Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0200431 Lupinus albus HOM05D005425 ORTHO05D006686 2.0e-50 202.2 110 100.0
Lalb_Chr07g0181511 Lupinus albus HOM05D005425 ORTHO05D006686 1.7e-44 182.6 110 87.3
COL.COLO4_21175 Corchorus olitorius HOM05D005425 ORTHO05D006686 6.4e-44 180.6 110 83.6
Gorai.001G018900 Gossypium raimondii HOM05D005425 ORTHO05D006686 1.1e-43 179.9 110 84.5
Gohir.D07G018300 Gossypium hirsutum HOM05D005425 ORTHO05D006686 1.4e-43 179.5 110 84.5
Gohir.A07G018500 Gossypium hirsutum HOM05D005425 ORTHO05D006686 2.4e-43 178.7 110 83.6
arahy.Tifrunner.gnm1.ann1.I1NZHN Arachis hypogaea HOM05D005425 ORTHO05D006686 1.2e-42 176.4 110 82.7
Lj4g0004112 Lotus japonicus HOM05D005425 ORTHO05D006686 1.2e-42 176.4 110 83.6
Prupe.7G189100 Prunus persica HOM05D005425 ORTHO05D006686 1.2e-42 176.4 108 82.4
Cfa010679 Carpinus fangiana HOM05D005425 ORTHO05D006686 2.0e-42 175.6 108 82.4
Ca_21353_v3 Cicer arietinum L. HOM05D005425 ORTHO05D006686 4.6e-42 174.5 110 82.7
HanXRQChr02g0040411 Helianthus annuus HOM05D005425 ORTHO05D006686 4.6e-42 174.5 110 78.2
arahy.Tifrunner.gnm1.ann1.A16VYK Arachis hypogaea HOM05D005425 ORTHO05D006686 6.0e-42 174.1 110 81.8
Haze_26083 Corylus avellana HOM05D005425 ORTHO05D006686 7.8e-42 173.7 108 81.5
MD15G1225900 Malus domestica HOM05D005425 ORTHO05D006686 7.8e-42 173.7 108 81.5
Thecc.09G067100 Theobroma cacao HOM05D005425 ORTHO05D006686 7.8e-42 173.7 110 80.0
VMungo1215G3244 Vigna mungo HOM05D005425 ORTHO05D006686 1.3e-41 172.9 110 82.7
Duzib150G0231 Durio zibethinus HOM05D005425 ORTHO05D006686 2.3e-41 172.2 110 80.0
MD02G1106000 Malus domestica HOM05D005425 ORTHO05D006686 2.3e-41 172.2 108 79.6
Atru.chr7.1809 Acer truncatum HOM05D005425 ORTHO05D006686 3.0e-41 171.8 108 79.6
Ciclev10009195m.g Citrus clementina HOM05D005425 ORTHO05D006686 3.0e-41 171.8 105 81.9
Eucgr.C00752 Eucalyptus grandis HOM05D005425 ORTHO05D006686 3.0e-41 171.8 108 82.4
Dinv19577 Davidia involucrata HOM05D005425 ORTHO05D006686 3.9e-41 171.4 110 78.2
Duzib168G1380 Durio zibethinus HOM05D005425 ORTHO05D006686 3.9e-41 171.4 110 80.0
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 5.0e-41 171.0 108 81.5
Glyma.17G043500 Glycine max HOM05D005425 ORTHO05D006686 5.0e-41 171.0 110 81.8
Glyma.13G116300 Glycine max HOM05D005425 ORTHO05D006686 8.6e-41 170.2 110 81.8
Medtr4g123593 Medicago truncatula HOM05D005425 ORTHO05D006686 8.6e-41 170.2 110 81.8
Psat4g020320 Pisum sativum HOM05D005425 ORTHO05D006686 8.6e-41 170.2 107 83.2
TWI34G0652 Tripterygium wilfordii HOM05D005425 ORTHO05D006686 1.1e-40 169.9 110 78.2
TWI63G1799 Tripterygium wilfordii HOM05D005425 ORTHO05D006686 1.1e-40 169.9 110 77.3
