Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0073691 Lupinus albus HOM05D002165 ORTHO05D001531 6.2e-35 150.2 74 100.0
Lalb_Chr11g0073741 Lupinus albus HOM05D002165 ORTHO05D001531 3.2e-31 137.9 74 91.9
Lalb_Chr11g0073711 Lupinus albus HOM05D002165 ORTHO05D001531 5.1e-29 130.6 74 86.5
Lalb_Chr11g0073701 Lupinus albus HOM05D002165 ORTHO05D001531 6.6e-29 130.2 74 86.5
Lalb_Chr11g0073721 Lupinus albus HOM05D002165 ORTHO05D001531 5.6e-28 127.1 74 86.5
Lj6g0008561 Lotus japonicus HOM05D002165 ORTHO05D001531 4.2e-23 110.9 80 72.5
Glyma.09G080700 Glycine max HOM05D002165 ORTHO05D001531 1.2e-22 109.4 80 72.5
Lalb_Chr08g0232971 Lupinus albus HOM05D002165 ORTHO05D001531 1.2e-22 109.4 77 71.4
Glyma.15G185700 Glycine max HOM05D002165 ORTHO05D001531 4.6e-22 107.5 80 72.5
Ca_02322_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 7.8e-22 106.7 80 72.5
Ca_30364_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 7.8e-22 106.7 80 72.5
Medtr2g044970 Medicago truncatula HOM05D002165 ORTHO05D001531 5.1e-21 104.0 79 72.2
Phvul.009G221300 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 1.1e-20 102.8 78 70.5
Psat1g016840 Pisum sativum HOM05D002165 ORTHO05D001531 5.6e-20 100.5 78 69.2
Psat1g017000 Pisum sativum HOM05D002165 ORTHO05D001531 5.6e-20 100.5 78 70.5
TPR.G29235 Trifolium pratense HOM05D002165 ORTHO05D001531 5.6e-20 100.5 79 68.4
Medtr2g044960 Medicago truncatula HOM05D002165 ORTHO05D001531 9.6e-20 99.8 79 69.6
Phvul.009G221200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 1.3e-19 99.4 70 72.9
Glyma.15G185600 Glycine max HOM05D002165 ORTHO05D001531 1.6e-19 99.0 63 74.6
Phvul.009G221100 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 1.6e-19 99.0 79 64.6
Glyma.09G080800 Glycine max HOM05D002165 ORTHO05D001531 3.6e-19 97.8 63 74.6
Glyma.15G185400 Glycine max HOM05D002165 ORTHO05D001531 6.2e-19 97.1 84 64.3
Phvul.009G221400 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 8.1e-19 96.7 79 62.0
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 1.5e-17 92.4 81 64.2
TPR.G29438 Trifolium pratense HOM05D002165 ORTHO05D001531 5.8e-17 90.5 72 70.8
Psat4g020920 Pisum sativum HOM05D002165 ORTHO05D001531 2.4e-15 85.1 80 61.2
Lalb_Chr12g0200511 Lupinus albus HOM05D002165 ORTHO05D001531 4.2e-15 84.3 82 62.2
Glyma.17G042500 Glycine max HOM05D002165 ORTHO05D001531 7.1e-15 83.6 83 57.8
Medtr4g124220 Medicago truncatula HOM05D002165 ORTHO05D001531 9.3e-15 83.2 79 58.2
Phvul.003G124200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 3.5e-14 81.3 77 58.4
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 6.0e-14 80.5 74 59.5
Phvul.009G221500 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 5.1e-13 77.4 62 61.3
Ca_21362_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 6.7e-13 77.0 79 53.2
RcHm_v2.0_Chr4g0427981 Rosa chinensis HOM05D002165 ORTHO05D001531 1.1e-12 76.3 70 55.7
FvH4_4g21750 Fragaria vesca HOM05D002165 ORTHO05D001531 1.9e-12 75.5 70 55.7
FAN07G0342 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.9e-12 75.5 70 55.7
FAN12G3878 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.9e-12 75.5 70 55.7
FAN17G1996 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.9e-12 75.5 70 55.7
Lalb_Chr13g0299051 Lupinus albus HOM05D002165 ORTHO05D001531 4.3e-12 74.3 80 56.2
Aa31LG11G9930 Aethionema arabicum HOM05D002165 ORTHO05D001531 7.4e-12 73.6 76 51.3
MD16G1133300 Malus domestica HOM05D002165 ORTHO05D001531 1.3e-11 72.8 78 56.4
MD13G1137400 Malus domestica HOM05D002165 ORTHO05D001531 1.6e-11 72.4 78 55.1
Prupe.1G207900 Prunus persica HOM05D002165 ORTHO05D001531 3.7e-11 71.2 77 55.8
GSVIVG01017704001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.1e-10 69.7 70 54.3
GSVIVG01017705001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.1e-10 69.7 70 54.3
GSVIVG01017706001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.1e-10 69.7 70 54.3
MD13G1137300 Malus domestica HOM05D002165 ORTHO05D001531 1.4e-10 69.3 75 54.7
AUR62002532 Chenopodium quinoa HOM05D002165 ORTHO05D001531 1.8e-10 68.9 65 50.8
