Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0073721 Lupinus albus HOM05D002165 ORTHO05D001531 2.8e-35 151.4 74 100.0
Lalb_Chr11g0073711 Lupinus albus HOM05D002165 ORTHO05D001531 1.2e-30 136.0 74 91.9
Lalb_Chr11g0073691 Lupinus albus HOM05D002165 ORTHO05D001531 1.6e-27 125.6 74 86.5
Lalb_Chr11g0073741 Lupinus albus HOM05D002165 ORTHO05D001531 1.1e-26 122.9 74 85.1
Lalb_Chr11g0073701 Lupinus albus HOM05D002165 ORTHO05D001531 3.4e-25 117.9 74 81.1
Lj6g0008561 Lotus japonicus HOM05D002165 ORTHO05D001531 4.6e-22 107.5 71 77.5
Glyma.09G080700 Glycine max HOM05D002165 ORTHO05D001531 6.0e-22 107.1 73 76.7
Ca_02322_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 1.0e-21 106.3 73 76.7
Ca_30364_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 1.0e-21 106.3 73 76.7
Glyma.15G185700 Glycine max HOM05D002165 ORTHO05D001531 2.3e-21 105.1 73 76.7
Lalb_Chr08g0232971 Lupinus albus HOM05D002165 ORTHO05D001531 2.3e-21 105.1 77 71.4
Medtr2g044970 Medicago truncatula HOM05D002165 ORTHO05D001531 1.9e-20 102.1 72 73.6
Psat1g016840 Pisum sativum HOM05D002165 ORTHO05D001531 9.6e-20 99.8 72 72.2
Psat1g017000 Pisum sativum HOM05D002165 ORTHO05D001531 1.3e-19 99.4 72 72.2
Phvul.009G221100 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 2.4e-18 95.1 70 68.6
Phvul.009G221200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 3.1e-18 94.7 70 71.4
Glyma.15G185600 Glycine max HOM05D002165 ORTHO05D001531 4.0e-18 94.4 63 73.0
Phvul.009G221300 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 4.0e-18 94.4 69 71.0
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 5.3e-18 94.0 80 68.8
Glyma.09G080800 Glycine max HOM05D002165 ORTHO05D001531 9.0e-18 93.2 63 73.0
Phvul.009G221400 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 1.2e-17 92.8 70 65.7
TPR.G29235 Trifolium pratense HOM05D002165 ORTHO05D001531 2.6e-17 91.7 72 68.1
Medtr2g044960 Medicago truncatula HOM05D002165 ORTHO05D001531 4.5e-17 90.9 72 69.4
Glyma.15G185400 Glycine max HOM05D002165 ORTHO05D001531 7.6e-17 90.1 73 65.8
TPR.G29438 Trifolium pratense HOM05D002165 ORTHO05D001531 4.9e-16 87.4 65 70.8
Glyma.17G042500 Glycine max HOM05D002165 ORTHO05D001531 7.1e-15 83.6 70 64.3
Phvul.003G124200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 9.3e-15 83.2 70 62.9
Psat4g020920 Pisum sativum HOM05D002165 ORTHO05D001531 9.3e-15 83.2 80 62.5
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 1.2e-14 82.8 70 64.3
Medtr4g124220 Medicago truncatula HOM05D002165 ORTHO05D001531 1.0e-13 79.7 79 57.0
Lalb_Chr12g0200511 Lupinus albus HOM05D002165 ORTHO05D001531 1.1e-12 76.3 79 60.8
Ca_21362_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 2.5e-12 75.1 71 54.9
RcHm_v2.0_Chr4g0427981 Rosa chinensis HOM05D002165 ORTHO05D001531 1.3e-11 72.8 71 54.9
FvH4_4g21750 Fragaria vesca HOM05D002165 ORTHO05D001531 2.1e-11 72.0 71 54.9
FAN07G0342 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.1e-11 72.0 71 54.9
FAN12G3878 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.1e-11 72.0 71 54.9
FAN17G1996 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.1e-11 72.0 71 54.9
MD13G1137400 Malus domestica HOM05D002165 ORTHO05D001531 2.8e-11 71.6 78 52.6
MD16G1133300 Malus domestica HOM05D002165 ORTHO05D001531 2.8e-11 71.6 78 56.4
Lalb_Chr13g0299051 Lupinus albus HOM05D002165 ORTHO05D001531 8.1e-11 70.1 78 53.8
GSVIVG01017704001 Vitis vinifera HOM05D002165 ORTHO05D001531 8.1e-11 70.1 64 57.8
GSVIVG01017705001 Vitis vinifera HOM05D002165 ORTHO05D001531 8.1e-11 70.1 64 57.8
GSVIVG01017706001 Vitis vinifera HOM05D002165 ORTHO05D001531 8.1e-11 70.1 64 57.8
