Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0075981 Lupinus albus HOM05D007418 ORTHO05D009419 2.6e-113 412.1 223 100.0
Lj6g0008878 Lotus japonicus HOM05D007418 ORTHO05D009419 4.5e-81 305.1 194 79.4
Ca_16377_v3 Cicer arietinum L. HOM05D007418 ORTHO05D009419 1.5e-79 300.1 194 77.3
arahy.Tifrunner.gnm1.ann1.ZH41ZF Arachis hypogaea HOM05D007418 ORTHO05D009419 3.6e-78 295.4 192 77.1
Phvul.001G269400 Phaseolus vulgaris HOM05D007418 ORTHO05D009419 1.0e-77 293.9 187 78.6
Psat5g101120 Pisum sativum HOM05D007418 ORTHO05D009419 6.8e-77 291.2 215 69.3
TPR.G19319 Trifolium pratense HOM05D007418 ORTHO05D009419 6.8e-77 291.2 194 74.7
Glyma.04G122600 Glycine max HOM05D007418 ORTHO05D009419 1.2e-76 290.4 187 79.1
VMungo0464G0510 Vigna mungo HOM05D007418 ORTHO05D009419 2.8e-75 285.8 187 78.1
Medtr3g083530 Medicago truncatula HOM05D007418 ORTHO05D009419 1.8e-74 283.1 194 73.2
arahy.Tifrunner.gnm1.ann1.WR82LC Arachis hypogaea HOM05D007418 ORTHO05D009419 7.7e-73 277.7 225 65.8
ClCG03G014480 Citrullus lanatus HOM05D007418 ORTHO05D009419 3.5e-65 252.3 193 63.7
MELO3C029305.2 Cucumis melo HOM05D007418 ORTHO05D009419 3.5e-65 252.3 193 63.7
CANSAT11G2630 Cannabis sativa HOM05D007418 ORTHO05D009419 6.6e-64 248.1 200 60.0
QL01p009000 Quercus lobata HOM05D007418 ORTHO05D009419 1.6e-62 243.4 192 65.6
CsaV3_1G041690 Cucumis sativus L. HOM05D007418 ORTHO05D009419 2.8e-62 242.7 193 60.6
Cfa019012 Carpinus fangiana HOM05D000059 ORTHO05D000528 1.0e-61 240.7 192 62.0
Prupe.6G003800 Prunus persica HOM05D007418 ORTHO05D009419 4.0e-61 238.8 200 58.5
FvH4_3g45540 Fragaria vesca HOM05D007418 ORTHO05D009419 2.0e-60 236.5 193 59.1
RcHm_v2.0_Chr5g0083721 Rosa chinensis HOM05D007418 ORTHO05D009419 2.6e-60 236.1 193 58.0
MD11G1003800 Malus domestica HOM05D007418 ORTHO05D009419 1.1e-55 220.7 198 55.1
FAN21G2280 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.5e-55 220.3 193 56.0
FAN11G0209 Fragaria x ananassa HOM05D007418 ORTHO05D009419 5.6e-55 218.4 193 55.4
FAN25G3222 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.6e-54 216.9 222 50.0
CiPaw.13G176700 Carya illinoinensis HOM05D007418 ORTHO05D009419 2.9e-51 206.1 152 65.1
Eucgr.J01769 Eucalyptus grandis HOM05D007418 ORTHO05D009419 1.1e-50 204.1 198 52.0
AUR62019167 Chenopodium quinoa HOM05D007418 ORTHO05D009419 1.9e-50 203.4 191 53.4
PGR119G2313 Punica granatum HOM05D007418 ORTHO05D009419 4.1e-50 202.2 198 51.0
Zm00001eb061520 Zea mays HOM05D007418 ORTHO05D009419 1.2e-49 200.7 190 53.2
Sed0010168 Sechium edule HOM05D007418 ORTHO05D009419 1.6e-49 200.3 155 61.3
Dinv13469 Davidia involucrata HOM05D007418 ORTHO05D009419 2.1e-49 199.9 190 53.2
