Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 1.9e-71 272.3 133 100.0
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 1.1e-42 176.8 122 73.8
Lalb_Chr13g0301201 Lupinus albus HOM05D003969 ORTHO05D003125 8.0e-41 170.6 123 71.5
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 1.4e-40 169.9 122 71.3
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 2.0e-39 166.0 138 64.5
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 2.2e-38 162.5 130 69.2
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 3.7e-38 161.8 136 66.2
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 4.8e-38 161.4 139 60.4
TPR.G15776 Trifolium pratense HOM05D003969 ORTHO05D003125 1.1e-37 160.2 145 60.0
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 3.1e-37 158.7 128 62.5
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 2.0e-31 139.4 140 57.1
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.6e-20 103.2 141 48.2
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 2.7e-20 102.4 139 46.8
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 6.6e-19 97.8 139 45.3
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.9e-18 96.3 147 46.9
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 5.5e-18 94.7 140 44.3
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 1.8e-16 89.7 156 42.9
PGSC0003DMG400036991 Solanum tuberosum HOM05D003969 ORTHO05D003125 4.0e-16 88.6 135 40.7
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 6.8e-16 87.8 140 39.3
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 8.9e-16 87.4 138 40.6
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 8.9e-16 87.4 138 40.6
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 1.5e-15 86.7 117 41.9
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 1.5e-15 86.7 117 45.3
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 4.4e-15 85.1 139 43.9
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 5.7e-15 84.7 140 37.9
Sopen07g003200 Solanum pennellii HOM05D003969 ORTHO05D003125 5.7e-15 84.7 139 41.7
PGSC0003DMG400030696 Solanum tuberosum HOM05D003969 ORTHO05D003125 5.7e-15 84.7 145 40.0
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 9.8e-15 84.0 123 40.7
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 9.8e-15 84.0 114 43.9
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 9.8e-15 84.0 123 40.7
Solyc07g007150.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 9.8e-15 84.0 131 42.7
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 2.2e-14 82.8 147 38.1
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 4.9e-14 81.6 131 42.7
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 4.9e-14 81.6 131 41.2
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 6.3e-14 81.3 143 39.2
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 8.3e-14 80.9 153 37.3
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 1.1e-13 80.5 136 40.4
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 1.4e-13 80.1 99 47.5
Thhalv10005689m.g Eutrema salsugineum HOM05D003969 ORTHO05D003125 1.4e-13 80.1 139 40.3
CSS0019227 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 5.4e-13 78.2 123 46.3
CSS0049905 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 5.4e-13 78.2 123 46.3
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 5.4e-13 78.2 118 41.5
CAN.G551.21 Capsicum annuum HOM05D003969 ORTHO05D003125 7.0e-13 77.8 118 43.2
Nitab4.5_0017863g0010 Nicotiana tabacum HOM05D003969 ORTHO05D003125 7.0e-13 77.8 128 42.2
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 7.0e-13 77.8 132 41.7
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 9.2e-13 77.4 134 39.6
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 9.2e-13 77.4 112 42.9
Sp7g07270 Schrenkiella parvula HOM05D003969 ORTHO05D003125 1.6e-12 76.6 130 41.5
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 2.0e-12 76.3 86 55.8
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 2.7e-12 75.9 64 59.4
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.7e-12 75.9 124 40.3
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 3.5e-12 75.5 150 36.7
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 3.5e-12 75.5 146 37.0
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 3.5e-12 75.5 110 41.8
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 7.8e-12 74.3 167 35.3
