Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0075701 Lupinus albus HOM05D003830 ORTHO05D004446 0.0e+00 1494.6 768 100.0
Lalb_Chr08g0230701 Lupinus albus HOM05D003830 ORTHO05D004446 7.5e-301 1036.9 775 73.0
Lalb_Chr23g0277961 Lupinus albus HOM05D003830 ORTHO05D004446 2.7e-290 1001.9 772 72.0
Glyma.18G009000 Glycine max HOM05D003830 ORTHO05D004446 1.4e-251 873.2 791 64.7
Glyma.11G248200 Glycine max HOM05D003830 ORTHO05D004446 3.1e-246 855.5 793 64.1
Phvul.001G259600 Phaseolus vulgaris HOM05D003830 ORTHO05D004446 5.5e-235 818.1 795 61.8
Ca_16482_v3 Cicer arietinum L. HOM05D003830 ORTHO05D004446 2.4e-230 802.7 794 59.7
arahy.Tifrunner.gnm1.ann1.ZS76EK Arachis hypogaea HOM05D003830 ORTHO05D004446 4.2e-227 792.0 796 60.4
arahy.Tifrunner.gnm1.ann1.D6D033 Arachis hypogaea HOM05D003830 ORTHO05D004446 2.6e-224 782.7 796 59.7
TPR.G22439 Trifolium pratense HOM05D003830 ORTHO05D004446 5.2e-217 758.4 818 56.6
VMungo1383G3029 Vigna mungo HOM05D003830 ORTHO05D004446 1.3e-215 753.8 796 59.0
Phvul.002G176100 Phaseolus vulgaris HOM05D003830 ORTHO05D004446 1.6e-213 746.9 796 57.7
VMungo0251G0774 Vigna mungo HOM05D003830 ORTHO05D004446 6.5e-212 741.5 789 57.2
Lj4g0001101 Lotus japonicus HOM05D003830 ORTHO05D004446 2.7e-210 736.1 796 57.3
Glyma.08G102200 Glycine max HOM05D003830 ORTHO05D004446 2.9e-204 716.1 796 55.5
Glyma.05G145400 Glycine max HOM05D003830 ORTHO05D004446 5.9e-189 665.2 795 53.7
arahy.Tifrunner.gnm1.ann1.JB8DT0 Arachis hypogaea HOM05D003830 ORTHO05D004446 3.4e-176 622.9 797 50.6
arahy.Tifrunner.gnm1.ann1.MTFP9U Arachis hypogaea HOM05D003830 ORTHO05D004446 1.2e-160 571.2 796 47.7
Psat5g094600 Pisum sativum HOM05D003830 ORTHO05D004446 7.6e-160 568.5 785 49.6
QL03p054734 Quercus lobata HOM05D003830 ORTHO05D004446 1.7e-143 514.2 806 45.0
Prupe.1G233200 Prunus persica HOM05D003830 ORTHO05D004446 3.9e-132 476.5 808 43.3
GSVIVG01010345001 Vitis vinifera HOM05D003830 ORTHO05D004446 1.4e-129 468.0 809 42.6
CiPaw.05G115100 Carya illinoinensis HOM05D003830 ORTHO05D004446 7.6e-128 462.2 802 42.1
Thecc.02G274300 Theobroma cacao HOM05D003830 ORTHO05D004446 2.5e-126 457.2 812 42.6
Manes.12G014700 Manihot esculenta HOM05D003830 ORTHO05D004446 7.1e-126 455.7 808 42.2
Cfa009315 Carpinus fangiana HOM05D003830 ORTHO05D008363 1.1e-123 448.4 822 42.0
Manes.13G015800 Manihot esculenta HOM05D003830 ORTHO05D004446 1.5e-123 448.0 801 42.2
Potri.010G056200 Populus trichocarpa HOM05D003830 ORTHO05D004446 1.5e-123 448.0 847 40.3
Potri.008G178600 Populus trichocarpa HOM05D003830 ORTHO05D004446 2.2e-122 444.1 816 41.3
Ciclev10030548m.g Citrus clementina HOM05D003830 ORTHO05D004446 1.2e-120 438.3 809 41.3
Duzib251G0504 Durio zibethinus HOM05D003830 ORTHO05D004446 2.0e-120 437.6 797 41.3