Nn6g31504 Nelumbo nucifera HOM05D005425 ORTHO05D006686 1.5e-40 169.5 109 78.9
Phvul.003G125400 Phaseolus vulgaris HOM05D005425 ORTHO05D006686 1.5e-40 169.5 109 80.7
CiPaw.03G198700 Carya illinoinensis HOM05D005425 ORTHO05D006686 1.9e-40 169.1 108 79.6
TPR.G12630 Trifolium pratense HOM05D005425 ORTHO05D006686 1.9e-40 169.1 110 80.0
Potri.006G217400 Populus trichocarpa HOM05D005425 ORTHO05D006686 2.5e-40 168.7 110 78.2
Lj4P729T25 Lonicera japonica HOM05D005425 ORTHO05D006686 3.3e-40 168.3 108 76.9
SEGI_31971 Sequoiadendron giganteum HOM05D005425 ORTHO05D006686 3.3e-40 168.3 109 78.9
ECA247G3713 Erigeron canadensis HOM05D005425 ORTHO05D006686 4.3e-40 167.9 108 77.8
CSS0042296 Camellia sinensis var. sinensis HOM05D005425 ORTHO05D006686 7.3e-40 167.2 104 79.8
DCAR_012869 Daucus carota HOM05D005425 ORTHO05D006686 7.3e-40 167.2 110 74.5
GSVIVG01000275001 Vitis vinifera HOM05D005425 ORTHO05D006686 7.3e-40 167.2 108 77.8
PGR044G1074 Punica granatum HOM05D005425 ORTHO05D006686 9.5e-40 166.8 108 79.6
ATR0006G051 Amborella trichopoda HOM05D005425 ORTHO05D006686 1.2e-39 166.4 108 78.7
Aqoxy6G03062 Aquilegia oxysepala HOM05D005425 ORTHO05D006686 1.6e-39 166.0 109 75.2
Zm00001eb068040 Zea mays HOM05D005425 ORTHO05D006686 1.6e-39 166.0 107 80.4
Os04g0653100 Oryza sativa ssp. japonica HOM05D005425 ORTHO05D006686 4.7e-39 164.5 107 76.6
Sabra06G0167600 Salix brachista HOM05D005425 ORTHO05D006686 4.7e-39 164.5 107 78.5
Cc01_g12410 Coffea canephora HOM05D005425 ORTHO05D006686 1.1e-38 163.3 109 74.3
AUR62017596 Chenopodium quinoa HOM05D005425 ORTHO05D006686 1.8e-38 162.5 108 77.8
Manes.03G055300 Manihot esculenta HOM05D005425 ORTHO05D006686 2.3e-38 162.2 110 72.7
vmacro16402 Vaccinium macrocarpon HOM05D005425 ORTHO05D006686 3.1e-38 161.8 108 76.9
Lsat_1_v5_gn_1_2721 Lactuca sativa HOM05D005425 ORTHO05D006686 4.0e-38 161.4 110 71.8
EL10Ac9g22844 Beta vulgaris HOM05D005425 ORTHO05D006686 5.2e-38 161.0 109 75.2
Sc19g0002240 Simmondsia chinensis HOM05D005425 ORTHO05D006686 5.2e-38 161.0 109 76.1
CANSAT56G0436 Cannabis sativa HOM05D005425 ORTHO05D006686 6.8e-38 160.6 105 76.2
CANSAT56G2296 Cannabis sativa HOM05D005425 ORTHO05D006686 6.8e-38 160.6 105 76.2
AUR62015135 Chenopodium quinoa HOM05D005425 ORTHO05D006686 6.8e-38 160.6 108 75.9
Actinidia20626 Actinidia chinensis HOM05D005425 ORTHO05D006686 8.9e-38 160.2 108 75.9
Oeu023197.1 Olea europaea HOM05D005425 ORTHO05D006686 8.9e-38 160.2 109 75.2
MSTRG.1593 Avicennia marina HOM05D005425 ORTHO05D006686 1.5e-37 159.5 108 75.0
Migut.C01372 Erythranthe guttata HOM05D005425 ORTHO05D006686 1.5e-37 159.5 108 74.1
