Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0073761 Lupinus albus HOM05D004817 ORTHO05D005790 1.9e-36 155.2 74 100.0
Lalb_Chr23g0276121 Lupinus albus HOM05D004817 ORTHO05D005790 5.6e-28 127.1 73 83.6
Lalb_Chr08g0232961 Lupinus albus HOM05D004817 ORTHO05D005790 1.6e-27 125.6 73 82.2
Glyma.09G077700 Glycine max HOM05D004817 ORTHO05D005790 2.6e-25 118.2 72 77.8
Phvul.009G221600 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 9.9e-25 116.3 71 76.1
Glyma.15G185200 Glycine max HOM05D004817 ORTHO05D005790 2.9e-24 114.8 73 78.1
Psat1g016600 Pisum sativum HOM05D004817 ORTHO05D005790 2.9e-24 114.8 71 74.6
Glyma.13G117300 Glycine max HOM05D004817 ORTHO05D005790 6.4e-24 113.6 73 76.7
Phvul.003G124400 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 1.1e-23 112.8 71 76.1
CiPaw.01G127200 Carya illinoinensis HOM05D004817 ORTHO05D005790 4.2e-23 110.9 72 76.4
Ca_02320_v3 Cicer arietinum L. HOM05D004817 ORTHO05D005790 5.4e-23 110.5 72 72.2
Lj2g0017510 Lotus japonicus HOM05D004817 ORTHO05D005790 7.1e-23 110.2 73 71.2
QL06p014718 Quercus lobata HOM05D004817 ORTHO05D005790 9.3e-23 109.8 71 74.6
TPR.G29237 Trifolium pratense HOM05D004817 ORTHO05D005790 9.3e-23 109.8 71 73.2
Medtr2g044940 Medicago truncatula HOM05D004817 ORTHO05D005790 1.2e-22 109.4 72 72.2
COL.COLO4_25048 Corchorus olitorius HOM05D004817 ORTHO05D005790 7.8e-22 106.7 72 76.4
Glyma.17G042600 Glycine max HOM05D004817 ORTHO05D005790 7.8e-22 106.7 72 73.6
Lalb_Chr07g0181551 Lupinus albus HOM05D004817 ORTHO05D005790 1.7e-21 105.5 73 69.9
Gohir.D01G023700 Gossypium hirsutum HOM05D004817 ORTHO05D005790 2.3e-21 105.1 69 76.8
Gorai.002G032200 Gossypium raimondii HOM05D004817 ORTHO05D005790 2.3e-21 105.1 69 76.8
Lj4g0003186 Lotus japonicus HOM05D004817 ORTHO05D005790 3.0e-21 104.8 73 68.5
TPR.G12580 Trifolium pratense HOM05D004817 ORTHO05D005790 3.9e-21 104.4 73 68.5
Cfa015752 Carpinus fangiana HOM05D004817 ORTHO05D005790 6.6e-21 103.6 74 73.0
Lj6g0012255 Lotus japonicus HOM05D004817 ORTHO05D005790 6.6e-21 103.6 74 70.3
Manes.03G213500 Manihot esculenta HOM05D004817 ORTHO05D005790 6.6e-21 103.6 71 73.2
Lalb_Chr12g0200501 Lupinus albus HOM05D004817 ORTHO05D005790 8.7e-21 103.2 72 68.1
Prupe.1G208000 Prunus persica HOM05D004817 ORTHO05D005790 8.7e-21 103.2 71 70.4
Gohir.A01G036400 Gossypium hirsutum HOM05D004817 ORTHO05D005790 1.1e-20 102.8 69 75.4
MD13G1137200 Malus domestica HOM05D004817 ORTHO05D005790 1.9e-20 102.1 74 71.6
Aqoxy5G02845 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 5.6e-20 100.5 69 69.6
Psat4g020640 Pisum sativum HOM05D004817 ORTHO05D005790 5.6e-20 100.5 65 72.3
Atru.chr4.3187 Acer truncatum HOM05D004817 ORTHO05D005790 7.3e-20 100.1 78 66.7
arahy.Tifrunner.gnm1.ann1.XTK2NM Arachis hypogaea HOM05D004817 ORTHO05D005790 7.3e-20 100.1 75 70.7