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 1.0e-11 73.9 83 54.2
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 1.0e-11 73.9 128 40.6
Carub.0007s3088 Capsella rubella HOM05D003969 ORTHO05D003125 1.3e-11 73.6 137 37.2
Aa31sc598G40 Aethionema arabicum HOM05D003969 ORTHO05D003125 1.7e-11 73.2 136 39.7
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 1.7e-11 73.2 132 40.9
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 2.3e-11 72.8 92 51.1
CDE02G3523 Ceratophyllum demersum HOM05D000894 ORTHO05D001833 2.3e-11 72.8 109 43.1
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 2.9e-11 72.4 148 35.8
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.9e-11 72.4 65 55.4
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 2.9e-11 72.4 106 44.3
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 5.0e-11 71.6 72 47.2
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 5.0e-11 71.6 168 36.3
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 5.0e-11 71.6 75 49.3
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 5.0e-11 71.6 75 49.3
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 5.0e-11 71.6 164 37.8
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 6.6e-11 71.2 167 34.7
PGR142G4289 Punica granatum HOM05D003969 ORTHO05D003125 6.6e-11 71.2 135 40.7
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 8.6e-11 70.9 111 38.7
SGA_v2.0_scaffold500G52494 Striga asiatica HOM05D003969 ORTHO05D003125 8.6e-11 70.9 124 39.5
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 1.1e-10 70.5 78 50.0
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 1.5e-10 70.1 126 39.7
MSTRG.26029 Avicennia marina HOM05D003969 ORTHO05D003125 1.9e-10 69.7 76 52.6
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 1.9e-10 69.7 129 38.8
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 1.9e-10 69.7 129 38.8
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 2.5e-10 69.3 109 44.0
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 2.5e-10 69.3 65 53.8
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 3.3e-10 68.9 63 54.0
CARHR217160 Cardamine hirsuta HOM05D003969 ORTHO05D003125 4.3e-10 68.6 135 37.0
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 4.3e-10 68.6 129 41.9
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 4.3e-10 68.6 118 41.5
Rhsim01G0052800 Rhododendron simsii HOM05D016725 ORTHO05D003125 4.3e-10 68.6 127 35.4
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 4.3e-10 68.6 109 40.4
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 7.3e-10 67.8 63 58.7
Peaxi162Scf00315g00011 Petunia axillaris HOM05D003969 ORTHO05D003125 7.3e-10 67.8 90 46.7
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 7.3e-10 67.8 135 37.0
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 9.5e-10 67.4 65 52.3
THA.LOC104815394 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 9.5e-10 67.4 104 38.5
Gohir.A05G056900 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.2e-09 67.0 63 54.0
MSTRG.10635 Avicennia marina HOM05D003969 ORTHO05D003125 1.6e-09 66.6 118 42.4
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.6e-09 66.6 78 52.6
Gohir.D05G059000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 2.1e-09 66.2 63 55.6
Rhsim01G0050100 Rhododendron simsii HOM05D016725 ORTHO05D003125 2.1e-09 66.2 132 37.1
HPP92_023807 Vanilla planifolia HOM05D003969 ORTHO05D003125 2.1e-09 66.2 116 34.5
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 2.8e-09 65.9 109 41.3
AT5G35090 Arabidopsis thaliana HOM05D003969 ORTHO05D003125 3.6e-09 65.5 94 45.7
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 3.6e-09 65.5 106 41.5
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 3.6e-09 65.5 114 40.4
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 3.6e-09 65.5 121 37.2
A08p09570 Brassica napus HOM05D003969 ORTHO05D003125 4.7e-09 65.1 73 50.7
BraA08t32954Z Brassica rapa HOM05D003969 ORTHO05D003125 4.7e-09 65.1 73 50.7
Gorai.009G060100 Gossypium raimondii HOM05D003969 ORTHO05D003125 4.7e-09 65.1 63 54.0
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 4.7e-09 65.1 111 41.4
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 8.0e-09 64.3 60 55.0
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 8.0e-09 64.3 64 51.6