PSO675G8782 Papaver somniferum HOM05D005425 ORTHO05D006686 2.6e-37 158.7 106 74.5
HPP92_002368 Vanilla planifolia HOM05D005425 ORTHO05D006686 5.8e-37 157.5 107 72.0
HPP92_027595 Vanilla planifolia HOM05D005425 ORTHO05D006686 5.8e-37 157.5 107 72.0
TAR383G0806 Trochodendron aralioides HOM05D005425 ORTHO05D006686 9.8e-37 156.8 133 65.4
Hund24245 Selenicereus undatus HOM05D000001 ORTHO05D000003 1.3e-36 156.4 106 74.5
Manes.16G088201 Manihot esculenta HOM05D005425 ORTHO05D006686 3.7e-36 154.8 106 70.8
PSO717G0103 Papaver somniferum HOM05D005425 ORTHO05D006686 3.7e-36 154.8 108 71.3
THA.LOC104810974 Tarenaya hassleriana HOM05D005425 ORTHO05D006686 3.7e-36 154.8 110 71.8
MBI13_g09074_MAGBIO Magnolia biondii HOM05D005425 ORTHO05D006686 1.1e-35 153.3 107 72.0
RcHm_v2.0_Chr2g0096571 Rosa chinensis HOM05D005425 ORTHO05D006686 1.1e-35 153.3 108 72.2
QL11p003539 Quercus lobata HOM05D005425 ORTHO05D006686 1.4e-35 152.9 159 55.3
FvH4_1g09870 Fragaria vesca HOM05D005425 ORTHO05D006686 2.4e-35 152.1 108 71.3
FAN19G0780 Fragaria x ananassa HOM05D005425 ORTHO05D006686 2.4e-35 152.1 108 71.3
THA.LOC104799598 Tarenaya hassleriana HOM05D005425 ORTHO05D006686 2.4e-35 152.1 110 72.7
Ah.01g013630 Amaranthus hybridus HOM05D005425 ORTHO05D006686 3.2e-35 151.8 109 70.6
Nitab4.5_0000610g0160 Nicotiana tabacum HOM05D005425 ORTHO05D006686 3.2e-35 151.8 110 72.7
Solyc11g073240.2 Solanum lycopersicum HOM05D005425 ORTHO05D006686 3.2e-35 151.8 110 71.8
PGSC0003DMG401015541 Solanum tuberosum HOM05D005425 ORTHO05D006686 3.2e-35 151.8 110 73.6
PGSC0003DMG402015541 Solanum tuberosum HOM05D005425 ORTHO05D006686 3.2e-35 151.8 110 73.6
Sed0015214 Sechium edule HOM05D005425 ORTHO05D006686 4.1e-35 151.4 109 71.6
CsaV3_1G041480 Cucumis sativus L. HOM05D005425 ORTHO05D006686 9.2e-35 150.2 109 70.6
Peaxi162Scf00406g00239 Petunia axillaris HOM05D005425 ORTHO05D006686 1.2e-34 149.8 110 71.8
CAN.G764.11 Capsicum annuum HOM05D005425 ORTHO05D006686 1.6e-34 149.4 110 71.8
Aa31LG4G13370 Aethionema arabicum HOM05D005425 ORTHO05D006686 2.1e-34 149.1 110 70.0
AT3G43520 Arabidopsis thaliana HOM05D005425 ORTHO05D006686 2.1e-34 149.1 108 70.4
Carub.0005s0927 Capsella rubella HOM05D005425 ORTHO05D006686 2.1e-34 149.1 108 71.3
Rhsim12G0137300 Rhododendron simsii HOM05D005425 ORTHO05D006686 2.1e-34 149.1 115 69.6
Sopen11g030870 Solanum pennellii HOM05D005425 ORTHO05D006686 2.1e-34 149.1 110 70.9
unitig_578.g16119 Utricularia gibba HOM05D005425 ORTHO05D006686 2.1e-34 149.1 108 69.4
MBI13_g05972_MAGBIO Magnolia biondii HOM05D005425 ORTHO05D006686 7.8e-34 147.1 106 71.7
PGSC0003DMG400015542 Solanum tuberosum HOM05D005425 ORTHO05D006686 7.8e-34 147.1 106 72.6
