Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0073741 Lupinus albus HOM05D002165 ORTHO05D001531 8.1e-35 149.8 74 100.0
Lalb_Chr11g0073691 Lupinus albus HOM05D002165 ORTHO05D001531 4.2e-31 137.5 74 91.9
Lalb_Chr11g0073701 Lupinus albus HOM05D002165 ORTHO05D001531 7.8e-30 133.3 74 89.2
Lalb_Chr11g0073711 Lupinus albus HOM05D002165 ORTHO05D001531 3.0e-29 131.3 74 89.2
Lalb_Chr11g0073721 Lupinus albus HOM05D002165 ORTHO05D001531 4.8e-27 124.0 74 85.1
Lj6g0008561 Lotus japonicus HOM05D002165 ORTHO05D001531 4.9e-24 114.0 80 75.0
Glyma.09G080700 Glycine max HOM05D002165 ORTHO05D001531 1.4e-23 112.5 80 75.0
Ca_02322_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 4.2e-23 110.9 80 76.2
Ca_30364_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 4.2e-23 110.9 80 76.2
Glyma.15G185700 Glycine max HOM05D002165 ORTHO05D001531 5.4e-23 110.5 80 75.0
Lalb_Chr08g0232971 Lupinus albus HOM05D002165 ORTHO05D001531 7.1e-23 110.2 77 72.7
Medtr2g044970 Medicago truncatula HOM05D002165 ORTHO05D001531 2.7e-22 108.2 79 75.9
Phvul.009G221300 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 1.7e-21 105.5 78 73.1
Psat1g016840 Pisum sativum HOM05D002165 ORTHO05D001531 3.0e-21 104.8 78 73.1
TPR.G29235 Trifolium pratense HOM05D002165 ORTHO05D001531 3.0e-21 104.8 79 72.2
Medtr2g044960 Medicago truncatula HOM05D002165 ORTHO05D001531 5.1e-21 104.0 79 73.4
Phvul.009G221200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 1.5e-20 102.4 70 75.7
Phvul.009G221100 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 4.3e-20 100.9 79 67.1
Psat1g017000 Pisum sativum HOM05D002165 ORTHO05D001531 5.6e-20 100.5 78 70.5
Glyma.15G185400 Glycine max HOM05D002165 ORTHO05D001531 2.1e-19 98.6 84 66.7
Glyma.15G185600 Glycine max HOM05D002165 ORTHO05D001531 2.1e-19 98.6 63 74.6
Phvul.009G221400 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 2.1e-19 98.6 79 64.6
Glyma.09G080800 Glycine max HOM05D002165 ORTHO05D001531 4.8e-19 97.4 63 74.6
TPR.G29438 Trifolium pratense HOM05D002165 ORTHO05D001531 5.3e-18 94.0 72 73.6
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 9.0e-18 93.2 81 64.2
Psat4g020920 Pisum sativum HOM05D002165 ORTHO05D001531 4.2e-15 84.3 80 61.2
Glyma.17G042500 Glycine max HOM05D002165 ORTHO05D001531 7.1e-15 83.6 80 60.0
Lalb_Chr12g0200511 Lupinus albus HOM05D002165 ORTHO05D001531 7.1e-15 83.6 82 62.2
Phvul.003G124200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 3.5e-14 81.3 80 60.0
Medtr4g124220 Medicago truncatula HOM05D002165 ORTHO05D001531 6.0e-14 80.5 79 57.0
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 3.9e-13 77.8 70 60.0
Ca_21362_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 8.7e-13 76.6 79 54.4
Phvul.009G221500 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 1.3e-11 72.8 71 56.3
Lalb_Chr13g0299051 Lupinus albus HOM05D002165 ORTHO05D001531 3.7e-11 71.2 80 55.0
GSVIVG01017704001 Vitis vinifera HOM05D002165 ORTHO05D001531 3.7e-11 71.2 68 57.4
GSVIVG01017705001 Vitis vinifera HOM05D002165 ORTHO05D001531 3.7e-11 71.2 68 57.4
GSVIVG01017706001 Vitis vinifera HOM05D002165 ORTHO05D001531 3.7e-11 71.2 68 57.4
GSVIVG01017707001 Vitis vinifera HOM05D002165 ORTHO05D001531 6.2e-11 70.5 68 57.4
RcHm_v2.0_Chr4g0427981 Rosa chinensis HOM05D002165 ORTHO05D001531 8.1e-11 70.1 67 53.7
Aa31LG11G9930 Aethionema arabicum HOM05D002165 ORTHO05D001531 1.1e-10 69.7 76 48.7
FvH4_4g21750 Fragaria vesca HOM05D002165 ORTHO05D001531 1.4e-10 69.3 67 53.7
FAN07G0342 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.4e-10 69.3 67 53.7
FAN12G3878 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.4e-10 69.3 67 53.7
FAN17G1996 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.4e-10 69.3 67 53.7
