Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 2.1e-147 525.8 284 100.0
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 2.0e-121 439.5 285 84.6
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 2.0e-121 439.5 284 84.9
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 1.7e-120 436.4 284 84.9
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 7.0e-119 431.0 296 81.4
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 2.0e-118 429.5 283 82.7
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 2.0e-118 429.5 283 83.0
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 4.5e-118 428.3 286 81.1
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 5.9e-118 427.9 284 82.7
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 1.9e-116 422.9 285 82.5
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 1.9e-116 422.9 285 81.4
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 2.1e-115 419.5 286 81.8
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 3.6e-115 418.7 284 81.0
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 4.7e-115 418.3 283 79.2
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 6.1e-115 417.9 286 79.7
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 1.4e-114 416.8 285 80.4
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 1.8e-114 416.4 286 79.0
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 1.8e-114 416.4 283 80.2
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 5.2e-114 414.8 239 79.9
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 5.2e-114 414.8 285 83.5
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 1.2e-113 413.7 286 78.3
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 1.2e-113 413.7 286 78.3
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 2.0e-113 412.9 241 79.7
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 2.6e-113 412.5 286 78.3
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 3.4e-113 412.1 285 78.2
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 4.4e-113 411.8 286 79.7
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 2.2e-112 409.5 286 80.1
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 2.8e-112 409.1 286 79.0
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.8e-112 409.1 285 77.5
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 4.8e-112 408.3 285 77.9
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 6.3e-112 407.9 285 79.6
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 1.8e-111 406.4 286 77.3
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.4e-111 406.0 285 77.2
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 3.1e-111 405.6 284 78.5
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 4.1e-111 405.2 288 77.4
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 4.1e-111 405.2 286 78.0
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 7.0e-111 404.4 284 78.2
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 1.6e-110 403.3 305 74.8
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.0e-110 402.9 285 76.8
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 2.7e-110 402.5 230 80.4
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.0e-109 400.6 285 77.5
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 2.9e-109 399.1 286 77.3
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 6.5e-109 397.9 285 78.2
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 8.5e-109 397.5 287 77.7
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 2.5e-108 396.0 221 81.9
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 7.2e-108 394.4 288 77.4
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 2.0e-105 386.3 286 75.2
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 5.7e-105 384.8 286 76.6
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 9.8e-105 384.0 286 76.6
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 9.8e-105 384.0 239 75.7
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 1.3e-104 383.6 240 74.2
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 3.7e-104 382.1 285 76.5
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 1.4e-103 380.2 222 78.4
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.8e-103 379.8 240 74.2
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 3.1e-103 379.0 239 74.9
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 9.1e-103 377.5 236 74.2
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 9.1e-103 377.5 231 78.8
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.0e-102 376.3 229 75.5
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 2.0e-102 376.3 244 73.0
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 2.0e-102 376.3 283 73.5
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 1.0e-101 374.0 240 74.2
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.0e-101 374.0 238 73.5
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 3.8e-101 372.1 287 73.9
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 3.3e-100 369.0 241 71.0
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 5.6e-100 368.2 242 71.5
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 5.6e-100 368.2 233 73.0
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 9.5e-100 367.5 287 73.5
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 9.5e-100 367.5 233 73.0
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 3.6e-99 365.5 244 70.9
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 4.7e-99 365.2 241 71.4
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 1.0e-98 364.0 242 70.7
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 1.0e-98 364.0 231 72.7
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 2.3e-98 362.8 286 71.0
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 5.2e-98 361.7 233 72.5
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 6.8e-98 361.3 243 70.8
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 8.9e-98 360.9 287 71.8
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.2e-97 360.5 239 70.7
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.2e-97 360.5 240 71.2
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 2.0e-97 359.8 243 70.8
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 5.7e-97 358.2 240 70.4
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 1.3e-96 357.1 244 70.5
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 4.9e-96 355.1 246 70.7
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 1.1e-95 354.0 240 71.2
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 1.8e-95 353.2 246 70.3
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 1.2e-94 350.5 243 69.5
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 2.0e-94 349.7 243 67.5
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.7e-94 349.4 273 62.6
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 2.7e-94 349.4 242 69.0
