Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0075181 Lupinus albus HOM05D000012 ORTHO05D237489 7.5e-32 139.8 66 100.0
arahy.Tifrunner.gnm1.ann1.AIAB9F Arachis hypogaea HOM05D000012 ORTHO05D000869 2.0e-08 62.0 30 93.3
arahy.Tifrunner.gnm1.ann1.DM09BN Arachis hypogaea HOM05D000012 ORTHO05D000869 2.0e-08 62.0 30 93.3
Ca_15181_v3 Cicer arietinum L. HOM05D000012 ORTHO05D000869 2.0e-08 62.0 31 90.3
Glyma.11G235200 Glycine max HOM05D000012 ORTHO05D000869 2.0e-08 62.0 31 90.3
Glyma.18G021700 Glycine max HOM05D000012 ORTHO05D000869 2.0e-08 62.0 31 90.3
Lj6g0017399 Lotus japonicus HOM05D000012 ORTHO05D000869 2.0e-08 62.0 31 90.3
Medtr3g072300 Medicago truncatula HOM05D000012 ORTHO05D000869 2.0e-08 62.0 31 90.3
Phvul.001G248600 Phaseolus vulgaris HOM05D000012 ORTHO05D000869 2.0e-08 62.0 31 90.3
Psat5g131680 Pisum sativum HOM05D000012 ORTHO05D000869 2.0e-08 62.0 31 90.3
TPR.G31618 Trifolium pratense HOM05D000012 ORTHO05D000869 2.0e-08 62.0 31 90.3
Lalb_Chr23g0277211 Lupinus albus HOM05D000012 ORTHO05D000869 5.8e-08 60.5 31 87.1
MD01G1162500 Malus domestica HOM05D000012 ORTHO05D000869 7.5e-08 60.1 31 83.9
MD07G1230600 Malus domestica HOM05D000012 ORTHO05D000869 7.5e-08 60.1 31 83.9
Prupe.2G260700 Prunus persica HOM05D000012 ORTHO05D000869 7.5e-08 60.1 31 83.9
CiPaw.01G304100 Carya illinoinensis HOM05D000012 ORTHO05D000869 9.8e-08 59.7 30 86.7
RcHm_v2.0_Chr1g0371561 Rosa chinensis HOM05D000012 ORTHO05D000869 1.3e-07 59.3 31 83.9
CSS0035268 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D000869 1.7e-07 58.9 30 83.3
CANSAT78G0726 Cannabis sativa HOM05D000012 ORTHO05D000869 1.7e-07 58.9 30 86.7
CiPaw.02G197700 Carya illinoinensis HOM05D000012 ORTHO05D000869 1.7e-07 58.9 30 83.3
Dinv10551 Davidia involucrata HOM05D000012 ORTHO05D000869 1.7e-07 58.9 31 77.4
Lj8A58G31 Lonicera japonica HOM05D000012 ORTHO05D000869 1.7e-07 58.9 31 80.6
VMungo1383G2846 Vigna mungo HOM05D000012 ORTHO05D000869 1.7e-07 58.9 31 83.9
COL.COLO4_08502 Corchorus olitorius HOM05D000012 ORTHO05D000869 2.2e-07 58.5 30 83.3
FvH4_7g25560 Fragaria vesca HOM05D000012 ORTHO05D000869 2.2e-07 58.5 49 61.2
FAN01G0268 Fragaria x ananassa HOM05D000012 ORTHO05D000869 2.2e-07 58.5 49 61.2
FAN06G1381 Fragaria x ananassa HOM05D000012 ORTHO05D000869 2.2e-07 58.5 49 61.2
FAN10G4232 Fragaria x ananassa HOM05D000012 ORTHO05D000869 2.2e-07 58.5 49 61.2
HanXRQChr07g0203591 Helianthus annuus HOM05D000012 ORTHO05D000869 2.2e-07 58.5 30 83.3
Cfa001231 Carpinus fangiana HOM05D000012 ORTHO05D000869 2.9e-07 58.2 30 83.3
Haze_17330 Corylus avellana HOM05D000012 ORTHO05D000869 2.9e-07 58.2 30 83.3
FAN03G3222 Fragaria x ananassa HOM05D000012 ORTHO05D000869 2.9e-07 58.2 49 59.2
Atru.chr12.146 Acer truncatum HOM05D000012 ORTHO05D000869 3.7e-07 57.8 35 77.1
Aa31LG5G19070 Aethionema arabicum HOM05D000012 ORTHO05D000869 3.7e-07 57.8 38 65.8
Aqoxy4G02142 Aquilegia oxysepala HOM05D000012 ORTHO05D000869 3.7e-07 57.8 30 83.3
BcaC01g05400 Brassica carinata HOM05D000012 ORTHO05D000869 3.7e-07 57.8 38 65.8
A03p22750 Brassica napus HOM05D000012 ORTHO05D000869 3.7e-07 57.8 38 65.8