AUR62002532 Chenopodium quinoa HOM05D002165 ORTHO05D001531 4.0e-10 67.8 65 50.8
AUR62023661 Chenopodium quinoa HOM05D002165 ORTHO05D001531 6.9e-10 67.0 62 51.6
MD13G1137400 Malus domestica HOM05D002165 ORTHO05D001531 6.9e-10 67.0 78 52.6
Prupe.1G207900 Prunus persica HOM05D002165 ORTHO05D001531 6.9e-10 67.0 69 53.6
EL10Ac3g06229 Beta vulgaris HOM05D002165 ORTHO05D001531 9.0e-10 66.6 65 47.7
MD13G1137300 Malus domestica HOM05D002165 ORTHO05D001531 1.2e-09 66.2 73 53.4
QL06p014681 Quercus lobata HOM05D002165 ORTHO05D001531 1.5e-09 65.9 69 58.0
MD16G1133300 Malus domestica HOM05D002165 ORTHO05D001531 2.0e-09 65.5 78 52.6
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 5.8e-09 63.9 74 48.6
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 7.6e-09 63.5 72 47.2
Nn4g25284 Nelumbo nucifera HOM05D002165 ORTHO05D001531 1.3e-08 62.8 71 53.5
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 1.7e-08 62.4 71 47.9
CiPaw.01G127300 Carya illinoinensis HOM05D002165 ORTHO05D001531 2.2e-08 62.0 77 49.4
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 3.8e-08 61.2 70 48.6
BcaB06g25836 Brassica carinata HOM05D002165 ORTHO05D001531 3.8e-08 61.2 74 47.3
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 4.9e-08 60.8 72 47.2
PSO761G0534 Papaver somniferum HOM05D002165 ORTHO05D001531 4.9e-08 60.8 56 55.4
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 6.5e-08 60.5 72 45.8
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.1e-07 59.7 74 45.9
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 1.1e-07 59.7 71 46.5
BcaC05g28774 Brassica carinata HOM05D002165 ORTHO05D001531 1.1e-07 59.7 74 45.9
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 1.1e-07 59.7 71 46.5
C05p48810 Brassica napus HOM05D002165 ORTHO05D001531 1.1e-07 59.7 74 45.9
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 1.1e-07 59.7 71 46.5
BolC5t33619H Brassica oleracea HOM05D002165 ORTHO05D001531 1.1e-07 59.7 74 45.9
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 1.1e-07 59.7 71 46.5
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 1.1e-07 59.7 71 46.5
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 1.4e-07 59.3 44 59.1
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 1.4e-07 59.3 74 45.9
Carub.0003s0521 Capsella rubella HOM05D002165 ORTHO05D001531 1.4e-07 59.3 72 45.8
Sc16g0009410 Simmondsia chinensis HOM05D002165 ORTHO05D001531 1.4e-07 59.3 67 47.8
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 1.9e-07 58.9 72 45.8
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 1.9e-07 58.9 72 45.8
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 1.9e-07 58.9 72 45.8
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 2.5e-07 58.5 74 44.6
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 2.5e-07 58.5 74 44.6
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 2.5e-07 58.5 74 44.6
CiPaw.02G068700 Carya illinoinensis HOM05D002165 ORTHO05D001531 2.5e-07 58.5 69 46.4
DCAR_023419 Daucus carota HOM05D002165 ORTHO05D001531 2.5e-07 58.5 62 53.2
BraA05t22057Z Brassica rapa HOM05D002165 ORTHO05D001531 3.2e-07 58.2 74 44.6
MELO3C006762.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.2e-07 58.2 79 48.1
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 3.2e-07 58.2 44 59.1
AL3G30640 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 4.2e-07 57.8 76 43.4
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 4.2e-07 57.8 70 45.7
Thhalv10022047m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 4.2e-07 57.8 73 45.2
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 4.2e-07 57.8 72 47.2
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 5.5e-07 57.4 70 45.7
