Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 8.8e-90 333.6 165 100.0
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 1.9e-60 236.1 183 67.2
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 1.7e-56 223.0 180 68.3
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 1.2e-54 216.9 180 64.4
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 2.7e-54 215.7 177 67.8
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 7.8e-54 214.2 185 64.9
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 1.0e-53 213.8 178 65.7
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 1.3e-53 213.4 186 65.1
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 8.6e-53 210.7 183 62.8
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 1.2e-51 206.8 182 60.4
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 1.6e-51 206.5 186 58.6
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 2.8e-51 205.7 178 60.7
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 1.4e-50 203.4 192 58.9
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 1.8e-50 203.0 182 58.8
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 1.8e-50 203.0 188 58.5
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 3.1e-50 202.2 194 57.7
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 1.5e-49 199.9 192 58.3
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 3.4e-49 198.7 173 60.7
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 3.4e-49 198.7 180 58.3
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 4.4e-49 198.4 188 58.5
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 4.4e-49 198.4 182 56.6
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 7.5e-49 197.6 192 56.2
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 1.3e-48 196.8 194 58.8
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 1.7e-48 196.4 185 59.5
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 2.2e-48 196.1 179 58.7
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 2.9e-48 195.7 147 65.3
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 2.9e-48 195.7 194 56.2
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 3.7e-48 195.3 178 57.3
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 4.9e-48 194.9 184 58.2
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 4.9e-48 194.9 188 57.4
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 1.1e-47 193.7 158 65.8
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 3.2e-47 192.2 194 56.2
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 4.1e-47 191.8 213 50.7
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 5.4e-47 191.4 194 57.7
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 7.1e-47 191.0 161 60.9
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 7.1e-47 191.0 180 57.8
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 1.6e-46 189.9 191 54.5
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 2.7e-46 189.1 194 55.2
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 3.5e-46 188.7 189 55.6
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 4.6e-46 188.3 191 56.0
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 7.8e-46 187.6 191 51.3
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 2.3e-45 186.0 190 51.1
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 3.9e-45 185.3 179 55.3
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 8.6e-45 184.1 162 59.3
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 1.1e-44 183.7 186 54.8
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 3.3e-44 182.2 185 53.5
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 4.3e-44 181.8 193 50.8
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 7.3e-44 181.0 186 54.3
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 2.1e-43 179.5 141 63.1
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 3.6e-43 178.7 171 53.8
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 3.6e-43 178.7 148 60.1
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 4.7e-43 178.3 179 54.7
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 8.1e-43 177.6 180 53.9
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 1.8e-42 176.4 157 58.6
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 2.3e-42 176.0 172 55.8
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 8.9e-42 174.1 185 54.6
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 5.8e-41 171.4 224 45.1
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 2.9e-40 169.1 190 49.5
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 8.4e-40 167.5 143 60.8
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 8.4e-40 167.5 135 60.7
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 1.4e-39 166.8 187 50.8
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 1.4e-39 166.8 179 57.0
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 2.4e-39 166.0 187 51.9
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 4.1e-39 165.2 188 49.5
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 7.1e-39 164.5 199 49.7
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 1.2e-38 163.7 183 52.5
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 1.2e-38 163.7 191 49.7
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 2.1e-38 162.9 187 52.4
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 2.7e-38 162.5 197 49.2
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 4.6e-38 161.8 149 57.7
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 1.7e-37 159.8 169 49.1
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 1.1e-36 157.1 141 57.4
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 1.9e-36 156.4 182 48.9
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 5.6e-36 154.8 124 57.3
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 1.2e-33 147.1 220 45.0
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 1.5e-33 146.7 176 49.4
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 5.8e-33 144.8 197 47.2
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 9.9e-33 144.1 197 47.2
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 9.9e-33 144.1 198 44.9
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 1.3e-32 143.7 145 53.1
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 2.2e-32 142.9 197 46.7
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 2.9e-32 142.5 202 45.5
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 4.2e-31 138.7 102 65.7
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 6.0e-30 134.8 142 50.0
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 1.0e-29 134.0 141 50.4
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 1.3e-29 133.7 117 57.3
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 7.3e-28 127.9 102 61.8
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 2.8e-27 125.9 148 49.3
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 4.5e-25 118.6 85 68.2
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 1.1e-23 114.0 124 50.0
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 1.1e-23 114.0 85 63.5
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 1.1e-23 114.0 83 66.3
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 7.1e-23 111.3 90 65.6
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 2.1e-22 109.8 129 51.2
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 8.7e-21 104.4 70 68.6
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 1.3e-19 100.5 73 64.4
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 6.2e-19 98.2 62 72.6
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 1.4e-18 97.1 88 51.1
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 1.4e-18 97.1 88 51.1
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 6.9e-18 94.7 101 47.5
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 1.5e-17 93.6 152 41.4
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 2.0e-17 93.2 103 50.5
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 2.0e-17 93.2 66 68.2
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 3.4e-17 92.4 58 67.2
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 3.4e-17 92.4 58 67.2
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 5.8e-17 91.7 69 66.7
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 6.4e-16 88.2 90 54.4
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 3.2e-15 85.9 51 72.5
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 2.1e-14 83.2 105 38.1
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 1.3e-13 80.5 90 47.8
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 1.3e-13 80.5 107 35.5
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 3.0e-13 79.3 43 79.1
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 3.9e-13 79.0 82 47.6
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 3.7e-11 72.4 107 34.6
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 8.1e-11 71.2 55 63.6
MCO03G004 Micromonas commoda HOM05D006725 ORTHO05D008223 3.4e-09 65.9 122 30.3
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 2.9e-08 62.8 46 65.2
arahy.Tifrunner.gnm1.ann1.02S1KF Arachis hypogaea HOM05D003716 ORTHO05D010944 3.2e-07 59.3 36 72.2
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 3.2e-07 59.3 45 62.2
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 4.2e-07 58.9 46 60.9


User provided reference genes

Program Settings