Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0073901 Lupinus albus HOM05D000036 ORTHO05D016457 2.3e-57 225.3 112 100.0
Lalb_Chr11g0073831 Lupinus albus HOM05D000036 ORTHO05D000095 4.8e-39 164.5 100 80.0
Lalb_Chr11g0073841 Lupinus albus HOM05D000036 ORTHO05D000095 2.4e-38 162.2 100 80.0
Lalb_Chr11g0073881 Lupinus albus HOM05D000036 ORTHO05D016457 2.4e-38 162.2 106 73.6
Lalb_Chr08g0232911 Lupinus albus HOM05D000036 ORTHO05D000095 9.7e-16 87.0 111 49.5
arahy.Tifrunner.gnm1.ann1.HK8QN4 Arachis hypogaea HOM05D000036 ORTHO05D000095 2.5e-11 72.4 103 41.7
Phvul.009G222100 Phaseolus vulgaris HOM05D000036 ORTHO05D000095 9.4e-11 70.5 106 43.4
arahy.Tifrunner.gnm1.ann1.IFFV7U Arachis hypogaea HOM05D000036 ORTHO05D000095 1.2e-10 70.1 103 38.8
Glyma.09G077100 Glycine max HOM05D000036 ORTHO05D000095 1.6e-10 69.7 106 39.6
Lalb_Chr08g0232921 Lupinus albus HOM05D000036 ORTHO05D000095 2.7e-10 68.9 104 42.3
Psat1g139160 Pisum sativum HOM05D000036 ORTHO05D000095 1.0e-09 67.0 109 38.5
Medtr4g087970 Medicago truncatula HOM05D000036 ORTHO05D000095 2.3e-09 65.9 101 37.6
VMungo1309G1894 Vigna mungo HOM05D000036 ORTHO05D000095 3.0e-09 65.5 103 38.8
Glyma.15G184400 Glycine max HOM05D000036 ORTHO05D000095 4.0e-09 65.1 106 42.5
Ca_21347_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000095 8.8e-09 63.9 96 38.5
Ca_29805_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000095 8.8e-09 63.9 96 38.5
Lj6g0016820 Lotus japonicus HOM05D000036 ORTHO05D000095 1.2e-08 63.5 86 41.9
Lalb_Chr13g0299141 Lupinus albus HOM05D000036 ORTHO05D000095 1.2e-08 63.5 104 39.4
Ca_13960_v3 Cicer arietinum L. HOM05D000036 ORTHO05D016457 3.4e-08 62.0 85 37.6
Glyma.15G184300 Glycine max HOM05D000036 ORTHO05D000095 4.4e-08 61.6 78 46.2
TPR.G27245 Trifolium pratense HOM05D000036 ORTHO05D000095 4.4e-08 61.6 76 43.4
TPR.G14553 Trifolium pratense HOM05D000036 ORTHO05D000095 5.7e-08 61.2 103 36.9
Dinv25496 Davidia involucrata HOM05D000036 ORTHO05D000095 1.3e-07 60.1 96 35.4
COL.COLO4_21186 Corchorus olitorius HOM05D000036 ORTHO05D000095 2.2e-07 59.3 101 34.7
Psat0s1781g0040 Pisum sativum HOM05D000036 ORTHO05D000095 2.2e-07 59.3 109 35.8
QL11p003386 Quercus lobata HOM05D000036 ORTHO05D000095 2.8e-07 58.9 88 37.5
Cc00_g13750 Coffea canephora HOM05D000036 ORTHO05D000095 4.8e-07 58.2 63 47.6
Lj4g0015533 Lotus japonicus HOM05D000036 ORTHO05D000095 4.8e-07 58.2 99 34.3
Thecc.09G068500 Theobroma cacao HOM05D000036 ORTHO05D000095 8.3e-07 57.4 96 35.4
Manes.03G054300 Manihot esculenta HOM05D000036 ORTHO05D000095 1.1e-06 57.0 102 32.4
arahy.Tifrunner.gnm1.ann1.18DWCY Arachis hypogaea HOM05D000036 ORTHO05D000095 1.8e-06 56.2 79 40.5
FAN19G0660 Fragaria x ananassa HOM05D000036 ORTHO05D000095 1.8e-06 56.2 100 35.0
CANSAT40G0001 Cannabis sativa HOM05D000036 ORTHO05D000095 2.4e-06 55.8 81 38.3
Lalb_Chr12g0200371 Lupinus albus HOM05D000036 ORTHO05D000095 2.4e-06 55.8 106 39.6
Psat0s1781g0160 Pisum sativum HOM05D000036 ORTHO05D000095 2.4e-06 55.8 102 36.3
arahy.Tifrunner.gnm1.ann1.GBY2EB Arachis hypogaea HOM05D000036 ORTHO05D000923 7.0e-06 54.3 78 37.2
Ca_02298_v3 Cicer arietinum L. HOM05D000036 ORTHO05D028849 7.0e-06 54.3 76 43.4
Cc00_g13760 Coffea canephora HOM05D000036 ORTHO05D000095 7.0e-06 54.3 70 41.4
FvH4_1g09610 Fragaria vesca HOM05D000036 ORTHO05D000095 7.0e-06 54.3 100 34.0
FAN26G2413 Fragaria x ananassa HOM05D000036 ORTHO05D000095 7.0e-06 54.3 100 34.0
FAN26G2972 Fragaria x ananassa HOM05D000036 ORTHO05D000095 7.0e-06 54.3 100 34.0
FAN28G1544 Fragaria x ananassa HOM05D000036 ORTHO05D000095 7.0e-06 54.3 100 33.0
TWI32G0294 Tripterygium wilfordii HOM05D000036 ORTHO05D000095 7.0e-06 54.3 100 36.0
Aa31sc386G20 Aethionema arabicum HOM05D000036 ORTHO05D016457 9.1e-06 53.9 98 35.7
Ciclev10007993m.g Citrus clementina HOM05D000036 ORTHO05D000095 9.1e-06 53.9 104 35.6
Duzib168G0496 Durio zibethinus HOM05D000036 ORTHO05D000095 9.1e-06 53.9 99 34.3
Medtr2g044880 Medicago truncatula HOM05D000036 ORTHO05D000095 9.1e-06 53.9 90 34.4


User provided reference genes

Program Settings