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 5.5e-07 57.4 70 45.7
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 5.5e-07 57.4 70 45.7
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 5.5e-07 57.4 70 45.7
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 5.5e-07 57.4 70 45.7
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 5.5e-07 57.4 70 45.7
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 5.5e-07 57.4 70 45.7
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 5.5e-07 57.4 70 45.7
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 5.5e-07 57.4 70 45.7
Carub.0003s1728 Capsella rubella HOM05D002165 ORTHO05D001531 5.5e-07 57.4 72 45.8
Potri.010G003900 Populus trichocarpa HOM05D002165 ORTHO05D001531 5.5e-07 57.4 68 51.5
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 7.1e-07 57.0 74 44.6
BcaC01g03752 Brassica carinata HOM05D002165 ORTHO05D001531 7.1e-07 57.0 75 45.3
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 7.1e-07 57.0 74 44.6
A05p32290 Brassica napus HOM05D002165 ORTHO05D001531 7.1e-07 57.0 74 43.2
BolC3t17173H Brassica oleracea HOM05D002165 ORTHO05D001531 7.1e-07 57.0 75 45.3
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 7.1e-07 57.0 74 44.6
CARHR092880 Cardamine hirsuta HOM05D002165 ORTHO05D001531 7.1e-07 57.0 76 43.4
AT5G26620 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 9.3e-07 56.6 41 58.5
BcaC05g29776 Brassica carinata HOM05D002165 ORTHO05D001531 9.3e-07 56.6 44 59.1
BcaC05g30083 Brassica carinata HOM05D002165 ORTHO05D001531 9.3e-07 56.6 44 59.1
A03p40240 Brassica napus HOM05D002165 ORTHO05D001531 9.3e-07 56.6 75 45.3
A05p42200 Brassica napus HOM05D002165 ORTHO05D001531 9.3e-07 56.6 44 59.1
C05p61420 Brassica napus HOM05D002165 ORTHO05D001531 9.3e-07 56.6 44 59.1
BolC5t34800H Brassica oleracea HOM05D002165 ORTHO05D001531 9.3e-07 56.6 44 59.1
BraA05t22939Z Brassica rapa HOM05D002165 ORTHO05D001531 9.3e-07 56.6 44 59.1
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 9.3e-07 56.6 75 44.0
CsaV3_3G015630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 9.3e-07 56.6 75 46.7
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 1.2e-06 56.2 70 47.1
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 1.2e-06 56.2 70 47.1
Sed0018176 Sechium edule HOM05D002165 ORTHO05D001531 1.2e-06 56.2 75 46.7
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.6e-06 55.8 48 50.0
DCAR_026927 Daucus carota HOM05D002165 ORTHO05D001531 2.1e-06 55.5 55 50.9
Sp3g04720 Schrenkiella parvula HOM05D002165 ORTHO05D001531 2.1e-06 55.5 74 44.6
C03p48940 Brassica napus HOM05D002165 ORTHO05D001531 2.7e-06 55.1 68 48.5
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 2.7e-06 55.1 67 49.3
BcaB04g18950 Brassica carinata HOM05D002165 ORTHO05D001531 3.5e-06 54.7 72 44.4
MBI19_g04832_MAGBIO Magnolia biondii HOM05D002165 ORTHO05D001531 3.5e-06 54.7 39 61.5
BraA03t13177Z Brassica rapa HOM05D002165 ORTHO05D001531 4.6e-06 54.3 72 44.4
Nn3g21957 Nelumbo nucifera HOM05D002165 ORTHO05D001531 4.6e-06 54.3 71 40.8
HPP92_027403 Vanilla planifolia HOM05D023939 ORTHO05D018066 4.6e-06 54.3 72 41.7
Aa31LG8G4440 Aethionema arabicum HOM05D002165 ORTHO05D001531 6.0e-06 53.9 73 41.1
BcaC09g47857 Brassica carinata HOM05D002165 ORTHO05D001531 6.0e-06 53.9 74 45.9
BolC1t05659H Brassica oleracea HOM05D002165 ORTHO05D001531 6.0e-06 53.9 74 45.9
BraA01t04469Z Brassica rapa HOM05D002165 ORTHO05D001531 6.0e-06 53.9 74 45.9
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 6.0e-06 53.9 69 44.9
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 6.0e-06 53.9 68 45.6
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 7.9e-06 53.5 76 47.4


User provided reference genes

Program Settings