Atru.chr11.2246 Acer truncatum HOM05D003830 ORTHO05D004446 5.9e-120 436.0 801 40.9
Atru.chr11.2261 Acer truncatum HOM05D003830 ORTHO05D004446 5.9e-120 436.0 801 40.9
CANSAT01G2001 Cannabis sativa HOM05D003830 ORTHO05D004446 1.3e-119 434.9 806 42.2
Sabra08G0136300 Salix brachista HOM05D003830 ORTHO05D004446 3.8e-119 433.3 830 40.7
Sabra10G0048900 Salix brachista HOM05D003830 ORTHO05D004446 1.1e-118 431.8 846 39.5
FvH4_4g24320 Fragaria vesca HOM05D003830 ORTHO05D004446 1.4e-118 431.4 839 40.2
MD16G1111800 Malus domestica HOM05D003830 ORTHO05D004446 1.4e-118 431.4 840 40.6
FAN17G1537 Fragaria x ananassa HOM05D003830 ORTHO05D004446 3.2e-118 430.3 833 40.1
RcHm_v2.0_Chr4g0431121 Rosa chinensis HOM05D003830 ORTHO05D004446 1.6e-117 427.9 824 40.2
FAN12G3820 Fragaria x ananassa HOM05D003830 ORTHO05D004446 7.9e-117 425.6 840 40.2
Dinv10992 Davidia involucrata HOM05D003830 ORTHO05D004446 2.3e-116 424.1 801 40.9
Duzib248G1684 Durio zibethinus HOM05D003830 ORTHO05D004446 3.9e-116 423.3 814 41.5
FAN22G2024 Fragaria x ananassa HOM05D003830 ORTHO05D004446 1.1e-115 421.8 835 40.0
MD13G1112200 Malus domestica HOM05D003830 ORTHO05D004446 1.1e-115 421.8 860 39.1
TAR374G0580 Trochodendron aralioides HOM05D003830 ORTHO05D004446 6.3e-114 416.0 812 39.0
CSS0000134 Camellia sinensis var. sinensis HOM05D003830 ORTHO05D004446 6.9e-113 412.5 804 40.5
Cpa.g.c26951.1 Carica papaya HOM05D003830 ORTHO05D004446 3.4e-112 410.2 796 40.3
TAR629G0808 Trochodendron aralioides HOM05D003830 ORTHO05D004446 7.2e-110 402.5 802 39.4
COL.COLO4_23621 Corchorus olitorius HOM05D003830 ORTHO05D004446 4.7e-109 399.8 791 39.6
Gorai.005G171400 Gossypium raimondii HOM05D003830 ORTHO05D004446 2.3e-108 397.5 798 39.6
Duzib268G1283 Durio zibethinus HOM05D003830 ORTHO05D004446 3.0e-108 397.1 797 38.8
TAR622G0818 Trochodendron aralioides HOM05D003830 ORTHO05D004446 2.6e-107 394.0 811 38.1
Gohir.D02G152400 Gossypium hirsutum HOM05D003830 ORTHO05D004446 3.3e-107 393.7 802 39.3
Gohir.A03G128600 Gossypium hirsutum HOM05D003830 ORTHO05D004446 3.7e-106 390.2 802 39.2
Dinv14800 Davidia involucrata HOM05D003830 ORTHO05D004446 7.7e-104 382.5 764 39.8
Nn3g16538 Nelumbo nucifera HOM05D003830 ORTHO05D004446 3.8e-103 380.2 853 37.7
Nn4g22404 Nelumbo nucifera HOM05D003830 ORTHO05D004446 5.2e-100 369.8 843 37.5
Actinidia25761 Actinidia chinensis HOM05D003830 ORTHO05D004446 4.8e-98 363.2 798 37.6
CsaV3_2G025330 Cucumis sativus L. HOM05D003830 ORTHO05D004446 3.1e-97 360.5 806 38.0
TWI75G0226 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 3.5e-96 357.1 802 37.5
Sed0027794 Sechium edule HOM05D003830 ORTHO05D004446 4.5e-96 356.7 791 37.5
ClCG08G017300 Citrullus lanatus HOM05D003830 ORTHO05D004446 1.3e-95 355.1 807 37.7
MELO3C010729.2 Cucumis melo HOM05D003830 ORTHO05D004446 4.7e-93 346.7 805 37.3