C03p26990 Brassica napus HOM05D000012 ORTHO05D000869 3.7e-07 57.8 38 65.8
BolC3t15081H Brassica oleracea HOM05D000012 ORTHO05D000869 3.7e-07 57.8 38 65.8
BraA03t11499Z Brassica rapa HOM05D000012 ORTHO05D000869 3.7e-07 57.8 38 65.8
Cpa.g.sc19.94 Carica papaya HOM05D000012 ORTHO05D000869 3.7e-07 57.8 30 80.0
Dinv10553 Davidia involucrata HOM05D000012 ORTHO05D000869 3.7e-07 57.8 31 77.4
Actinidia29743 Actinidia chinensis HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 80.0
AL4G38300 Arabidopsis lyrata HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
AT2G40460 Arabidopsis thaliana HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
BcaB06g29144 Brassica carinata HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
BcaC02g07308 Brassica carinata HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
A04p30920 Brassica napus HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
C04p68300 Brassica napus HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
BraA04t18550Z Brassica rapa HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
Carub.0004s2271 Capsella rubella HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
ClCG07G004910 Citrullus lanatus HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
MELO3C034180.2 Cucumis melo HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
Duzib106G1149 Durio zibethinus HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
Duzib114G0836 Durio zibethinus HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
Eucgr.G03119 Eucalyptus grandis HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
Gohir.A06G176000 Gossypium hirsutum HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
Gohir.D06G185600 Gossypium hirsutum HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
Gorai.010G217200 Gossypium raimondii HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
PSO017G6904 Papaver somniferum HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
PSO170G2520 Papaver somniferum HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
PGR142G3719 Punica granatum HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
QL08p064391 Quercus lobata HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
Sp4g22800 Schrenkiella parvula HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
Thecc.10G174500 Theobroma cacao HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
TWI73G1156 Tripterygium wilfordii HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 80.0
TAR629G3164 Trochodendron aralioides HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
TAR636G3179 Trochodendron aralioides HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
GSVIVG01032716001 Vitis vinifera HOM05D000012 ORTHO05D000869 4.9e-07 57.4 30 83.3
ECA238G3286 Erigeron canadensis HOM05D000012 ORTHO05D000869 6.4e-07 57.0 48 58.3
Glyma.02G259400 Glycine max HOM05D000012 ORTHO05D000869 6.4e-07 57.0 31 80.6
Hma1.2p1_1240F.1_g269570 Hydrangea macrophylla HOM05D000012 ORTHO05D000869 8.3e-07 56.6 30 80.0
THA.LOC104808266 Tarenaya hassleriana HOM05D000012 ORTHO05D000869 8.3e-07 56.6 30 80.0