SalBow2G0815 Salvia bowleyana HOM05D007418 ORTHO05D009419 2.7e-49 199.5 187 53.5
Actinidia16244 Actinidia chinensis HOM05D007418 ORTHO05D009419 4.6e-49 198.7 190 54.2
Haze_07392 Corylus avellana HOM05D007418 ORTHO05D009419 6.0e-49 198.4 311 38.6
ATR0737G157 Amborella trichopoda HOM05D007418 ORTHO05D009419 7.8e-49 198.0 195 54.9
Nn7g35872 Nelumbo nucifera HOM05D007418 ORTHO05D009419 1.7e-48 196.8 198 50.5
Aqoxy1G00469 Aquilegia oxysepala HOM05D002514 ORTHO05D002761 3.0e-48 196.1 198 50.5
PSO339G6348 Papaver somniferum HOM05D007418 ORTHO05D009419 3.0e-48 196.1 191 52.4
GSVIVG01025464001 Vitis vinifera HOM05D007418 ORTHO05D009419 5.1e-48 195.3 190 55.3
PSO384G4713 Papaver somniferum HOM05D007418 ORTHO05D009419 6.6e-48 194.9 191 51.8
ECA248G1985 Erigeron canadensis HOM05D007418 ORTHO05D009419 1.1e-47 194.1 191 50.3
HanXRQChr01g0021361 Helianthus annuus HOM05D007418 ORTHO05D009419 2.5e-47 193.0 191 49.7
CAN.G752.2 Capsicum annuum HOM05D007418 ORTHO05D009419 3.3e-47 192.6 189 50.8
Solyc01g044490.4 Solanum lycopersicum HOM05D007418 ORTHO05D009419 3.3e-47 192.6 190 51.6
Thecc.06G017000 Theobroma cacao HOM05D007418 ORTHO05D009419 3.3e-47 192.6 190 49.5
COL.COLO4_22858 Corchorus olitorius HOM05D007418 ORTHO05D009419 5.6e-47 191.8 191 49.2
Sopen01g018620 Solanum pennellii HOM05D007418 ORTHO05D009419 5.6e-47 191.8 190 51.6
Migut.D02561 Erythranthe guttata HOM05D007418 ORTHO05D009419 1.2e-46 190.7 189 51.9
Gorai.009G114600 Gossypium raimondii HOM05D007418 ORTHO05D009419 2.1e-46 189.9 190 48.4
MSTRG.20939 Avicennia marina HOM05D007418 ORTHO05D009419 2.8e-46 189.5 191 51.3
TWI60G0114 Tripterygium wilfordii HOM05D007418 ORTHO05D009419 3.6e-46 189.1 199 50.8
Gohir.A05G110100 Gossypium hirsutum HOM05D007418 ORTHO05D009419 4.7e-46 188.7 190 47.9
Duzib160G0534 Durio zibethinus HOM05D007418 ORTHO05D009419 6.2e-46 188.3 221 43.9
AUR62040906 Chenopodium quinoa HOM05D007418 ORTHO05D009419 5.2e-45 185.3 178 52.8
Gohir.D05G110400 Gossypium hirsutum HOM05D007418 ORTHO05D009419 1.2e-44 184.1 204 45.6
CAN.G782.23 Capsicum annuum HOM05D007418 ORTHO05D009419 2.6e-44 183.0 190 47.9
TAR369G1115 Trochodendron aralioides HOM05D007418 ORTHO05D009419 4.4e-44 182.2 196 50.0
Potri.001G004300 Populus trichocarpa HOM05D007418 ORTHO05D009419 7.6e-44 181.4 193 47.2
Pp3c1_29390 Physcomitrium patens HOM05D007418 ORTHO05D009419 3.2e-42 176.0 235 43.4
Manes.05G202800 Manihot esculenta HOM05D007418 ORTHO05D009419 5.4e-42 175.3 196 45.4
Thhalv10021419m.g Eutrema salsugineum HOM05D007418 ORTHO05D009419 2.7e-41 172.9 189 44.4
Mapoly0009s0101 Marchantia polymorpha HOM05D007418 ORTHO05D009419 3.5e-41 172.6 192 47.4