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 3.5e-94 349.0 297 59.9
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 5.0e-93 345.1 284 71.1
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 1.1e-92 344.0 232 68.5
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 2.5e-92 342.8 210 76.7
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 5.6e-92 341.7 260 64.6
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.4e-90 337.0 243 67.1
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 4.0e-90 335.5 245 67.8
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 4.0e-90 335.5 208 72.1
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 4.4e-89 332.0 244 68.4
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 5.8e-89 331.6 285 67.4
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 9.8e-89 330.9 232 68.1
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 9.2e-87 324.3 237 65.0
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 4.6e-86 322.0 224 65.2
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 1.7e-85 320.1 238 64.7
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 1.5e-84 317.0 235 65.5
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 1.9e-84 316.6 221 67.4
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 9.5e-84 314.3 246 65.0
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 9.5e-84 314.3 243 75.3
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 1.8e-82 310.1 245 64.5
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 1.2e-81 307.4 245 64.1
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 5.8e-81 305.1 248 63.3
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 2.9e-80 302.8 238 62.6
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 6.4e-80 301.6 240 63.3
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 8.3e-80 301.2 247 63.2
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 8.3e-80 301.2 249 63.1
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 8.3e-80 301.2 231 76.2
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 3.2e-79 299.3 243 63.4
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 9.2e-79 297.7 247 63.2
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 2.7e-78 296.2 244 62.7
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 7.8e-78 294.7 183 73.2
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 6.6e-77 291.6 242 60.7
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 1.5e-76 290.4 285 62.5
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 1.9e-76 290.0 196 70.4
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 2.5e-76 289.7 230 62.6
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 5.2e-74 282.0 245 60.0
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 1.2e-70 270.8 198 64.6
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 5.1e-69 265.4 227 67.8
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 2.5e-68 263.1 246 57.3
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 3.3e-68 262.7 245 58.0
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 1.8e-66 256.9 217 59.9
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 5.8e-65 251.9 236 58.1
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 1.7e-64 250.4 201 61.7
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 6.0e-62 241.9 247 54.3
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 2.3e-45 186.8 197 54.3
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 2.8e-43 179.9 143 60.1
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 1.2e-41 174.5 131 64.9
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 1.9e-36 157.1 249 39.4
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 6.9e-34 148.7 245 42.0
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 7.6e-33 145.2 240 40.0
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 5.7e-28 129.0 253 34.8
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 6.3e-27 125.6 225 39.6
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 5.3e-26 122.5 224 39.3
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 9.0e-26 121.7 179 44.7
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.0e-25 120.6 226 37.2
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 5.9e-25 119.0 223 37.7
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 8.5e-24 115.2 234 37.2
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 2.5e-23 113.6 230 36.5
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 9.4e-23 111.7 237 35.4
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.6e-22 110.9 234 34.6
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 3.6e-22 109.8 232 35.3
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 6.1e-22 109.0 235 35.7
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 7.9e-22 108.6 52 94.2
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 7.9e-22 108.6 235 35.3
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 1.8e-21 107.5 231 34.2
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 2.3e-21 107.1 256 31.6
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 3.0e-21 106.7 249 33.7
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.5e-20 104.4 223 35.4
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 9.7e-20 101.7 262 34.0
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 2.2e-19 100.5 237 34.2
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 8.5e-16 88.6 248 31.0
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 1.4e-15 87.8 56 71.4
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 2.5e-15 87.0 198 33.8
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 1.2e-14 84.7 174 34.5
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.6e-14 84.3 46 80.4
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 2.1e-14 84.0 248 32.3
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 7.9e-14 82.0 201 32.8
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 2.3e-13 80.5 49 69.4
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 4.8e-11 72.8 262 26.7
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 2.4e-10 70.5 195 31.8
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 5.3e-10 69.3 162 33.3
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 3.5e-09 66.6 186 32.8
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 3.5e-09 66.6 51 56.9
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 7.7e-09 65.5 128 35.9
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 1.5e-07 61.2 150 35.3
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 3.2e-07 60.1 30 76.7
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 5.5e-07 59.3 51 49.0
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 1.2e-06 58.2 58 44.8


User provided reference genes

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