Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 2.1e-112 409.1 207 100.0
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 1.4e-89 333.2 204 81.4
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 1.0e-87 327.0 203 80.3
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 1.1e-86 323.6 204 79.4
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 4.1e-84 315.1 190 81.6
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 2.6e-83 312.4 204 78.4
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 3.4e-83 312.0 203 79.3
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 2.9e-82 308.9 200 80.5
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 5.5e-81 304.7 207 74.9
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 9.4e-81 303.9 203 77.3
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 9.4e-81 303.9 198 78.3
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 1.6e-80 303.1 203 76.4
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 2.1e-80 302.8 204 77.0
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 2.7e-80 302.4 190 81.6
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 6.1e-80 301.2 198 77.8
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 1.0e-79 300.4 197 77.7
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.8e-79 299.7 197 77.7
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 5.1e-79 298.1 203 74.9
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 5.1e-79 298.1 203 74.9
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 6.7e-79 297.7 197 76.1
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 6.7e-79 297.7 197 76.1
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 8.8e-79 297.4 197 78.2
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.5e-78 296.6 200 74.0
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 2.0e-78 296.2 186 79.0
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 2.0e-78 296.2 203 74.4
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 2.0e-78 296.2 197 76.6
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 2.6e-78 295.8 191 76.4
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 2.6e-78 295.8 194 77.3
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 2.6e-78 295.8 202 73.3
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 5.7e-78 294.7 206 73.8
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.7e-77 293.1 195 74.4
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 2.8e-77 292.4 207 72.0
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 3.7e-77 292.0 203 73.4
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 4.8e-77 291.6 204 73.0
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 4.8e-77 291.6 189 78.8
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 6.3e-77 291.2 199 74.4
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 6.3e-77 291.2 190 79.5
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 8.2e-77 290.8 197 75.6
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 1.1e-76 290.4 195 76.4
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 1.1e-76 290.4 186 78.5
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 1.4e-76 290.0 197 75.6
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 1.4e-76 290.0 203 73.9
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 1.8e-76 289.7 198 73.7
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.1e-76 288.9 203 71.9
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 3.1e-76 288.9 188 77.7
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 4.1e-76 288.5 197 74.1
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 5.3e-76 288.1 192 77.1
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.9e-76 287.7 203 71.9
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.9e-76 287.7 203 71.9
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 9.1e-76 287.3 203 71.9
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 1.5e-75 286.6 204 71.1
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 1.5e-75 286.6 199 74.9
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.5e-75 286.6 197 74.6
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 1.5e-75 286.6 198 73.7
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 2.0e-75 286.2 189 76.7
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 2.6e-75 285.8 204 73.5
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 3.4e-75 285.4 203 71.4
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 7.7e-75 284.3 199 74.4
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 7.7e-75 284.3 186 76.9
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 1.3e-74 283.5 199 73.9
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 1.7e-74 283.1 197 73.6
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 2.9e-74 282.3 197 73.1
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 3.8e-74 282.0 197 72.6
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 3.8e-74 282.0 197 73.1
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 5.0e-74 281.6 197 72.6
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 5.0e-74 281.6 205 70.7
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 6.5e-74 281.2 198 73.2
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 8.5e-74 280.8 206 69.9
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 1.1e-73 280.4 200 71.5
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 1.9e-73 279.6 200 71.5
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 2.5e-73 279.3 204 70.6
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 2.5e-73 279.3 199 71.9
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 2.5e-73 279.3 199 71.9
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 2.5e-73 279.3 199 71.9
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 2.5e-73 279.3 197 71.6
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 2.5e-73 279.3 195 75.9
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 2.5e-73 279.3 193 73.6
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 2.5e-73 279.3 194 71.1
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 1.2e-72 276.9 188 73.4
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.2e-72 276.9 205 68.8
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.6e-72 276.6 202 69.3
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 4.7e-72 275.0 198 71.7
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 6.1e-72 274.6 233 63.9
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 6.1e-72 274.6 190 73.2
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.3e-71 272.7 224 65.2
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 3.0e-71 272.3 190 72.1
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 5.2e-71 271.6 198 69.7
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 8.8e-71 270.8 240 60.4
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 3.3e-70 268.9 198 69.7
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.1e-68 261.9 199 70.9
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 7.0e-68 261.2 227 64.8
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 7.0e-68 261.2 198 67.2
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 2.6e-67 259.2 203 66.0
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 1.3e-66 256.9 188 69.1
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 2.2e-66 256.1 197 66.5
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 3.8e-66 255.4 160 78.8
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 3.2e-65 252.3 181 71.3
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 4.2e-65 251.9 165 77.0
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 2.0e-62 243.0 313 46.6
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 1.0e-58 230.7 133 83.5
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 5.5e-57 224.9 134 79.9
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 1.0e-55 220.7 155 71.6
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 2.3e-55 219.5 200 59.5
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.6e-51 206.8 134 77.6
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 1.8e-47 193.4 134 74.6
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 1.2e-46 190.7 116 82.8
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 3.7e-45 185.7 108 86.1
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 4.9e-45 185.3 118 78.8
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 6.3e-45 184.9 106 84.0
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 6.3e-45 184.9 152 62.5
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.0e-42 177.6 147 63.3
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 1.7e-42 176.8 128 70.3
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 4.0e-39 165.6 92 87.0
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 2.1e-32 143.3 134 56.0
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 4.7e-32 142.1 182 45.6
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 5.2e-31 138.7 176 43.2
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 2.6e-30 136.3 156 50.6
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 1.8e-23 113.6 136 44.1
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 6.8e-23 111.7 183 39.9
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 4.1e-20 102.4 196 36.7
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 7.8e-19 98.2 200 37.0
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 7.8e-11 71.6 71 52.1
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 3.0e-10 69.7 157 31.2


User provided reference genes

Program Settings