Oeu023704.1 Olea europaea HOM05D007418 ORTHO05D009419 4.6e-41 172.2 168 54.2
BolC5t33821H Brassica oleracea HOM05D007418 ORTHO05D009419 6.0e-41 171.8 192 43.8
BraA05t22194Z Brassica rapa HOM05D007418 ORTHO05D009419 6.0e-41 171.8 192 43.8
Ciclev10016443m.g Citrus clementina HOM05D007418 ORTHO05D009419 1.3e-40 170.6 191 45.0
Sp3g14020 Schrenkiella parvula HOM05D007418 ORTHO05D009419 2.3e-40 169.9 190 44.2
BcaC05g28944 Brassica carinata HOM05D007418 ORTHO05D006651 3.0e-40 169.5 191 43.5
C05p50730 Brassica napus HOM05D007418 ORTHO05D006651 3.0e-40 169.5 191 43.5
Carub.0007s1463 Capsella rubella HOM05D007418 ORTHO05D009419 3.0e-40 169.5 189 43.4
AL7G26640 Arabidopsis lyrata HOM05D007418 ORTHO05D009419 5.1e-40 168.7 189 42.9
Aa31LG11G8030 Aethionema arabicum HOM05D007418 ORTHO05D009419 6.6e-40 168.3 189 43.4
AT4G26310 Arabidopsis thaliana HOM05D007418 ORTHO05D009419 8.6e-40 167.9 196 41.8
CARHR233880 Cardamine hirsuta HOM05D007418 ORTHO05D009419 8.6e-40 167.9 189 42.9
Peaxi162Scf00005g00613 Petunia axillaris HOM05D007418 ORTHO05D009419 1.2e-38 164.1 168 50.0
SMO172G0180 Selaginella moellendorffii HOM05D007418 ORTHO05D009419 3.6e-38 162.5 190 44.7
A05p33720 Brassica napus HOM05D007418 ORTHO05D006651 4.7e-38 162.2 191 42.9
Cc01_g03260 Coffea canephora HOM05D007418 ORTHO05D009419 8.9e-37 157.9 169 48.5
Atru.chr3.2092 Acer truncatum HOM05D007418 ORTHO05D009419 1.2e-36 157.5 169 47.9
Sabra01G0003000 Salix brachista HOM05D007418 ORTHO05D009419 1.2e-36 157.5 192 42.7
Cc01_g00020 Coffea canephora HOM05D007418 ORTHO05D009419 1.5e-36 157.1 167 49.1
THA.LOC104817736 Tarenaya hassleriana HOM05D007418 ORTHO05D009419 1.5e-36 157.1 191 39.8
DCAR_025361 Daucus carota HOM05D007418 ORTHO05D009419 7.6e-36 154.8 161 49.7
MBI04_g37007_MAGBIO Magnolia biondii HOM05D007418 ORTHO05D009419 4.9e-35 152.1 160 52.5
CBR_g28818 Chara braunii HOM05D007418 ORTHO05D009419 8.4e-35 151.4 195 40.5
Lsat_1_v5_gn_1_67260 Lactuca sativa HOM05D007418 ORTHO05D009419 1.2e-33 147.5 168 46.4
AagrBONN_evm.TU.Sc2ySwM_344.2531 Anthoceros agrestis HOM05D007418 ORTHO05D009419 1.6e-33 147.1 167 48.5
SGA_v2.0_scaffold6G03369 Striga asiatica HOM05D007418 ORTHO05D009419 3.5e-33 146.0 145 49.7
HPP92_000821 Vanilla planifolia HOM05D007418 ORTHO05D009419 1.0e-32 144.4 170 49.4
CAN.G132.16 Capsicum annuum HOM05D007418 ORTHO05D009419 2.3e-32 143.3 185 42.2
unitig_899.g15026 Utricularia gibba HOM05D007418 ORTHO05D009419 6.6e-32 141.7 149 49.0
Hma1.2p1_0062F.1_g034220 Hydrangea macrophylla HOM05D007418 ORTHO05D009419 1.2e-28 131.0 135 50.4
Sc06g0004180 Simmondsia chinensis HOM05D007418 ORTHO05D009419 3.8e-27 125.9 119 52.1