Aqoxy3G01454 Aquilegia oxysepala HOM05D003830 ORTHO05D004446 4.8e-90 336.7 788 35.4
TWI18G0501 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 8.3e-90 335.9 796 35.3
Hma1.2p1_0167F.1_g073780 Hydrangea macrophylla HOM05D003830 ORTHO05D004446 5.4e-89 333.2 795 37.4
PGR102G1232 Punica granatum HOM05D003830 ORTHO05D004446 2.0e-88 331.3 801 35.8
Cc11_g16600 Coffea canephora HOM05D003830 ORTHO05D004446 5.9e-88 329.7 793 36.1
Eucgr.H04665 Eucalyptus grandis HOM05D003830 ORTHO05D004446 5.9e-88 329.7 800 36.6
Rhsim12G0030500 Rhododendron simsii HOM05D003830 ORTHO05D004446 9.4e-86 322.4 811 35.0
TWI36G0084 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 1.0e-84 318.9 811 35.5
vmacro01085 Vaccinium macrocarpon HOM05D003830 ORTHO05D004446 8.8e-84 315.8 848 34.3
MBI08_g41743_MAGBIO Magnolia biondii HOM05D003830 ORTHO05D004446 2.6e-83 314.3 789 35.2
Sopen05g009770 Solanum pennellii HOM05D003830 ORTHO05D004446 5.0e-79 300.1 807 34.0
Hma1.2p1_1340F.1_g276750 Hydrangea macrophylla HOM05D003830 ORTHO05D004446 7.2e-78 296.2 780 36.5
PGSC0003DMG400017461 Solanum tuberosum HOM05D003830 ORTHO05D004446 6.1e-77 293.1 801 34.3
Solyc05g014640.3 Solanum lycopersicum HOM05D003830 ORTHO05D004446 2.6e-75 287.7 788 34.3
CAN.G692.1 Capsicum annuum HOM05D003830 ORTHO05D004446 3.4e-75 287.3 817 33.7
EL10Ac6g13438 Beta vulgaris HOM05D003830 ORTHO05D004446 4.9e-74 283.5 799 34.3
DCAR_024085 Daucus carota HOM05D003830 ORTHO05D004446 9.2e-73 279.3 816 35.0
Nitab4.5_0011772g0020 Nicotiana tabacum HOM05D003830 ORTHO05D004446 1.2e-72 278.9 796 33.9
Oeu038669.1 Olea europaea HOM05D003830 ORTHO05D004446 1.2e-72 278.9 795 33.5
Nitab4.5_0000240g0070 Nicotiana tabacum HOM05D003830 ORTHO05D004446 3.5e-72 277.3 817 33.8
AUR62005571 Chenopodium quinoa HOM05D003830 ORTHO05D004446 1.0e-71 275.8 800 34.5
Oeu041685.1 Olea europaea HOM05D003830 ORTHO05D004446 1.3e-71 275.4 802 32.3
SalBow2G2689 Salvia bowleyana HOM05D003830 ORTHO05D004446 7.3e-70 269.6 796 33.0
AUR62024159 Chenopodium quinoa HOM05D003830 ORTHO05D004446 6.2e-69 266.5 802 34.4
Peaxi162Scf00128g00924 Petunia axillaris HOM05D003830 ORTHO05D004446 5.8e-67 260.0 800 32.1
Sc11g0000660 Simmondsia chinensis HOM05D003830 ORTHO05D004446 4.9e-66 256.9 787 33.7
PSO063G3359 Papaver somniferum HOM05D003830 ORTHO05D004446 7.0e-65 253.1 785 31.7
PSO782G2541 Papaver somniferum HOM05D003830 ORTHO05D004446 2.0e-64 251.5 790 31.3
MSTRG.524 Avicennia marina HOM05D003830 ORTHO05D004446 1.3e-63 248.8 802 33.0
DCAR_013711 Daucus carota HOM05D003830 ORTHO05D004446 7.3e-62 243.0 801 33.6
Hund06065 Selenicereus undatus HOM05D003830 ORTHO05D004446 1.2e-59 235.7 854 30.0
MSTRG.7981 Avicennia marina HOM05D003830 ORTHO05D004446 2.2e-58 231.5 806 31.9
