaV3_1G000650 Cucumis sativus L. HOM05D000135 ORTHO05D000816 2.9e-09 65.9 139 33.8
Psat0s3961g0120 Pisum sativum HOM05D000135 ORTHO05D000816 2.9e-09 65.9 149 38.3
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 5.0e-09 65.1 139 30.2
Glyma.04G136300 Glycine max HOM05D000135 ORTHO05D000816 6.5e-09 64.7 44 70.5
Medtr4g103650 Medicago truncatula HOM05D000135 ORTHO05D000816 8.5e-09 64.3 39 74.4
Psat0s14g0160 Pisum sativum HOM05D000135 ORTHO05D000816 8.5e-09 64.3 141 33.3
Gohir.A03G053400 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.5e-08 63.5 141 63.1
Medtr4g103630 Medicago truncatula HOM05D000135 ORTHO05D000816 1.5e-08 63.5 44 65.9
Phvul.003G210000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 1.5e-08 63.5 141 71.6
ClCG06G017800 Citrullus lanatus HOM05D000135 ORTHO05D000816 1.9e-08 63.2 135 33.3
Psat4g065400 Pisum sativum HOM05D000135 ORTHO05D000816 2.5e-08 62.8 147 38.1
Ca_24507_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 3.2e-08 62.4 142 53.5
Thecc.03G127000 Theobroma cacao HOM05D000135 ORTHO05D000816 4.2e-08 62.0 44 68.2
Medtr4g103655 Medicago truncatula HOM05D000135 ORTHO05D000816 5.5e-08 61.6 44 63.6
Psat5g140800 Pisum sativum HOM05D000135 ORTHO05D000816 5.5e-08 61.6 138 52.9
SalBow1G7946 Salvia bowleyana HOM05D000135 ORTHO05D000816 7.2e-08 61.2 139 46.0
SalBow7G1515 Salvia bowleyana HOM05D000135 ORTHO05D000816 7.2e-08 61.2 139 63.3
Sed0012230 Sechium edule HOM05D000135 ORTHO05D000816 7.2e-08 61.2 40 72.5
Glyma.04G194800 Glycine max HOM05D000135 ORTHO05D000816 9.4e-08 60.8 44 65.9
Medtr3g089070 Medicago truncatula HOM05D000135 ORTHO05D000816 9.4e-08 60.8 44 65.9
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 9.4e-08 60.8 134 30.6
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 9.4e-08 60.8 134 30.6
Atru.chr9.1078 Acer truncatum HOM05D000135 ORTHO05D000816 1.2e-07 60.5 136 30.9
Eucgr.B00125 Eucalyptus grandis HOM05D000135 ORTHO05D000816 1.2e-07 60.5 136 30.1
Manes.17G104400 Manihot esculenta HOM05D000135 ORTHO05D000816 1.2e-07 60.5 137 51.8
Nn4g22363 Nelumbo nucifera HOM05D000135 ORTHO05D000816 1.2e-07 60.5 133 32.3
Nn4g22368 Nelumbo nucifera HOM05D000135 ORTHO05D000816 1.2e-07 60.5 133 33.1
PGSC0003DMG400045603 Solanum tuberosum HOM05D000135 ORTHO05D000816 1.2e-07 60.5 134 30.6
Glyma.06G171150 Glycine max HOM05D000135 ORTHO05D000816 1.6e-07 60.1 141 78.7
Glyma.18G177900 Glycine max HOM05D000135 ORTHO05D000816 1.6e-07 60.1 141 32.6
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 2.1e-07 59.7 134 29.1
Nitab4.5_0002498g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 2.1e-07 59.7 135 31.1
Phvul.005G026000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 2.1e-07 59.7 39 74.4
MD14G1158700 Malus domestica HOM05D000135 ORTHO05D000816 2.7e-07 59.3 38 73.7
Eucgr.B00124 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.6e-07 58.9 136 29.4
Lj3g0020733 Lotus japonicus HOM05D000135 ORTHO05D000816 3.6e-07 58.9 144 38.2
Medtr3g089090 Medicago truncatula HOM05D000135 ORTHO05D000816 3.6e-07 58.9 40 70.0
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 3.6e-07 58.9 136 28.7
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 3.6e-07 58.9 135 29.6
TAR629G1517 Trochodendron aralioides HOM05D000135 ORTHO05D000816 3.6e-07 58.9 139 36.7
SalBow7G4318 Salvia bowleyana HOM05D016915 ORTHO05D000816 4.7e-07 58.5 139 69.1
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 4.7e-07 58.5 134 29.9
Duzib084G0108 Durio zibethinus HOM05D000135 ORTHO05D000816 6.1e-07 58.2 44 63.6
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 6.1e-07 58.2 136 28.7
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 6.1e-07 58.2 134 28.4