Eucgr.B02200 Eucalyptus grandis HOM05D004817 ORTHO05D005790 1.3e-19 99.4 72 72.2
Nn4g25286 Nelumbo nucifera HOM05D004817 ORTHO05D005790 1.6e-19 99.0 70 71.4
Dinv24730 Davidia involucrata HOM05D004817 ORTHO05D005790 2.1e-19 98.6 71 71.8
arahy.Tifrunner.gnm1.ann1.E7NGHZ Arachis hypogaea HOM05D004817 ORTHO05D005790 2.8e-19 98.2 75 69.3
Ciclev10007149m.g Citrus clementina HOM05D004817 ORTHO05D005790 2.8e-19 98.2 75 65.3
Medtr4g124250 Medicago truncatula HOM05D004817 ORTHO05D005790 3.6e-19 97.8 74 67.6
EL10Ac3g06222 Beta vulgaris HOM05D004817 ORTHO05D005790 6.2e-19 97.1 76 65.8
Duzib151G1168 Durio zibethinus HOM05D004817 ORTHO05D005790 6.2e-19 97.1 69 71.0
MD16G1133100 Malus domestica HOM05D004817 ORTHO05D005790 1.1e-18 96.3 74 66.2
Lalb_Chr13g0299061 Lupinus albus HOM05D004817 ORTHO05D005790 1.8e-18 95.5 68 69.1
RcHm_v2.0_Chr4g0427991 Rosa chinensis HOM05D004817 ORTHO05D005790 1.8e-18 95.5 74 67.6
CANSAT25G3847 Cannabis sativa HOM05D004817 ORTHO05D005790 2.4e-18 95.1 80 62.5
GSVIVG01017708001 Vitis vinifera HOM05D004817 ORTHO05D005790 2.4e-18 95.1 72 70.8
Potri.010G004000 Populus trichocarpa HOM05D004817 ORTHO05D005790 1.2e-17 92.8 72 61.1
PGR004G2302 Punica granatum HOM05D004817 ORTHO05D005790 1.2e-17 92.8 80 60.0
Hund12264 Selenicereus undatus HOM05D004817 ORTHO05D005790 1.2e-17 92.8 76 67.1
Nitab4.5_0000745g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 1.5e-17 92.4 66 72.7
Nitab4.5_0001769g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 1.5e-17 92.4 68 67.6
SalBow6G6449 Salvia bowleyana HOM05D004817 ORTHO05D005790 1.5e-17 92.4 72 59.7
FvH4_4g21760 Fragaria vesca HOM05D004817 ORTHO05D005790 2.6e-17 91.7 74 66.2
FAN07G2633 Fragaria x ananassa HOM05D004817 ORTHO05D005790 2.6e-17 91.7 74 66.2
FAN12G2725 Fragaria x ananassa HOM05D004817 ORTHO05D005790 4.5e-17 90.9 74 66.2
FAN17G1578 Fragaria x ananassa HOM05D004817 ORTHO05D005790 4.5e-17 90.9 74 66.2
PGR031G2777 Punica granatum HOM05D004817 ORTHO05D005790 4.5e-17 90.9 76 65.8
Thecc.04G314800 Theobroma cacao HOM05D004817 ORTHO05D005790 4.5e-17 90.9 78 62.8
Migut.J01631 Erythranthe guttata HOM05D004817 ORTHO05D005790 7.6e-17 90.1 70 61.4
unitig_746.g26894 Utricularia gibba HOM05D004817 ORTHO05D005790 1.3e-16 89.4 68 61.8
Cpa.g.sc146.7 Carica papaya HOM05D004817 ORTHO05D005790 1.7e-16 89.0 84 57.1
Aqoxy2G02458 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 2.2e-16 88.6 74 59.5
Cc03_g00010 Coffea canephora HOM05D004817 ORTHO05D005790 2.9e-16 88.2 70 64.3
arahy.Tifrunner.gnm1.ann1.WNQ9XL Arachis hypogaea HOM05D004817 ORTHO05D005790 4.9e-16 87.4 82 58.5
Eucgr.H04140 Eucalyptus grandis HOM05D004817 ORTHO05D005790 1.1e-15 86.3 70 65.7
Sabra10G0003400 Salix brachista HOM05D004817 ORTHO05D005790 1.1e-15 86.3 73 58.9