Rhsim12G0031400 Rhododendron simsii HOM05D003830 ORTHO05D004446 2.2e-58 231.5 640 34.1
Migut.K00697 Erythranthe guttata HOM05D003830 ORTHO05D004446 2.9e-58 231.1 786 32.8
Oeu056685.2 Olea europaea HOM05D003830 ORTHO05D004446 1.0e-55 222.6 830 29.8
CSS0032396 Camellia sinensis var. sinensis HOM05D003830 ORTHO05D004446 8.6e-55 219.5 584 34.4
Lj6C822T9 Lonicera japonica HOM05D003830 ORTHO05D004446 4.3e-54 217.2 668 33.1
DCAR_007014 Daucus carota HOM05D003830 ORTHO05D004446 4.0e-52 210.7 814 30.3
Actinidia30673 Actinidia chinensis HOM05D003830 ORTHO05D004446 6.4e-50 203.4 462 38.5
CARHR027310 Cardamine hirsuta HOM05D003830 ORTHO05D004446 1.9e-49 201.8 813 31.2
Migut.E00239 Erythranthe guttata HOM05D003830 ORTHO05D004446 1.9e-49 201.8 777 32.3
Aa31sc109G20 Aethionema arabicum HOM05D003830 ORTHO05D004446 7.8e-48 196.4 806 29.3
Thhalv10006616m.g Eutrema salsugineum HOM05D003830 ORTHO05D004446 2.1e-45 188.3 805 30.4
THA.LOC104825519 Tarenaya hassleriana HOM05D003830 ORTHO05D004446 4.4e-43 180.6 780 29.0
Actinidia33257 Actinidia chinensis HOM05D003830 ORTHO05D004446 5.8e-43 180.3 654 29.2
A09p38310 Brassica napus HOM05D003830 ORTHO05D004446 7.6e-43 179.9 788 29.3
SalBow8G5205 Salvia bowleyana HOM05D003830 ORTHO05D004446 7.6e-43 179.9 780 28.2
Psat5g186360 Pisum sativum HOM05D003830 ORTHO05D004446 3.8e-42 177.6 248 44.0
Psat7g035960 Pisum sativum HOM05D003830 ORTHO05D004446 3.8e-42 177.6 225 50.7
BraA09t39341Z Brassica rapa HOM05D003830 ORTHO05D004446 1.4e-41 175.6 788 29.1
HanXRQChr08g0207491 Helianthus annuus HOM05D003830 ORTHO05D004446 4.2e-41 174.1 806 28.4
AT1G27850 Arabidopsis thaliana HOM05D003830 ORTHO05D004446 1.2e-40 172.6 812 28.8
CDE04G0036 Ceratophyllum demersum HOM05D003830 ORTHO05D004446 1.2e-40 172.6 850 27.5
ECA233G0646 Erigeron canadensis HOM05D003830 ORTHO05D004446 1.0e-39 169.5 720 29.6
Carub.0001s2631 Capsella rubella HOM05D003830 ORTHO05D004446 1.3e-39 169.1 816 28.6
HPP92_004598 Vanilla planifolia HOM05D003830 ORTHO05D004446 3.0e-39 167.9 804 27.6
Psat3g121600 Pisum sativum HOM05D003830 ORTHO05D004446 7.3e-38 163.3 203 50.7
C05p26490 Brassica napus HOM05D003830 ORTHO05D004446 1.6e-37 162.2 791 28.2
BolC5t31369H Brassica oleracea HOM05D003830 ORTHO05D004446 1.6e-37 162.2 791 28.1
Sp1g24060 Schrenkiella parvula HOM05D003830 ORTHO05D004446 3.6e-37 161.0 815 29.2
AL1G41340 Arabidopsis lyrata HOM05D003830 ORTHO05D004446 4.8e-37 160.6 814 29.1
CDE07G0717 Ceratophyllum demersum HOM05D003830 ORTHO05D004446 1.4e-36 159.1 828 29.6
ECA234G2423 Erigeron canadensis HOM05D003830 ORTHO05D004446 3.1e-36 157.9 777 27.0
Os12g0239200 Oryza sativa ssp. japonica HOM05D003830 ORTHO05D004446 2.6e-35 154.8 843 26.7
Zm00001eb409890 Zea mays HOM05D003830 ORTHO05D004446 3.4e-35 154.5 849 26.9