PGSC0003DMG400002994 Solanum tuberosum HOM05D000135 ORTHO05D000816 6.1e-07 58.2 134 29.9
Duzib205G1548 Durio zibethinus HOM05D000135 ORTHO05D000816 8.0e-07 57.8 44 61.4
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 8.0e-07 57.8 139 28.1
SalBow1G3513 Salvia bowleyana HOM05D016915 ORTHO05D000816 8.0e-07 57.8 139 68.3
GSVIVG01008516001 Vitis vinifera HOM05D000135 ORTHO05D000816 8.0e-07 57.8 142 38.0
Migut.K01451 Erythranthe guttata HOM05D000135 ORTHO05D000816 1.0e-06 57.4 43 53.5
Eucgr.B00123 Eucalyptus grandis HOM05D000135 ORTHO05D000816 1.0e-06 57.4 136 29.4
Gohir.D10G109651 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.0e-06 57.4 141 29.8
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 1.0e-06 57.4 139 28.1
Phvul.005G026100 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 1.0e-06 57.4 39 71.8
SalBow1G2517 Salvia bowleyana HOM05D016915 ORTHO05D000816 1.0e-06 57.4 139 73.4
SalBow7G4752 Salvia bowleyana HOM05D016915 ORTHO05D000816 1.0e-06 57.4 139 73.4
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 1.4e-06 57.0 135 28.9
Oeu035215.1 Olea europaea HOM05D000135 ORTHO05D000816 1.4e-06 57.0 139 26.6
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 1.8e-06 56.6 139 26.6
MD09G1013600 Malus domestica HOM05D000135 ORTHO05D000816 2.3e-06 56.2 139 27.3
Nitab4.5_0002183g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000816 2.3e-06 56.2 134 29.1
Solyc11g071760.3 Solanum lycopersicum HOM05D000135 ORTHO05D000816 2.3e-06 56.2 134 28.4
SGA_v2.0_scaffold47G17572 Striga asiatica HOM05D000135 ORTHO05D000816 2.3e-06 56.2 44 54.5
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 3.0e-06 55.8 140 27.9
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 3.0e-06 55.8 142 28.2
Sopen11g029420 Solanum pennellii HOM05D000135 ORTHO05D000816 3.0e-06 55.8 134 29.1
SGA_v2.0_scaffold47G17571 Striga asiatica HOM05D000135 ORTHO05D000816 3.0e-06 55.8 141 70.2
CAN.G742.5 Capsicum annuum HOM05D000135 ORTHO05D000816 4.0e-06 55.5 138 27.5
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 4.0e-06 55.5 139 26.6
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 4.0e-06 55.5 139 26.6
TPR.G39344 Trifolium pratense HOM05D000135 ORTHO05D000816 4.0e-06 55.5 139 59.0
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 4.0e-06 55.5 140 29.3
Duzib068G0781 Durio zibethinus HOM05D000135 ORTHO05D000816 5.2e-06 55.1 44 61.4
Potri.005G259900 Populus trichocarpa HOM05D000135 ORTHO05D000816 5.2e-06 55.1 39 59.0
Sabra15G0115400 Salix brachista HOM05D000135 ORTHO05D000816 5.2e-06 55.1 141 74.5
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 6.7e-06 54.7 44 54.5
Gohir.D11G039500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 6.7e-06 54.7 44 61.4
Gorai.007G042400 Gossypium raimondii HOM05D000135 ORTHO05D000816 6.7e-06 54.7 44 61.4
Phvul.004G055200 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 6.7e-06 54.7 139 30.2
Sopen11g029430 Solanum pennellii HOM05D000135 ORTHO05D000816 6.7e-06 54.7 134 27.6
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 6.7e-06 54.7 43 53.5
Migut.K01452 Erythranthe guttata HOM05D016915 ORTHO05D000816 8.8e-06 54.3 44 52.3
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 8.8e-06 54.3 142 28.2
Gohir.A10G155722 Gossypium hirsutum HOM05D000135 ORTHO05D000816 8.8e-06 54.3 141 27.7
Lj2C97T5 Lonicera japonica HOM05D000135 ORTHO05D000816 8.8e-06 54.3 134 42.5
Peaxi162Scf00259g00126 Petunia axillaris HOM05D000135 ORTHO05D000816 8.8e-06 54.3 39 59.0
PGR083G0560 Punica granatum HOM05D000135 ORTHO05D000816 8.8e-06 54.3 136 28.7
QL02p016339 Quercus lobata HOM05D000135 ORTHO05D000816 8.8e-06 54.3 40 60.0


User provided reference genes

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