Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 3.1e-162 575.1 297 100.0
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 8.0e-150 533.9 297 90.6
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.2e-140 503.4 297 85.2
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 1.8e-138 496.1 297 84.5
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 4.5e-137 491.5 297 84.5
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 7.8e-137 490.7 298 83.2
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 3.3e-135 485.3 297 82.8
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 1.5e-132 476.5 297 81.1
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.0e-132 476.1 297 81.1
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 2.0e-132 476.1 297 82.8
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 2.6e-132 475.7 299 83.3
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 2.6e-132 475.7 297 81.1
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 2.6e-132 475.7 297 81.5
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 4.4e-132 474.9 297 81.1
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 2.2e-131 472.6 297 82.5
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 1.4e-130 469.9 297 80.1
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 3.2e-130 468.8 292 80.8
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 7.0e-130 467.6 296 80.7
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 1.2e-129 466.8 297 79.1
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 4.6e-129 464.9 302 80.1
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 4.6e-129 464.9 297 80.5
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 4.6e-129 464.9 297 79.1
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 6.0e-129 464.5 297 80.5
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 7.8e-129 464.2 297 81.1
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 7.8e-129 464.2 298 80.2
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 7.8e-129 464.2 295 81.0
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 1.7e-128 463.0 299 78.9
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 3.0e-128 462.2 298 80.2
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 5.0e-128 461.5 297 80.5
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 8.6e-128 460.7 297 79.1
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 1.5e-127 459.9 297 78.8
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 1.9e-127 459.5 297 79.1
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.5e-127 459.1 298 78.2
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.5e-127 459.1 298 78.2
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 4.3e-127 458.4 294 80.3
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 5.6e-127 458.0 302 77.8
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 5.6e-127 458.0 295 77.3
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 7.3e-127 457.6 295 76.9
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 7.3e-127 457.6 295 76.9
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 9.5e-127 457.2 297 76.1
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 1.2e-126 456.8 297 78.1
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 2.1e-126 456.1 297 79.5
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 2.1e-126 456.1 298 77.5
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 2.1e-126 456.1 294 78.2
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 2.1e-126 456.1 294 78.2
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 2.8e-126 455.7 302 77.5
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 4.7e-126 454.9 297 76.8
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 8.0e-126 454.1 297 78.1
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 1.1e-125 453.8 297 79.1
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 1.4e-125 453.4 297 76.4
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 1.8e-125 453.0 297 78.5
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 4.0e-125 451.8 297 77.8
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 4.0e-125 451.8 295 75.9
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 5.2e-125 451.4 297 78.1
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 6.8e-125 451.1 297 77.8
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 8.9e-125 450.7 297 77.1
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 8.9e-125 450.7 297 78.5
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 1.2e-124 450.3 297 75.8
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 1.5e-124 449.9 297 78.5
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 3.4e-124 448.7 297 77.8
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 7.5e-124 447.6 297 76.8
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.3e-123 446.8 297 75.4
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 4.9e-123 444.9 341 69.5
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 6.4e-123 444.5 282 79.8
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.1e-122 443.7 315 71.7
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 1.4e-122 443.4 297 75.4
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 2.4e-122 442.6 297 75.1
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 5.4e-122 441.4 297 76.1
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.6e-121 439.9 315 71.7
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 2.1e-121 439.5 297 75.8
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 4.6e-121 438.3 295 75.3
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 4.6e-121 438.3 295 74.9
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 4.6e-121 438.3 295 74.9
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 6.0e-121 438.0 298 76.5
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 6.0e-121 438.0 297 75.1
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 5.1e-120 434.9 289 74.7
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 5.1e-120 434.9 298 75.5
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 8.6e-120 434.1 297 73.7
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 2.5e-119 432.6 297 74.7
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 3.3e-119 432.2 295 74.6