GSVIVG01017707001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.8e-10 68.9 70 54.3
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 5.3e-10 67.4 75 48.0
QL06p014681 Quercus lobata HOM05D002165 ORTHO05D001531 6.9e-10 67.0 69 58.0
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 9.0e-10 66.6 74 50.0
Nn4g25284 Nelumbo nucifera HOM05D002165 ORTHO05D001531 9.0e-10 66.6 73 54.8
CiPaw.01G127300 Carya illinoinensis HOM05D002165 ORTHO05D001531 2.0e-09 65.5 77 51.9
EL10Ac3g06229 Beta vulgaris HOM05D002165 ORTHO05D001531 2.6e-09 65.1 65 46.2
AUR62023661 Chenopodium quinoa HOM05D002165 ORTHO05D001531 2.6e-09 65.1 62 50.0
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 3.4e-09 64.7 74 48.6
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 3.4e-09 64.7 77 49.4
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 4.5e-09 64.3 74 48.6
MELO3C006762.2 Cucumis melo HOM05D002165 ORTHO05D001531 4.5e-09 64.3 79 50.6
PSO761G0534 Papaver somniferum HOM05D002165 ORTHO05D001531 4.5e-09 64.3 77 48.1
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 7.6e-09 63.5 72 48.6
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 7.6e-09 63.5 74 47.3
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 7.6e-09 63.5 74 47.3
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 7.6e-09 63.5 74 47.3
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 7.6e-09 63.5 74 45.9
Sc16g0009410 Simmondsia chinensis HOM05D002165 ORTHO05D001531 7.6e-09 63.5 67 49.3
BcaB06g25836 Brassica carinata HOM05D002165 ORTHO05D001531 1.0e-08 63.2 74 45.9
Carub.0003s0521 Capsella rubella HOM05D002165 ORTHO05D001531 1.0e-08 63.2 72 48.6
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 1.3e-08 62.8 44 61.4
CsaV3_3G015630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.3e-08 62.8 75 49.3
AL3G30640 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.7e-08 62.4 76 44.7
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 1.7e-08 62.4 71 49.3
DCAR_023419 Daucus carota HOM05D002165 ORTHO05D001531 1.7e-08 62.4 62 54.8
Thhalv10022047m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 1.7e-08 62.4 73 46.6
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 2.2e-08 62.0 74 47.3
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 2.2e-08 62.0 74 47.3
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 2.2e-08 62.0 74 47.3
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 2.9e-08 61.6 72 48.6
BcaC05g28774 Brassica carinata HOM05D002165 ORTHO05D001531 2.9e-08 61.6 77 42.9
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 2.9e-08 61.6 72 48.6
C05p48810 Brassica napus HOM05D002165 ORTHO05D001531 2.9e-08 61.6 77 42.9
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 2.9e-08 61.6 72 48.6
BolC5t33619H Brassica oleracea HOM05D002165 ORTHO05D001531 2.9e-08 61.6 77 42.9
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 2.9e-08 61.6 72 48.6
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 2.9e-08 61.6 72 48.6
CARHR092880 Cardamine hirsuta HOM05D002165 ORTHO05D001531 2.9e-08 61.6 76 44.7
Nn3g21957 Nelumbo nucifera HOM05D002165 ORTHO05D001531 3.8e-08 61.2 73 43.8
Sed0018176 Sechium edule HOM05D002165 ORTHO05D001531 3.8e-08 61.2 75 48.0
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 3.8e-08 61.2 72 50.0
Carub.0003s1728 Capsella rubella HOM05D002165 ORTHO05D001531 4.9e-08 60.8 72 47.2
CiPaw.02G068700 Carya illinoinensis HOM05D002165 ORTHO05D001531 4.9e-08 60.8 73 46.6
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 4.9e-08 60.8 52 51.9
Potri.010G003900 Populus trichocarpa HOM05D002165 ORTHO05D001531 4.9e-08 60.8 66 54.5
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 6.5e-08 60.5 73 46.6
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 6.5e-08 60.5 73 46.6
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 6.5e-08 60.5 73 46.6
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 6.5e-08 60.5 76 46.1
Sp3g04720 Schrenkiella parvula HOM05D002165 ORTHO05D001531 6.5e-08 60.5 74 47.3
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 1.1e-07 59.7 71 46.5