Psat4g118720 Pisum sativum HOM05D003830 ORTHO05D004446 9.9e-35 152.9 197 50.3
Lsat_1_v5_gn_4_2860 Lactuca sativa HOM05D003830 ORTHO05D004446 2.9e-34 151.4 791 27.3
A08p26030 Brassica napus HOM05D003830 ORTHO05D004446 7.1e-33 146.7 808 27.4
BraA08t34553Z Brassica rapa HOM05D003830 ORTHO05D004446 4.6e-32 144.1 813 27.7
BolC3t19710H Brassica oleracea HOM05D003830 ORTHO05D004446 7.9e-32 143.3 814 27.4
BcaC05g26779 Brassica carinata HOM05D003830 ORTHO05D004446 2.5e-30 138.3 803 26.8
C03p74620 Brassica napus HOM05D003830 ORTHO05D004446 1.6e-29 135.6 809 26.8
unitig_747.g21131 Utricularia gibba HOM05D003830 ORTHO05D004446 2.8e-29 134.8 789 27.1
Os12g0239000 Oryza sativa ssp. japonica HOM05D003830 ORTHO05D004446 2.6e-27 128.3 872 26.9
HanXRQChr17g0569161 Helianthus annuus HOM05D003830 ORTHO05D004446 5.8e-27 127.1 780 26.9
ATR0609G075 Amborella trichopoda HOM05D003830 ORTHO05D004446 7.1e-25 120.2 614 28.0
BcaNung07311 Brassica carinata HOM05D003830 ORTHO05D004446 1.6e-24 119.0 650 27.7
SEGI_06277 Sequoiadendron giganteum HOM05D003830 ORTHO05D004446 2.1e-24 118.6 848 24.2
Psat5g186320 Pisum sativum HOM05D000280 ORTHO05D004446 3.5e-24 117.9 326 33.7
Actinidia30674 Actinidia chinensis HOM05D003830 ORTHO05D004446 1.3e-21 109.4 213 39.4
SGA_v2.0_scaffold391G50642 Striga asiatica HOM05D003830 ORTHO05D004446 1.3e-21 109.4 783 27.1
Lj6C822T10 Lonicera japonica HOM05D003830 ORTHO05D004446 2.1e-21 108.6 134 50.0
unitig_699.g19949 Utricularia gibba HOM05D003830 ORTHO05D004446 5.3e-20 104.0 410 31.7
FAN07G1399 Fragaria x ananassa HOM05D003830 ORTHO05D004446 1.5e-19 102.4 189 39.7
SGA_v2.0_scaffold87G27127 Striga asiatica HOM05D003830 ORTHO05D004446 9.3e-17 93.2 609 25.5
BcaC05g26601 Brassica carinata HOM05D003830 ORTHO05D004446 2.3e-15 88.6 249 34.5
Zm00001eb133500 Zea mays HOM05D003830 ORTHO05D004446 1.9e-14 85.5 831 23.7
Zm00001eb133580 Zea mays HOM05D003830 ORTHO05D004446 5.7e-14 84.0 785 24.8
Lsat_1_v5_gn_8_150260 Lactuca sativa HOM05D003830 ORTHO05D004446 1.2e-11 76.3 790 22.3
FAN07G1859 Fragaria x ananassa HOM05D003830 ORTHO05D004446 7.6e-11 73.6 112 44.6
Psat4g142680 Pisum sativum HOM05D000493 ORTHO05D001638 1.7e-10 72.4 172 34.3
Psat4g142760 Pisum sativum HOM05D000493 ORTHO05D004446 1.1e-09 69.7 170 33.5
CDE02G1696 Ceratophyllum demersum HOM05D003830 ORTHO05D004446 1.9e-09 68.9 289 26.6
Psat0s2958g0080 Pisum sativum HOM05D003830 ORTHO05D004446 1.2e-08 66.2 78 48.7
SHI17938 Sapria himalayana HOM05D003830 ORTHO05D004446 4.6e-08 64.3 275 26.5
HPP92_006184 Vanilla planifolia HOM05D003830 ORTHO05D004446 3.0e-07 61.6 401 26.4
BcaC05g26769 Brassica carinata HOM05D003830 ORTHO05D004446 1.9e-06 58.9 153 33.3


User provided reference genes

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