CARHR135570 Cardamine hirsuta HOM05D000012 ORTHO05D000869 1.1e-06 56.2 30 80.0
Ciclev10031051m.g Citrus clementina HOM05D000012 ORTHO05D000869 1.1e-06 56.2 30 80.0
CsaV3_5G010820 Cucumis sativus L. HOM05D000012 ORTHO05D000869 1.1e-06 56.2 30 76.7
Thhalv10016426m.g Eutrema salsugineum HOM05D000012 ORTHO05D000869 1.1e-06 56.2 30 80.0
Gohir.A10G181200 Gossypium hirsutum HOM05D000012 ORTHO05D000869 1.1e-06 56.2 30 80.0
Gohir.D10G188100 Gossypium hirsutum HOM05D000012 ORTHO05D000869 1.1e-06 56.2 30 80.0
Gorai.011G210900 Gossypium raimondii HOM05D000012 ORTHO05D000869 1.1e-06 56.2 30 80.0
Lsat_1_v5_gn_2_126100 Lactuca sativa HOM05D000012 ORTHO05D000869 1.1e-06 56.2 48 58.3
Nn2g13330 Nelumbo nucifera HOM05D000012 ORTHO05D000869 1.1e-06 56.2 30 80.0
Sed0011980 Sechium edule HOM05D000012 ORTHO05D000869 1.1e-06 56.2 30 80.0
Hund15844 Selenicereus undatus HOM05D000012 ORTHO05D000869 1.1e-06 56.2 32 78.1
THA.LOC104808265 Tarenaya hassleriana HOM05D000012 ORTHO05D000869 1.1e-06 56.2 30 80.0
MSTRG.27285 Avicennia marina HOM05D000012 ORTHO05D000869 1.4e-06 55.8 31 77.4
BcaC02g12716 Brassica carinata HOM05D000012 ORTHO05D000869 1.4e-06 55.8 38 65.8
Cc02_g05650 Coffea canephora HOM05D000012 ORTHO05D000869 1.9e-06 55.5 31 77.4
DCAR_028541 Daucus carota HOM05D000012 ORTHO05D000869 1.9e-06 55.5 30 76.7
Nn2g11094 Nelumbo nucifera HOM05D000012 ORTHO05D000869 1.9e-06 55.5 30 76.7
Oeu017762.1 Olea europaea HOM05D000012 ORTHO05D000869 1.9e-06 55.5 30 80.0
Rhsim03G0150100 Rhododendron simsii HOM05D000012 ORTHO05D000869 1.9e-06 55.5 31 77.4
Migut.F00583 Erythranthe guttata HOM05D000012 ORTHO05D000869 2.4e-06 55.1 49 57.1
vmacro06927 Vaccinium macrocarpon HOM05D000012 ORTHO05D000869 2.4e-06 55.1 31 77.4
HPP92_003705 Vanilla planifolia HOM05D000012 ORTHO05D000869 2.4e-06 55.1 32 71.9
EL10Ac2g04275 Beta vulgaris HOM05D000012 ORTHO05D000869 3.2e-06 54.7 30 76.7
SalBow3G4372 Salvia bowleyana HOM05D000012 ORTHO05D000869 3.2e-06 54.7 49 55.1
TAR633G2133 Trochodendron aralioides HOM05D000012 ORTHO05D000869 3.2e-06 54.7 30 80.0
ATR0586G002 Amborella trichopoda HOM05D000012 ORTHO05D000869 4.1e-06 54.3 32 71.9
AUR62022986 Chenopodium quinoa HOM05D000012 ORTHO05D000869 5.4e-06 53.9 30 76.7
Sabra19G0071100 Salix brachista HOM05D000012 ORTHO05D000869 5.4e-06 53.9 30 80.0
Sc11g0005690 Simmondsia chinensis HOM05D000012 ORTHO05D000869 5.4e-06 53.9 30 73.3
Ah.16g104140 Amaranthus hybridus HOM05D000012 ORTHO05D000869 7.0e-06 53.5 53 54.7
BcaB01g03540 Brassica carinata HOM05D000012 ORTHO05D000869 7.0e-06 53.5 38 60.5
C04p01990 Brassica napus HOM05D000012 ORTHO05D000869 7.0e-06 53.5 38 63.2
BolC4t21849H Brassica oleracea HOM05D000012 ORTHO05D000869 7.0e-06 53.5 38 63.2
SGA_v2.0_scaffold60G20922 Striga asiatica HOM05D000012 ORTHO05D000869 7.0e-06 53.5 31 67.7
Manes.07G138700 Manihot esculenta HOM05D000012 ORTHO05D000869 9.2e-06 53.1 30 76.7
Manes.10G005900 Manihot esculenta HOM05D000012 ORTHO05D000869 9.2e-06 53.1 30 76.7
Oeu058664.1 Olea europaea HOM05D000012 ORTHO05D000869 9.2e-06 53.1 30 76.7


User provided reference genes

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