BcaC09g47857 Brassica carinata HOM05D002165 ORTHO05D001531 1.1e-07 59.7 74 48.6
BolC1t05659H Brassica oleracea HOM05D002165 ORTHO05D001531 1.1e-07 59.7 74 48.6
BraA01t04469Z Brassica rapa HOM05D002165 ORTHO05D001531 1.1e-07 59.7 74 48.6
DCAR_026927 Daucus carota HOM05D002165 ORTHO05D001531 1.1e-07 59.7 55 52.7
Aa31LG8G4440 Aethionema arabicum HOM05D002165 ORTHO05D001531 1.9e-07 58.9 74 41.9
AT5G26620 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 1.9e-07 58.9 41 61.0
BcaC01g03752 Brassica carinata HOM05D002165 ORTHO05D001531 1.9e-07 58.9 73 45.2
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 1.9e-07 58.9 71 46.5
BcaC05g29776 Brassica carinata HOM05D002165 ORTHO05D001531 1.9e-07 58.9 44 59.1
BcaC05g30083 Brassica carinata HOM05D002165 ORTHO05D001531 1.9e-07 58.9 44 59.1
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 1.9e-07 58.9 71 46.5
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 1.9e-07 58.9 71 46.5
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 1.9e-07 58.9 71 46.5
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 1.9e-07 58.9 71 46.5
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 1.9e-07 58.9 71 46.5
C05p61420 Brassica napus HOM05D002165 ORTHO05D001531 1.9e-07 58.9 44 59.1
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 1.9e-07 58.9 71 46.5
BolC3t17173H Brassica oleracea HOM05D002165 ORTHO05D001531 1.9e-07 58.9 73 45.2
BolC5t34800H Brassica oleracea HOM05D002165 ORTHO05D001531 1.9e-07 58.9 44 59.1
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 1.9e-07 58.9 71 46.5
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 1.9e-07 58.9 74 44.6
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 1.9e-07 58.9 71 46.5
BcaB04g18950 Brassica carinata HOM05D002165 ORTHO05D001531 2.5e-07 58.5 76 43.4
A03p40240 Brassica napus HOM05D002165 ORTHO05D001531 2.5e-07 58.5 73 45.2
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 3.2e-07 58.2 71 46.5
A05p42200 Brassica napus HOM05D002165 ORTHO05D001531 4.2e-07 57.8 75 44.0
C03p48940 Brassica napus HOM05D002165 ORTHO05D001531 4.2e-07 57.8 69 47.8
BraA05t22057Z Brassica rapa HOM05D002165 ORTHO05D001531 4.2e-07 57.8 74 41.9
BraA05t22939Z Brassica rapa HOM05D002165 ORTHO05D001531 4.2e-07 57.8 75 44.0
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 4.2e-07 57.8 65 50.8
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 4.2e-07 57.8 72 45.8
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 5.5e-07 57.4 73 45.2
Aqoxy2G02476 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 7.1e-07 57.0 64 46.9
BraA03t13177Z Brassica rapa HOM05D002165 ORTHO05D001531 7.1e-07 57.0 73 43.8
A05p32290 Brassica napus HOM05D002165 ORTHO05D001531 9.3e-07 56.6 74 40.5
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 9.3e-07 56.6 76 48.7
AUR62000479 Chenopodium quinoa HOM05D002165 ORTHO05D001531 1.2e-06 56.2 35 65.7
AUR62006822 Chenopodium quinoa HOM05D002165 ORTHO05D001531 1.2e-06 56.2 35 65.7
HPP92_027403 Vanilla planifolia HOM05D023939 ORTHO05D018066 1.2e-06 56.2 72 43.1
EL10Ac4g09564 Beta vulgaris HOM05D002165 ORTHO05D001531 1.6e-06 55.8 46 54.3
A01p30200 Brassica napus HOM05D002165 ORTHO05D001531 1.6e-06 55.8 74 45.9
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 2.1e-06 55.5 73 45.2
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 2.1e-06 55.5 73 45.2
CsaV3_6G002630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.7e-06 55.1 75 42.7
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 4.6e-06 54.3 72 45.8
Gohir.D09G243000 Gossypium hirsutum HOM05D002165 ORTHO05D001531 6.0e-06 53.9 69 50.7
Gorai.006G266800 Gossypium raimondii HOM05D002165 ORTHO05D001531 6.0e-06 53.9 69 50.7
MBI19_g04832_MAGBIO Magnolia biondii HOM05D002165 ORTHO05D001531 6.0e-06 53.9 66 45.5
Sp3g15700 Schrenkiella parvula HOM05D002165 ORTHO05D001531 7.9e-06 53.5 66 45.5
Sc25g0001810 Simmondsia chinensis HOM05D002165 ORTHO05D001531 7.9e-06 53.5 67 44.8


User provided reference genes

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