Oeu002212.1 Olea europaea HOM05D004817 ORTHO05D005790 2.4e-15 85.1 65 69.2
Sed0022538 Sechium edule HOM05D004817 ORTHO05D005790 3.2e-15 84.7 82 56.1
Oeu022716.1 Olea europaea HOM05D004817 ORTHO05D005790 4.2e-15 84.3 65 63.1
arahy.Tifrunner.gnm1.ann1.V5CRDX Arachis hypogaea HOM05D004817 ORTHO05D005790 5.4e-15 84.0 84 56.0
CAN.G305.33 Capsicum annuum HOM05D004817 ORTHO05D005790 9.3e-15 83.2 69 65.2
PGSC0003DMG400027147 Solanum tuberosum HOM05D004817 ORTHO05D005790 9.3e-15 83.2 69 65.2
Solyc05g053180.3 Solanum lycopersicum HOM05D004817 ORTHO05D005790 1.2e-14 82.8 69 65.2
Sopen05g031690 Solanum pennellii HOM05D004817 ORTHO05D005790 1.2e-14 82.8 69 65.2
Peaxi162Scf00323g00924 Petunia axillaris HOM05D004817 ORTHO05D005790 2.1e-14 82.0 64 62.5
unitig_744.g24175 Utricularia gibba HOM05D004817 ORTHO05D005790 2.1e-14 82.0 72 50.0
TAR362G1300 Trochodendron aralioides HOM05D004817 ORTHO05D005790 3.5e-14 81.3 73 58.9
MBI18_g46513_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 4.6e-14 80.9 72 58.3
Sopen12g033630 Solanum pennellii HOM05D004817 ORTHO05D005790 4.6e-14 80.9 67 62.7
Sed0023994 Sechium edule HOM05D004817 ORTHO05D005790 6.0e-14 80.5 82 56.1
MBI18_g40079_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 1.0e-13 79.7 72 59.7
Solyc12g098880.2 Solanum lycopersicum HOM05D004817 ORTHO05D005790 1.0e-13 79.7 66 62.1
ClCG05G006950 Citrullus lanatus HOM05D004817 ORTHO05D005790 1.8e-13 79.0 82 52.4
DCAR_023420 Daucus carota HOM05D004817 ORTHO05D005790 1.8e-13 79.0 80 56.2
PGSC0003DMG400004597 Solanum tuberosum HOM05D004817 ORTHO05D005790 2.3e-13 78.6 64 62.5
unitig_21.g20684 Utricularia gibba HOM05D004817 ORTHO05D005790 5.1e-13 77.4 70 51.4
CARHR037950 Cardamine hirsuta HOM05D004817 ORTHO05D005790 6.7e-13 77.0 78 55.1
DCAR_026926 Daucus carota HOM05D004817 ORTHO05D005790 6.7e-13 77.0 81 51.9
A05p21090 Brassica napus HOM05D004817 ORTHO05D005790 1.1e-12 76.3 78 55.1
BolC5t32277H Brassica oleracea HOM05D004817 ORTHO05D005790 1.1e-12 76.3 78 55.1
BraA05t21012Z Brassica rapa HOM05D004817 ORTHO05D005790 1.1e-12 76.3 78 55.1
Thhalv10011909m.g Eutrema salsugineum HOM05D004817 ORTHO05D005790 1.1e-12 76.3 78 55.1
Nitab4.5_0000978g0020 Nicotiana tabacum HOM05D004817 ORTHO05D005790 1.1e-12 76.3 65 66.2
THA.LOC104821815 Tarenaya hassleriana HOM05D004817 ORTHO05D005790 1.1e-12 76.3 72 52.8
AT1G48330 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 1.9e-12 75.5 76 53.9
BcaC05g27577 Brassica carinata HOM05D004817 ORTHO05D005790 1.9e-12 75.5 71 56.3
BcaC07g37143 Brassica carinata HOM05D004817 ORTHO05D005790 1.9e-12 75.5 78 53.8
A08p04790 Brassica napus HOM05D004817 ORTHO05D005790 1.9e-12 75.5 78 53.8
C05p35610 Brassica napus HOM05D004817 ORTHO05D005790 1.9e-12 75.5 71 56.3