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 4.3e-119 431.8 293 75.8
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 5.6e-119 431.4 315 70.8
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 7.3e-119 431.0 282 77.7
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 9.5e-119 430.6 297 75.1
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.6e-118 429.9 297 73.7
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 4.7e-118 428.3 294 74.1
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 4.7e-118 428.3 294 73.8
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 8.1e-118 427.6 292 75.0
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 1.8e-117 426.4 294 73.8
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 1.8e-117 426.4 294 73.8
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 3.1e-117 425.6 294 73.5
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 6.8e-117 424.5 296 72.0
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 1.2e-116 423.7 277 78.0
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 1.5e-116 423.3 294 72.4
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 2.0e-116 422.9 294 72.8
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 9.9e-116 420.6 287 73.9
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 3.7e-115 418.7 294 72.4
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 3.7e-115 418.7 294 72.4
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.4e-114 416.0 250 83.2
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 2.4e-114 416.0 298 71.5
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 4.1e-114 415.2 294 71.8
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 7.1e-114 414.5 298 71.1
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 1.2e-113 413.7 262 79.4
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 6.0e-113 411.4 294 71.4
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 3.0e-112 409.1 297 71.7
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 8.6e-112 407.5 294 71.8
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 2.5e-111 406.0 297 69.4
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.7e-105 386.0 320 64.7
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 4.7e-102 375.2 297 67.0
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 1.1e-101 374.0 297 68.7
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 2.1e-97 359.8 297 65.3
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 4.3e-95 352.1 219 81.7
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 7.3e-95 351.3 279 68.1
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 7.6e-92 341.3 223 78.0
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 1.6e-89 333.6 223 76.2
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.8e-88 330.1 294 58.2
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 8.7e-88 327.8 291 56.4
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 1.6e-86 323.6 214 74.8
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 2.8e-86 322.8 294 57.1
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 2.8e-86 322.8 294 55.8
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 1.3e-83 313.9 289 56.7
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 8.4e-83 311.2 262 58.8
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 1.1e-82 310.8 223 71.3
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 1.9e-82 310.1 295 55.3
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.0e-80 304.3 275 60.7
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 1.8e-77 293.5 220 67.3
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 2.2e-75 286.6 252 63.5
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 1.1e-71 274.2 256 55.1
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 3.7e-70 269.2 177 78.5
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 4.5e-68 262.3 177 75.7
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 6.5e-59 231.9 150 79.3
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 3.2e-58 229.6 202 60.4
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 7.2e-58 228.4 149 77.2
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 5.7e-55 218.8 162 66.0
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 4.1e-53 212.6 143 69.9
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.9e-51 206.5 135 76.3
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 5.3e-45 185.7 266 39.1
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 3.8e-43 179.5 135 69.6
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 3.2e-42 176.4 182 55.5
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 4.4e-39 166.0 106 79.2
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 7.2e-34 148.7 299 34.1
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 8.0e-33 145.2 131 62.6
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.0e-32 144.8 118 66.1
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 2.0e-31 140.6 99 66.7
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 8.0e-25 118.6 270 28.5
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 2.3e-24 117.1 116 58.6
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 2.4e-21 107.1 81 64.2
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 4.1e-21 106.3 64 84.4
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 4.1e-21 106.3 128 49.2
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 4.3e-18 96.3 103 55.3
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 1.0e-16 91.7 103 53.4
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 3.9e-11 73.2 91 48.4
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 1.4e-08 64.7 39 76.9
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 1.5e-07 61.2 39 71.8
GSVIVG01003362001 Vitis vinifera HOM05D004415 ORTHO05D005198 7.5e-07 58.9 54 55.6
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 9.8e-07 58.5 59 52.5
VMungo0251G3417 Vigna mungo HOM05D004415 ORTHO05D005198 2.2e-06 57.4 32 81.2
GSVIVG01005645001 Vitis vinifera HOM05D004415 ORTHO05D005198 8.3e-06 55.5 54 51.9
GSVIVG01032305001 Vitis vinifera HOM05D004415 ORTHO05D005198 8.3e-06 55.5 54 51.9


User provided reference genes

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