Atru.chr7.265 Acer truncatum HOM05D003969 ORTHO05D003125 1.0e-08 63.9 124 36.3
Aqoxy7G03536 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 1.0e-08 63.9 119 41.2
CANSAT11G0887 Cannabis sativa HOM05D003969 ORTHO05D003125 1.0e-08 63.9 130 37.7
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.0e-08 63.9 78 52.6
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 1.4e-08 63.5 108 37.0
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.4e-08 63.5 61 52.5
THA.LOC104808923 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 1.4e-08 63.5 151 31.8
Actinidia23308 Actinidia chinensis HOM05D003969 ORTHO05D003125 1.8e-08 63.2 71 52.1
AL7G43940 Arabidopsis lyrata HOM05D003969 ORTHO05D003125 1.8e-08 63.2 131 35.1
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 2.3e-08 62.8 71 43.7
Rhsim01G0052600 Rhododendron simsii HOM05D016725 ORTHO05D003125 2.3e-08 62.8 94 44.7
THA.LOC104815009 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 2.3e-08 62.8 142 33.8
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 3.1e-08 62.4 110 40.0
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 4.0e-08 62.0 101 38.6
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 4.0e-08 62.0 119 37.0
Glyma.14G112500 Glycine max HOM05D003969 ORTHO05D003125 5.2e-08 61.6 84 48.8
MSTRG.10639 Avicennia marina HOM05D003969 ORTHO05D003125 8.9e-08 60.8 114 40.4
AUR62031569 Chenopodium quinoa HOM05D003969 ORTHO05D003125 8.9e-08 60.8 110 38.2
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 8.9e-08 60.8 94 42.6
QL02p091243 Quercus lobata HOM05D003969 ORTHO05D003125 1.2e-07 60.5 149 32.2
Rhsim01G0050000 Rhododendron simsii HOM05D016725 ORTHO05D003125 1.2e-07 60.5 116 37.1
Nitab4.5_0001751g0090 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.5e-07 60.1 100 40.0
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 2.0e-07 59.7 138 40.6
Sc23g0006550 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.0e-07 59.7 125 38.4
AUR62012444 Chenopodium quinoa HOM05D003969 ORTHO05D003125 3.4e-07 58.9 110 37.3
THA.LOC104814116 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 3.4e-07 58.9 114 36.0
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 5.8e-07 58.2 66 51.5
Peaxi162Scf01184g00133 Petunia axillaris HOM05D003969 ORTHO05D003125 5.8e-07 58.2 122 33.6
vmacro12402 Vaccinium macrocarpon HOM05D006851 ORTHO05D008844 5.8e-07 58.2 102 35.3
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 7.5e-07 57.8 134 34.3
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 9.8e-07 57.4 70 48.6
Manes.14G138428 Manihot esculenta HOM05D003969 ORTHO05D003125 9.8e-07 57.4 77 49.4
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 1.3e-06 57.0 71 40.8
Glyma.17G215400 Glycine max HOM05D013068 ORTHO05D003125 1.7e-06 56.6 92 42.4
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 1.7e-06 56.6 122 36.1
Gohir.A05G011500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 2.2e-06 56.2 86 38.4
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 2.2e-06 56.2 89 40.4
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 2.2e-06 56.2 89 40.4
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 3.7e-06 55.5 106 39.6
FAN15G0756 Fragaria x ananassa HOM05D019695 ORTHO05D022679 3.7e-06 55.5 71 49.3
Gohir.D07G034000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 3.7e-06 55.5 96 35.4
Gorai.001G035600 Gossypium raimondii HOM05D003969 ORTHO05D003125 3.7e-06 55.5 96 35.4
Lalb_Chr22g0361461 Lupinus albus HOM05D013068 ORTHO05D003125 3.7e-06 55.5 58 55.2
Thecc.09G141500 Theobroma cacao HOM05D003969 ORTHO05D003125 3.7e-06 55.5 86 39.5
Aqoxy7G00610 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 4.9e-06 55.1 114 37.7
Gohir.D05G012200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 4.9e-06 55.1 101 35.6
Gorai.009G012500 Gossypium raimondii HOM05D003969 ORTHO05D003125 4.9e-06 55.1 101 35.6
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 6.4e-06 54.7 89 39.3
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 8.3e-06 54.3 119 32.8
Eucgr.C01701 Eucalyptus grandis HOM05D003969 ORTHO05D003125 8.3e-06 54.3 89 39.3
Sed0014973 Sechium edule HOM05D003969 ORTHO05D003125 8.3e-06 54.3 102 37.3
SGA_v2.0_scaffold64G21997 Striga asiatica HOM05D003969 ORTHO05D003125 8.3e-06 54.3 127 34.6


User provided reference genes

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