Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 9.4e-46 186.4 89 100.0
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 5.9e-32 140.6 93 69.9
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 3.8e-31 137.9 89 66.3
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 5.0e-31 137.5 89 65.2
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 1.9e-30 135.6 89 67.4
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 3.2e-30 134.8 89 67.4
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 4.2e-30 134.4 85 67.1
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 1.2e-29 132.9 89 65.2
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 2.1e-29 132.1 89 64.0
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 2.7e-29 131.7 93 65.6
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 2.7e-29 131.7 88 67.0
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 4.7e-29 131.0 88 63.6
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 4.7e-29 131.0 88 64.8
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 4.7e-29 131.0 89 62.9
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 4.7e-29 131.0 92 63.0
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 6.1e-29 130.6 89 64.0
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 8.0e-29 130.2 93 62.4
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 8.0e-29 130.2 88 59.1
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 1.0e-28 129.8 88 63.6
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 1.4e-28 129.4 89 64.0
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 1.4e-28 129.4 89 64.0
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 1.4e-28 129.4 88 64.8
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 1.4e-28 129.4 92 58.7
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 1.8e-28 129.0 89 60.7
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 3.0e-28 128.3 92 62.0
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 4.0e-28 127.9 89 61.8
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 4.0e-28 127.9 89 62.9
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 4.0e-28 127.9 88 58.0
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 4.0e-28 127.9 87 64.4
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 4.0e-28 127.9 89 64.0
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 5.2e-28 127.5 82 64.6
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 5.2e-28 127.5 89 62.9
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 5.2e-28 127.5 86 64.0
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 6.7e-28 127.1 85 67.1
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 6.7e-28 127.1 89 62.9
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 8.8e-28 126.7 89 61.8
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 8.8e-28 126.7 89 60.7
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.2e-27 126.3 85 64.7
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.2e-27 126.3 85 64.7
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.2e-27 126.3 85 64.7
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 1.5e-27 125.9 88 61.4
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 1.5e-27 125.9 89 64.0
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 1.5e-27 125.9 89 64.0
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 2.0e-27 125.6 88 62.5
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 2.0e-27 125.6 89 62.9
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 2.6e-27 125.2 88 61.4
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 2.6e-27 125.2 87 60.9
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 2.6e-27 125.2 89 60.7
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 2.6e-27 125.2 89 62.9
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 3.3e-27 124.8 89 62.9
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 3.3e-27 124.8 88 63.6
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 3.3e-27 124.8 88 56.8
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 4.4e-27 124.4 88 63.6
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 4.4e-27 124.4 89 60.7
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 5.7e-27 124.0 84 64.3
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 5.7e-27 124.0 84 64.3
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 5.7e-27 124.0 89 61.8
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 5.7e-27 124.0 88 61.4
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 7.5e-27 123.6 89 59.6
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 7.5e-27 123.6 87 59.8
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 7.5e-27 123.6 88 62.5
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 9.7e-27 123.2 92 62.0
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 9.7e-27 123.2 88 61.4
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 1.3e-26 122.9 88 60.2
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 61.4
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 61.4
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 1.7e-26 122.5 89 59.6
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 1.7e-26 122.5 89 59.6
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 1.7e-26 122.5 89 59.6
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 1.7e-26 122.5 89 59.6
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 58.0
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 2.2e-26 122.1 85 63.5
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 2.8e-26 121.7 86 62.8
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.8e-26 121.7 88 61.4
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 2.8e-26 121.7 85 62.4
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 2.8e-26 121.7 87 57.5
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.7e-26 121.3 85 62.4
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 3.7e-26 121.3 88 60.2
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 4.8e-26 120.9 89 61.8
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 6.3e-26 120.6 85 63.5
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 8.3e-26 120.2 92 57.6
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 8.3e-26 120.2 89 59.6
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 1.1e-25 119.8 89 58.4
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 1.1e-25 119.8 89 58.4
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 1.8e-25 119.0 89 60.7
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 3.1e-25 118.2 89 59.6
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 4.1e-25 117.9 80 61.2
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 4.1e-25 117.9 80 61.2
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 4.1e-25 117.9 84 61.9
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 5.3e-25 117.5 89 57.3
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 1.2e-24 116.3 93 55.9
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 2.7e-24 115.2 85 56.5
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.5e-24 114.8 89 57.3
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 5.9e-24 114.0 89 57.3
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 1.7e-23 112.5 89 56.2
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 2.9e-23 111.7 89 58.4
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 8.5e-23 110.2 89 55.1
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 8.5e-23 110.2 89 55.1
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 1.5e-22 109.4 89 57.3
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 1.5e-22 109.4 89 57.3
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 1.5e-22 109.4 89 57.3
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 1.5e-22 109.4 89 57.3
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 1.5e-22 109.4 89 57.3
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 3.2e-22 108.2 89 57.3
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 3.2e-22 108.2 89 55.1
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 9.4e-22 106.7 89 56.2
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 1.2e-21 106.3 89 56.2
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 1.6e-21 105.9 89 56.2
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 2.7e-21 105.1 89 56.2
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 2.7e-21 105.1 89 56.2
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 2.7e-21 105.1 89 56.2
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 2.7e-21 105.1 89 56.2
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 2.7e-21 105.1 89 56.2
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 3.6e-21 104.8 89 55.1
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 4.7e-21 104.4 88 54.5
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 4.7e-21 104.4 89 53.9
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 1.2e-19 99.8 90 52.2
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 1.3e-18 96.3 89 48.3
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 2.2e-18 95.5 83 49.4
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.6e-16 89.4 60 63.3
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 2.9e-15 85.1 64 53.1
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 5.0e-15 84.3 75 50.7
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 8.6e-15 83.6 72 51.4
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 1.6e-13 79.3 61 55.7
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 2.1e-13 79.0 57 61.4
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 1.0e-12 76.6 83 41.0
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 1.8e-12 75.9 60 50.0
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 9.8e-11 70.1 57 49.1
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 4.9e-10 67.8 58 53.4
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 2.4e-09 65.5 57 52.6
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 1.6e-08 62.8 56 50.0
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 4.5e-08 61.2 78 41.0
AagrBONN_evm.TU.Sc2ySwM_228.1937 Anthoceros agrestis HOM05D004945 ORTHO05D005536 1.0e-07 60.1 78 35.9
MCO09G227 Micromonas commoda HOM05D004945 ORTHO05D005536 1.0e-07 60.1 74 35.1
Pp3c25_5460 Physcomitrium patens HOM05D004945 ORTHO05D005536 2.3e-07 58.9 85 38.8
Pp3c25_5480 Physcomitrium patens HOM05D004945 ORTHO05D005536 2.3e-07 58.9 85 38.8
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 6.6e-07 57.4 42 54.8
Pp3c5_15280 Physcomitrium patens HOM05D004945 ORTHO05D005536 6.6e-07 57.4 83 31.3
Pp3c5_15650 Physcomitrium patens HOM05D004945 ORTHO05D005536 1.5e-06 56.2 85 37.6
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 4.3e-06 54.7 45 48.9


User provided reference genes

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