Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 1.5e-97 359.4 168 100.0
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 2.1e-94 349.0 168 95.8
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 3.5e-94 348.2 168 95.8
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 3.5e-94 348.2 168 95.8
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 4.6e-94 347.8 168 95.8
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 1.7e-93 345.9 168 94.6
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 3.0e-93 345.1 168 94.6
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 5.1e-93 344.4 168 94.0
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 1.1e-92 343.2 168 94.0
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 1.3e-91 339.7 168 93.5
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 1.6e-91 339.3 168 91.7
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 2.1e-91 339.0 168 92.3
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 2.1e-91 339.0 168 91.7
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 8.1e-91 337.0 162 95.1
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 8.1e-91 337.0 168 89.9
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 2.4e-90 335.5 168 92.3
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 2.4e-90 335.5 168 89.9
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 4.0e-90 334.7 168 89.9
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 6.9e-90 334.0 164 92.1
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 1.5e-89 332.8 168 89.9
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.5e-89 332.8 167 89.8
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 1.5e-89 332.8 167 89.8
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 2.6e-89 332.0 168 89.9
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 2.6e-89 332.0 168 89.9
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 2.6e-89 332.0 165 91.5
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 3.4e-89 331.6 165 90.3
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 7.6e-89 330.5 166 89.8
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 7.6e-89 330.5 166 90.4
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 7.6e-89 330.5 166 89.8
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 9.9e-89 330.1 167 89.2
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 9.9e-89 330.1 168 88.7
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.3e-88 329.7 168 89.9
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.3e-88 329.7 168 89.9
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 1.7e-88 329.3 170 88.2
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 1.7e-88 329.3 164 90.2
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 1.7e-88 329.3 168 88.7
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 2.2e-88 328.9 168 88.7
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 2.9e-88 328.6 169 89.9
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 2.9e-88 328.6 165 90.3
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 3.8e-88 328.2 162 91.4
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 3.8e-88 328.2 168 88.1
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 4.9e-88 327.8 168 88.7
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 4.9e-88 327.8 170 89.4
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 4.9e-88 327.8 165 88.5
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 8.4e-88 327.0 168 88.7
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 1.1e-87 326.6 165 89.7
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 1.4e-87 326.2 168 86.9
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.9e-87 325.9 168 87.5
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.4e-87 325.5 162 91.4
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.2e-87 325.1 168 87.5
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 4.2e-87 324.7 165 87.9
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 5.4e-87 324.3 166 88.0
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 9.3e-87 323.6 161 90.1
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 9.3e-87 323.6 159 92.5
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 9.3e-87 323.6 162 88.3
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 9.3e-87 323.6 168 87.5
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 1.6e-86 322.8 168 88.1
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 2.1e-86 322.4 168 86.9
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.7e-86 322.0 168 86.3
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 3.5e-86 321.6 166 88.0
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 4.6e-86 321.2 168 85.7
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 6.0e-86 320.9 163 89.6
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 6.0e-86 320.9 168 85.7
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 7.9e-86 320.5 160 91.2
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.0e-85 320.1 168 85.7
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.0e-85 320.1 168 85.7
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 2.3e-85 318.9 162 89.5
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 2.3e-85 318.9 162 89.5
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 2.3e-85 318.9 168 85.1
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 3.9e-85 318.2 168 84.5
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 3.9e-85 318.2 165 85.5
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 8.7e-85 317.0 163 88.3
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 4.3e-84 314.7 174 82.2
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 5.6e-84 314.3 162 85.8
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 7.3e-84 313.9 165 86.1
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 7.3e-84 313.9 164 86.6
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 7.3e-84 313.9 164 86.6
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 9.6e-84 313.5 168 85.1
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 9.6e-84 313.5 165 86.1
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.6e-83 312.8 163 85.9
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 2.8e-83 312.0 174 81.0
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 2.8e-83 312.0 174 81.6
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 2.8e-83 312.0 172 82.0
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 6.2e-83 310.8 160 85.0
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 6.2e-83 310.8 162 86.4
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 8.1e-83 310.5 160 86.2
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 8.1e-83 310.5 160 86.2
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 8.1e-83 310.5 160 86.2
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 8.1e-83 310.5 160 86.2
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 8.1e-83 310.5 160 86.2
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 1.4e-82 309.7 161 85.7
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 3.1e-82 308.5 162 83.3
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 9.0e-82 307.0 168 82.7
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 1.2e-81 306.6 182 79.1
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 1.5e-81 306.2 160 86.9
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 2.6e-81 305.4 174 79.9
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 1.1e-79 300.1 185 76.8
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 4.3e-76 288.1 144 92.4
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 3.4e-65 251.9 168 70.2
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 2.1e-62 242.7 120 91.7
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 4.8e-59 231.5 122 84.4
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 1.8e-58 229.6 160 61.9
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 5.5e-55 218.0 110 89.1
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.1e-50 203.8 102 86.3
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 5.2e-37 158.3 119 58.0
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 3.5e-33 145.6 69 97.1
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.1e-26 124.0 66 86.4
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 3.5e-25 119.0 62 83.9
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.9e-19 98.6 50 90.0
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 3.1e-18 95.9 52 80.8


User provided reference genes

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