MD13G1137300 Malus domestica HOM05D002165 ORTHO05D001531 1.4e-10 69.3 75 54.7
Prupe.1G207900 Prunus persica HOM05D002165 ORTHO05D001531 3.1e-10 68.2 77 54.5
AUR62002532 Chenopodium quinoa HOM05D002165 ORTHO05D001531 5.3e-10 67.4 63 54.0
Phvul.009G221500 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 6.9e-10 67.0 71 57.7
GSVIVG01017707001 Vitis vinifera HOM05D002165 ORTHO05D001531 9.0e-10 66.6 65 55.4
AUR62023661 Chenopodium quinoa HOM05D002165 ORTHO05D001531 1.2e-09 66.2 60 55.0
EL10Ac3g06229 Beta vulgaris HOM05D002165 ORTHO05D001531 2.0e-09 65.5 63 50.8
Aa31LG11G9930 Aethionema arabicum HOM05D002165 ORTHO05D001531 2.6e-09 65.1 76 48.7
QL06p014681 Quercus lobata HOM05D002165 ORTHO05D001531 3.4e-09 64.7 69 56.5
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 4.5e-09 64.3 67 53.7
CiPaw.01G127300 Carya illinoinensis HOM05D002165 ORTHO05D001531 4.5e-09 64.3 76 50.0
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 1.0e-08 63.2 44 63.6
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 1.0e-08 63.2 44 63.6
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 1.0e-08 63.2 44 63.6
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 1.3e-08 62.8 74 50.0
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 1.3e-08 62.8 69 49.3
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 1.7e-08 62.4 68 51.5
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 2.2e-08 62.0 67 50.7
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 2.2e-08 62.0 67 50.7
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 2.2e-08 62.0 67 50.7
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 2.2e-08 62.0 67 50.7
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 2.2e-08 62.0 67 50.7
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 2.2e-08 62.0 41 65.9
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 2.9e-08 61.6 44 63.6
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 2.9e-08 61.6 44 63.6
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 2.9e-08 61.6 44 63.6
Carub.0003s0521 Capsella rubella HOM05D002165 ORTHO05D001531 2.9e-08 61.6 41 65.9
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 2.9e-08 61.6 44 63.6
Potri.010G003900 Populus trichocarpa HOM05D002165 ORTHO05D001531 2.9e-08 61.6 66 56.1
CiPaw.02G068700 Carya illinoinensis HOM05D002165 ORTHO05D001531 3.8e-08 61.2 69 50.7
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 4.9e-08 60.8 71 47.9
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 4.9e-08 60.8 71 52.1
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 4.9e-08 60.8 69 50.7
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 4.9e-08 60.8 71 52.1
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 4.9e-08 60.8 67 50.7
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 4.9e-08 60.8 72 48.6
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 4.9e-08 60.8 72 48.6
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 4.9e-08 60.8 72 48.6
AT5G26620 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 6.5e-08 60.5 41 63.4
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 6.5e-08 60.5 67 50.7
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 6.5e-08 60.5 67 50.7
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 6.5e-08 60.5 67 50.7
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 6.5e-08 60.5 67 50.7
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 6.5e-08 60.5 67 50.7
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 6.5e-08 60.5 67 50.7
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 6.5e-08 60.5 67 50.7
