Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0074531 Lupinus albus HOM05D004042 ORTHO05D004552 3.9e-26 120.6 55 100.0
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 6.9e-23 109.8 51 96.1
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 2.0e-22 108.2 51 94.1
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 5.8e-22 106.7 51 92.2
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 1.3e-21 105.5 51 90.2
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 2.2e-21 104.8 51 94.1
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 4.9e-21 103.6 53 86.8
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 4.9e-21 103.6 53 88.7
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 4.9e-21 103.6 50 92.0
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 6.5e-21 103.2 51 88.2
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 8.4e-21 102.8 51 92.2
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 1.1e-20 102.4 53 86.8
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 1.1e-20 102.4 53 86.8
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 1.9e-20 101.7 49 91.8
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 3.2e-20 100.9 53 84.9
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 4.2e-20 100.5 51 88.2
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 5.5e-20 100.1 53 83.0
Cpa.g.sc737.2 Carica papaya HOM05D004042 ORTHO05D004552 9.3e-20 99.4 53 83.0
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 9.3e-20 99.4 49 89.8
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 1.2e-19 99.0 51 86.3
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 3.5e-19 97.4 50 88.0
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 3.5e-19 97.4 50 88.0
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 3.5e-19 97.4 49 85.7
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 4.6e-19 97.1 49 87.8
Glyma.15G171700 Glycine max HOM05D004042 ORTHO05D004552 7.9e-19 96.3 48 91.7
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 1.0e-18 95.9 51 76.5
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 1.0e-18 95.9 50 86.0
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 1.3e-18 95.5 51 78.4
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 1.8e-18 95.1 51 80.4
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 1.8e-18 95.1 47 89.4
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 1.8e-18 95.1 49 85.7
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 2.3e-18 94.7 50 82.0
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 3.0e-18 94.4 51 84.3
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 3.0e-18 94.4 51 80.4
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 3.0e-18 94.4 48 81.2
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 3.9e-18 94.0 51 82.4
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 5.1e-18 93.6 50 80.0
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 5.1e-18 93.6 48 85.4
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 5.1e-18 93.6 48 85.4
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 5.1e-18 93.6 48 85.4
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 6.7e-18 93.2 53 73.6
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 8.7e-18 92.8 50 84.0
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 8.7e-18 92.8 48 87.5
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 1.1e-17 92.4 49 85.7
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 1.1e-17 92.4 51 78.4
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 1.1e-17 92.4 48 85.4
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 1.5e-17 92.0 51 82.4
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 1.5e-17 92.0 51 82.4
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 1.9e-17 91.7 49 85.7
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 1.9e-17 91.7 50 78.0
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 1.9e-17 91.7 53 71.7
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 1.9e-17 91.7 53 71.7
PGSC0003DMG400032789 Solanum tuberosum HOM05D004042 ORTHO05D004552 1.9e-17 91.7 53 71.7
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 2.5e-17 91.3 49 85.7
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 2.5e-17 91.3 49 85.7
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 2.5e-17 91.3 53 73.6
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 3.3e-17 90.9 48 83.3
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 4.3e-17 90.5 48 79.2
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 4.3e-17 90.5 51 80.4
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 4.3e-17 90.5 51 80.4
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 4.3e-17 90.5 51 80.4
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 4.3e-17 90.5 51 80.4
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 4.3e-17 90.5 51 80.4
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 4.3e-17 90.5 49 83.7
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.3e-17 90.5 49 83.7
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.3e-17 90.5 49 83.7
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.3e-17 90.5 49 83.7
FAN28G2747 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.3e-17 90.5 49 83.7
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 4.3e-17 90.5 49 83.7
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 4.3e-17 90.5 49 83.7
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 4.3e-17 90.5 47 85.1
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 5.7e-17 90.1 49 83.7
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 5.7e-17 90.1 49 83.7
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 7.4e-17 89.7 51 80.4
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 7.4e-17 89.7 51 80.4
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 7.4e-17 89.7 51 80.4
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 9.6e-17 89.4 48 79.2
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 9.6e-17 89.4 49 83.7
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 9.6e-17 89.4 48 81.2
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 1.3e-16 89.0 49 83.7
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 1.3e-16 89.0 51 78.4
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 2.1e-16 88.2 51 78.4
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 2.1e-16 88.2 51 78.4
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 2.1e-16 88.2 51 78.4
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 2.1e-16 88.2 51 78.4
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 2.1e-16 88.2 51 78.4
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 2.1e-16 88.2 48 81.2
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 2.1e-16 88.2 53 73.6
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 2.8e-16 87.8 53 69.8
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 2.8e-16 87.8 53 69.8
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 2.8e-16 87.8 48 77.1
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 2.8e-16 87.8 48 77.1
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 2.8e-16 87.8 48 77.1
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 3.7e-16 87.4 47 83.0
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 3.7e-16 87.4 48 79.2
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 4.8e-16 87.0 48 75.0
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 6.2e-16 86.7 48 77.1
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 8.2e-16 86.3 50 72.0
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 8.2e-16 86.3 53 67.9
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 8.2e-16 86.3 48 72.9
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 1.1e-15 85.9 48 77.1
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 1.1e-15 85.9 48 70.8
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 1.4e-15 85.5 48 77.1
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 1.4e-15 85.5 49 71.4
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 1.4e-15 85.5 49 71.4
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 1.4e-15 85.5 49 71.4
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 1.8e-15 85.1 48 75.0
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 3.1e-15 84.3 48 75.0
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 3.1e-15 84.3 48 75.0
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 5.3e-15 83.6 49 67.3
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 5.3e-15 83.6 48 75.0
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 5.3e-15 83.6 48 68.8
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 5.3e-15 83.6 47 70.2
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 9.0e-15 82.8 48 72.9
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 9.0e-15 82.8 47 76.6
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 1.2e-14 82.4 48 72.9
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 1.2e-14 82.4 48 70.8
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 1.2e-14 82.4 48 72.9
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 1.5e-14 82.0 48 72.9
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 4.5e-14 80.5 48 64.6
SMO361G0462 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 5.8e-14 80.1 48 72.9
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.3e-13 79.0 46 69.6
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 2.2e-13 78.2 46 67.4
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 4.2e-12 73.9 59 59.3
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 3.5e-11 70.9 50 62.0
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 8.7e-10 66.2 35 80.0
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 5.7e-09 63.5 35 77.1
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 1.6e-08 62.0 36 66.7
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 8.2e-08 59.7 43 55.8
Cre01.g045903 Chlamydomonas reinhardtii HOM05D004042 ORTHO05D004552 1.1e-07 59.3 43 55.8
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 1.4e-07 58.9 30 83.3


User provided reference genes

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