CARHR098710 Cardamine hirsuta HOM05D005425 ORTHO05D006686 1.0e-33 146.7 109 69.7
AL5G21490 Arabidopsis lyrata HOM05D005425 ORTHO05D006686 1.3e-33 146.4 108 70.4
BcaC01g02214 Brassica carinata HOM05D005425 ORTHO05D006686 5.0e-33 144.4 110 69.1
A06p26640 Brassica napus HOM05D005425 ORTHO05D006686 5.0e-33 144.4 110 69.1
C03p67740 Brassica napus HOM05D005425 ORTHO05D006686 5.0e-33 144.4 110 69.1
BolSC21t60236H Brassica oleracea HOM05D005425 ORTHO05D006686 5.0e-33 144.4 110 69.1
BraA06t25598Z Brassica rapa HOM05D005425 ORTHO05D006686 5.0e-33 144.4 110 69.1
HPP92_010993 Vanilla planifolia HOM05D005425 ORTHO05D006686 5.0e-33 144.4 107 67.3
BcaB02g10778 Brassica carinata HOM05D005425 ORTHO05D006686 8.6e-33 143.7 108 68.5
Sp5g17760 Schrenkiella parvula HOM05D005425 ORTHO05D006686 8.6e-33 143.7 108 70.4
CDE11G0474 Ceratophyllum demersum HOM05D005425 ORTHO05D006686 1.1e-32 143.3 102 72.5
Pp3c23_11420 Physcomitrium patens HOM05D005425 ORTHO05D006686 1.5e-32 142.9 107 66.4
THA.LOC104804448 Tarenaya hassleriana HOM05D005425 ORTHO05D006686 2.5e-32 142.1 110 68.2
Ah.04g151490 Amaranthus hybridus HOM05D005425 ORTHO05D006686 9.5e-32 140.2 110 67.3
AUR62026084 Chenopodium quinoa HOM05D005425 ORTHO05D006686 9.5e-32 140.2 110 68.2
Pp3c23_5560 Physcomitrium patens HOM05D005425 ORTHO05D006686 1.6e-31 139.4 104 66.3
SMO347G0418 Selaginella moellendorffii HOM05D005425 ORTHO05D006686 2.8e-31 138.7 109 67.9
AUR62024499 Chenopodium quinoa HOM05D005425 ORTHO05D006686 1.4e-30 136.3 107 67.3
EL10Ac3g07129 Beta vulgaris HOM05D005425 ORTHO05D006686 8.9e-30 133.7 110 63.6
FAN23G2130 Fragaria x ananassa HOM05D005425 ORTHO05D006686 8.9e-30 133.7 96 70.8
FAN28G1834 Fragaria x ananassa HOM05D005425 ORTHO05D006686 8.9e-30 133.7 96 70.8
Sc13g0001610 Simmondsia chinensis HOM05D005425 ORTHO05D006686 2.0e-29 132.5 107 62.6
SGA_v2.0_scaffold118G32605 Striga asiatica HOM05D005425 ORTHO05D006686 3.4e-29 131.7 108 65.7
SEGI_36327 Sequoiadendron giganteum HOM05D005425 ORTHO05D006686 5.8e-29 131.0 102 65.7
CDE05G1879 Ceratophyllum demersum HOM05D005425 ORTHO05D006686 9.9e-29 130.2 97 69.1
CARHR115050 Cardamine hirsuta HOM05D005425 ORTHO05D006686 1.7e-28 129.4 107 65.4
AT2G26240 Arabidopsis thaliana HOM05D005425 ORTHO05D006686 2.9e-28 128.6 107 63.6
Carub.0004s0606 Capsella rubella HOM05D005425 ORTHO05D006686 2.9e-28 128.6 104 65.4
Sp4g06390 Schrenkiella parvula HOM05D005425 ORTHO05D006686 3.7e-28 128.3 107 65.4
BcaC07g40833 Brassica carinata HOM05D005425 ORTHO05D006686 4.9e-28 127.9 107 64.5
A09p55370 Brassica napus HOM05D000181 ORTHO05D004115 4.9e-28 127.9 107 64.5