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 6.5e-08 60.5 67 50.7
Sp3g04720 Schrenkiella parvula HOM05D002165 ORTHO05D001531 6.5e-08 60.5 44 63.6
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 1.1e-07 59.7 67 50.7
Sc16g0009410 Simmondsia chinensis HOM05D002165 ORTHO05D001531 1.1e-07 59.7 70 50.0
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 1.4e-07 59.3 44 61.4
A05p42200 Brassica napus HOM05D002165 ORTHO05D001531 1.4e-07 59.3 75 46.7
BraA05t22939Z Brassica rapa HOM05D002165 ORTHO05D001531 1.4e-07 59.3 75 46.7
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 1.4e-07 59.3 74 47.3
BcaC05g30083 Brassica carinata HOM05D002165 ORTHO05D001531 1.9e-07 58.9 75 46.7
C05p61420 Brassica napus HOM05D002165 ORTHO05D001531 1.9e-07 58.9 75 46.7
BolC5t34800H Brassica oleracea HOM05D002165 ORTHO05D001531 1.9e-07 58.9 75 46.7
BcaC05g29776 Brassica carinata HOM05D002165 ORTHO05D001531 2.5e-07 58.5 75 46.7
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 2.5e-07 58.5 65 52.3
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 3.2e-07 58.2 67 50.7
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 3.2e-07 58.2 67 50.7
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 3.2e-07 58.2 44 61.4
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.2e-07 57.8 69 49.3
PSO761G0534 Papaver somniferum HOM05D002165 ORTHO05D001531 4.2e-07 57.8 74 44.6
MELO3C006762.2 Cucumis melo HOM05D002165 ORTHO05D001531 7.1e-07 57.0 79 48.1
CsaV3_3G015630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 9.3e-07 56.6 74 48.6
Nn4g25284 Nelumbo nucifera HOM05D002165 ORTHO05D001531 9.3e-07 56.6 43 62.8
Gohir.A02G059800 Gossypium hirsutum HOM05D002165 ORTHO05D001531 1.2e-06 56.2 68 51.5
Gohir.D02G065400 Gossypium hirsutum HOM05D002165 ORTHO05D001531 1.2e-06 56.2 68 51.5
Gorai.005G074100 Gossypium raimondii HOM05D002165 ORTHO05D001531 1.2e-06 56.2 68 51.5
Sabra10G0003300 Salix brachista HOM05D002165 ORTHO05D001531 1.2e-06 56.2 62 51.6
BcaC09g47857 Brassica carinata HOM05D002165 ORTHO05D001531 2.1e-06 55.5 67 49.3
BolC1t05659H Brassica oleracea HOM05D002165 ORTHO05D001531 2.1e-06 55.5 67 49.3
BraA01t04469Z Brassica rapa HOM05D002165 ORTHO05D001531 2.1e-06 55.5 67 49.3
EL10Ac4g09564 Beta vulgaris HOM05D002165 ORTHO05D001531 2.7e-06 55.1 34 67.6
AUR62000479 Chenopodium quinoa HOM05D002165 ORTHO05D001531 2.7e-06 55.1 34 67.6
AUR62006822 Chenopodium quinoa HOM05D002165 ORTHO05D001531 2.7e-06 55.1 34 67.6
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.7e-06 55.1 48 52.1
Gohir.D09G243000 Gossypium hirsutum HOM05D002165 ORTHO05D001531 2.7e-06 55.1 65 53.8
Gorai.006G266800 Gossypium raimondii HOM05D002165 ORTHO05D001531 2.7e-06 55.1 65 53.8
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 4.6e-06 54.3 40 60.0
Gohir.A09G242300 Gossypium hirsutum HOM05D002165 ORTHO05D001531 4.6e-06 54.3 65 52.3
DCAR_023419 Daucus carota HOM05D002165 ORTHO05D001531 6.0e-06 53.9 61 50.8
Sed0018176 Sechium edule HOM05D002165 ORTHO05D001531 6.0e-06 53.9 70 45.7
Ah.06g190740 Amaranthus hybridus HOM05D002165 ORTHO05D001531 7.9e-06 53.5 49 49.0
Aqoxy2G02476 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 7.9e-06 53.5 64 46.9
COL.COLO4_36933 Corchorus olitorius HOM05D002165 ORTHO05D001531 7.9e-06 53.5 65 52.3
DCAR_026927 Daucus carota HOM05D002165 ORTHO05D001531 7.9e-06 53.5 60 48.3
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.9e-06 53.5 45 53.3
Psat6g157040 Pisum sativum HOM05D008018 ORTHO05D001531 7.9e-06 53.5 68 50.0


User provided reference genes

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