BraA08t32509Z Brassica rapa HOM05D004817 ORTHO05D005790 1.9e-12 75.5 78 53.8
AL1G54940 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 2.5e-12 75.1 78 53.8
BcaB04g17438 Brassica carinata HOM05D004817 ORTHO05D005790 2.5e-12 75.1 78 53.8
BcaB07g33764 Brassica carinata HOM05D004817 ORTHO05D005790 2.5e-12 75.1 78 53.8
CARHR092890 Cardamine hirsuta HOM05D004817 ORTHO05D005790 3.3e-12 74.7 76 55.3
CDE02G4689 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 3.3e-12 74.7 64 54.7
Nitab4.5_0003998g0090 Nicotiana tabacum HOM05D004817 ORTHO05D005790 3.3e-12 74.7 64 65.6
BcaB06g25835 Brassica carinata HOM05D004817 ORTHO05D005790 4.3e-12 74.3 78 55.1
C08p05160 Brassica napus HOM05D004817 ORTHO05D005790 5.6e-12 73.9 71 54.9
Haze_00750 Corylus avellana HOM05D004817 ORTHO05D005790 5.6e-12 73.9 56 67.9
CsaV3_3G015620 Cucumis sativus L. HOM05D004817 ORTHO05D005790 5.6e-12 73.9 84 51.2
Carub.0001s3746 Capsella rubella HOM05D004817 ORTHO05D005790 7.4e-12 73.6 81 54.3
Sp1g35290 Schrenkiella parvula HOM05D004817 ORTHO05D005790 9.6e-12 73.2 78 52.6
BraA06t23656Z Brassica rapa HOM05D004817 ORTHO05D005790 1.3e-11 72.8 78 52.6
Aa31LG10G5430 Aethionema arabicum HOM05D004817 ORTHO05D005790 2.8e-11 71.6 81 51.9
AT3G17580 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 2.8e-11 71.6 81 51.9
BcaC08g43030 Brassica carinata HOM05D004817 ORTHO05D005790 2.8e-11 71.6 71 52.1
C06p02830 Brassica napus HOM05D004817 ORTHO05D005790 2.8e-11 71.6 71 52.1
BolC6t35412H Brassica oleracea HOM05D004817 ORTHO05D005790 2.8e-11 71.6 71 52.1
CANSAT78G0586 Cannabis sativa HOM05D004817 ORTHO05D005790 2.8e-11 71.6 87 50.6
AL3G30650 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 4.8e-11 70.9 74 52.7
PSO761G0543 Papaver somniferum HOM05D004817 ORTHO05D005790 4.8e-11 70.9 70 55.7
ATR0796G174 Amborella trichopoda HOM05D004817 ORTHO05D005790 1.1e-10 69.7 64 56.2
Aa31LG8G4450 Aethionema arabicum HOM05D004817 ORTHO05D005790 1.8e-10 68.9 85 49.4
CDE08G0719 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 4.0e-10 67.8 64 50.0
Zm00001eb332330 Zea mays HOM05D004817 ORTHO05D005790 6.9e-10 67.0 81 44.4
DCAR_030417 Daucus carota HOM05D004817 ORTHO05D005790 9.0e-10 66.6 95 43.2
Eucgr.H01515 Eucalyptus grandis HOM05D004817 ORTHO05D005790 2.6e-09 65.1 77 48.1
Zm00001eb129600 Zea mays HOM05D004817 ORTHO05D005790 4.5e-09 64.3 77 44.2
DCAR_002559 Daucus carota HOM05D004817 ORTHO05D005790 1.7e-08 62.4 90 43.3
Os01g0288200 Oryza sativa ssp. japonica HOM05D004817 ORTHO05D005790 2.9e-08 61.6 76 43.4
TAR365G0774 Trochodendron aralioides HOM05D004817 ORTHO05D005790 4.9e-08 60.8 33 78.8
HPP92_010590 Vanilla planifolia HOM05D004817 ORTHO05D005790 2.1e-06 55.5 50 62.0


User provided reference genes

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