QL04p006930 Quercus lobata HOM05D007418 ORTHO05D009419 8.4e-27 124.8 86 68.6
vmacro04241 Vaccinium macrocarpon HOM05D007418 ORTHO05D009419 1.9e-26 123.6 314 30.9
Nitab4.5_0004630g0080 Nicotiana tabacum HOM05D007418 ORTHO05D009419 1.3e-24 117.5 111 49.5
Cre06.g263050 Chlamydomonas reinhardtii HOM05D007418 ORTHO05D009419 1.5e-20 104.0 191 32.5
MD03G1004200 Malus domestica HOM05D007418 ORTHO05D009419 3.0e-16 89.7 199 31.7
Nitab4.5_0002351g0010 Nicotiana tabacum HOM05D007418 ORTHO05D009419 5.1e-16 89.0 88 47.7
MCO01G577 Micromonas commoda HOM05D005727 ORTHO05D009419 2.8e-14 83.2 191 28.8
Rhsim13G0232600 Rhododendron simsii HOM05D007418 ORTHO05D009419 1.1e-13 81.3 77 55.8
Nitab4.5_0004630g0090 Nicotiana tabacum HOM05D007418 ORTHO05D009419 2.4e-13 80.1 83 49.4
Manes.08G171300 Manihot esculenta HOM05D005727 ORTHO05D007324 2.6e-12 76.6 189 30.7
Nitab4.5_0010794g0010 Nicotiana tabacum HOM05D005727 ORTHO05D007324 4.5e-12 75.9 183 28.4
EL10Ac7g17100 Beta vulgaris HOM05D005727 ORTHO05D007324 1.0e-11 74.7 190 28.4
CBR_g46434 Chara braunii HOM05D005727 ORTHO05D007324 1.3e-11 74.3 188 29.3
FAN16G1782 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.7e-11 73.9 64 53.1
Ah.15g090030 Amaranthus hybridus HOM05D005727 ORTHO05D007324 2.9e-11 73.2 187 28.3
DCAR_023975 Daucus carota HOM05D005727 ORTHO05D007324 4.9e-11 72.4 187 28.9
AUR62006416 Chenopodium quinoa HOM05D005727 ORTHO05D007324 6.5e-11 72.0 187 27.8
Migut.J00039 Erythranthe guttata HOM05D005727 ORTHO05D007324 2.5e-10 70.1 187 28.9
Ca_16215_v3 Cicer arietinum L. HOM05D009845 ORTHO05D010624 3.2e-10 69.7 66 56.1
SMO358G0605 Selaginella moellendorffii HOM05D005727 ORTHO05D007324 3.2e-10 69.7 194 27.8
Psat5g113560 Pisum sativum HOM05D009845 ORTHO05D010624 5.5e-10 68.9 72 51.4
Medtr7g073250 Medicago truncatula HOM05D005727 ORTHO05D007324 9.3e-10 68.2 188 26.1
TPR.G6905 Trifolium pratense HOM05D009845 ORTHO05D010624 1.2e-09 67.8 67 52.2
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 1.6e-09 67.4 190 27.9
TPR.G14131 Trifolium pratense HOM05D005727 ORTHO05D007324 7.9e-09 65.1 188 25.0
SHI31291 Sapria himalayana HOM05D007418 ORTHO05D009419 3.0e-08 63.2 82 39.0
Lj1g0026374 Lotus japonicus HOM05D009845 ORTHO05D010624 1.1e-07 61.2 49 61.2
Peaxi162Scf01238g00221 Petunia axillaris HOM05D005727 ORTHO05D007324 5.7e-07 58.9 247 24.7
Glyma.04G178200 Glycine max HOM05D009845 ORTHO05D010624 2.8e-06 56.6 63 49.2
Glyma.04G178000 Glycine max HOM05D009845 ORTHO05D010624 3.7e-06 56.2 63 47.6
Medtr3g078610 Medicago truncatula HOM05D009845 ORTHO05D010624 6.3e-06 55.5 67 50.7


User provided reference genes

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