C08p38290 Brassica napus HOM05D000181 ORTHO05D004115 4.9e-28 127.9 107 64.5
BolC8t51404H Brassica oleracea HOM05D005425 ORTHO05D006686 4.9e-28 127.9 107 64.5
BraA09t40938Z Brassica rapa HOM05D005425 ORTHO05D006686 4.9e-28 127.9 107 64.5
SMO351G0348 Selaginella moellendorffii HOM05D005425 ORTHO05D006686 8.3e-28 127.1 103 58.3
AagrBONN_evm.TU.Sc2ySwM_344.3815 Anthoceros agrestis HOM05D005425 ORTHO05D006686 1.1e-27 126.7 102 60.8
BcaB08g35283 Brassica carinata HOM05D005425 ORTHO05D006686 1.9e-27 125.9 107 63.6
AL4G18820 Arabidopsis lyrata HOM05D005425 ORTHO05D006686 2.4e-27 125.6 107 62.6
PGR142G0340 Punica granatum HOM05D005425 ORTHO05D006686 2.4e-27 125.6 115 60.0
vmacro13523 Vaccinium macrocarpon HOM05D005425 ORTHO05D006686 2.4e-27 125.6 104 65.4
Aa31LG5G9560 Aethionema arabicum HOM05D005425 ORTHO05D006686 1.6e-26 122.9 107 62.6
Mapoly0059s0086 Marchantia polymorpha HOM05D005425 ORTHO05D006686 2.7e-26 122.1 95 64.2
Thhalv10002166m.g Eutrema salsugineum HOM05D005425 ORTHO05D006686 1.1e-19 100.1 85 63.5
CBR_g16036 Chara braunii HOM05D005425 ORTHO05D006686 4.1e-19 98.2 105 48.6
Thhalv10002673m.g Eutrema salsugineum HOM05D005425 ORTHO05D006686 1.2e-15 86.7 62 74.2
Zm00001eb432380 Zea mays HOM05D005425 ORTHO05D006686 9.0e-14 80.5 64 70.3
Zm00001eb041420 Zea mays HOM05D001962 ORTHO05D002236 7.3e-08 60.8 35 88.6
Oeu020536.1 Olea europaea HOM05D005425 ORTHO05D006686 2.1e-07 59.3 56 62.5
SGA_v2.0_scaffold8G04307 Striga asiatica HOM05D004888 ORTHO05D005792 3.6e-07 58.5 102 38.2
unitig_62.g23280 Utricularia gibba HOM05D004888 ORTHO05D005792 1.1e-06 57.0 100 40.0
MSTRG.6911 Avicennia marina HOM05D004888 ORTHO05D005792 1.4e-06 56.6 102 38.2
FvH4_1g06370 Fragaria vesca HOM05D005425 ORTHO05D046282 1.4e-06 56.6 60 56.7
Migut.M01776 Erythranthe guttata HOM05D004888 ORTHO05D005792 1.8e-06 56.2 101 37.6
Manes.03G124500 Manihot esculenta HOM05D004888 ORTHO05D005792 1.8e-06 56.2 102 34.3
CAN.G1781.4 Capsicum annuum HOM05D004888 ORTHO05D005792 4.0e-06 55.1 104 36.5
FAN19G2796 Fragaria x ananassa HOM05D005425 ORTHO05D046282 4.0e-06 55.1 60 55.0
Nitab4.5_0001393g0120 Nicotiana tabacum HOM05D004888 ORTHO05D005792 5.3e-06 54.7 102 36.3
PGSC0003DMG400014390 Solanum tuberosum HOM05D004888 ORTHO05D005792 5.3e-06 54.7 102 36.3
Duzib213G0117 Durio zibethinus HOM05D004888 ORTHO05D005792 9.0e-06 53.9 102 35.3
Nitab4.5_0005048g0090 Nicotiana tabacum HOM05D004888 ORTHO05D005792 9.0e-06 53.9 95 37.9
QL08p010712 Quercus lobata HOM05D004888 ORTHO05D005792 9.0e-06 53.9 102 37.3
QL08p011155 Quercus lobata HOM05D004888 ORTHO05D005792 9.0e-06 53.9 102 37.3


User provided reference genes

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