Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0073101 Lupinus albus HOM05D005541 ORTHO05D006875 9.9e-169 596.7 293 100.0
Lalb_Chr08g0233581 Lupinus albus HOM05D005541 ORTHO05D006875 9.3e-143 510.4 294 86.7
Medtr2g450740 Medicago truncatula HOM05D005541 ORTHO05D006875 6.5e-136 487.6 301 78.7
Lj6g0025347 Lotus japonicus HOM05D005541 ORTHO05D006875 7.9e-134 480.7 293 78.8
arahy.Tifrunner.gnm1.ann1.9T6TW9 Arachis hypogaea HOM05D005541 ORTHO05D006875 1.5e-132 476.5 292 78.8
Ca_03100_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 7.4e-132 474.2 301 79.1
arahy.Tifrunner.gnm1.ann1.H1LUDS Arachis hypogaea HOM05D005541 ORTHO05D006875 2.8e-131 472.2 292 78.4
Glyma.15G198100 Glycine max HOM05D005541 ORTHO05D006875 1.3e-128 463.4 294 78.2
Psat1g021320 Pisum sativum HOM05D005541 ORTHO05D006875 1.3e-128 463.4 297 75.8
VMungo1309G2820 Vigna mungo HOM05D005541 ORTHO05D006875 7.2e-127 457.6 297 77.1
Glyma.09G091600 Glycine max HOM05D005541 ORTHO05D006875 9.4e-127 457.2 292 77.7
Phvul.009G212200 Phaseolus vulgaris HOM05D005541 ORTHO05D006875 2.1e-126 456.1 293 76.5
CiPaw.04G177400 Carya illinoinensis HOM05D005541 ORTHO05D006875 7.4e-124 447.6 284 73.9
QL02p090804 Quercus lobata HOM05D005541 ORTHO05D006875 3.7e-123 445.3 290 73.1
Ciclev10009016m.g Citrus clementina HOM05D005541 ORTHO05D006875 1.3e-120 436.8 295 73.9
Cfa002261 Carpinus fangiana HOM05D005541 ORTHO05D006875 5.0e-120 434.9 295 72.2
TWI32G1342 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 1.9e-119 433.0 285 75.4
TWI63G1467 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 1.9e-119 433.0 287 74.6
TWI63G0008 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 7.2e-119 431.0 287 74.2
Atru.chr7.2014 Acer truncatum HOM05D005541 ORTHO05D006875 2.1e-118 429.5 290 70.7
Thecc.09G137600 Theobroma cacao HOM05D005541 ORTHO05D006875 1.4e-117 426.8 291 71.8
Dinv36447 Davidia involucrata HOM05D005541 ORTHO05D006875 1.8e-117 426.4 302 70.5
PGR142G4414 Punica granatum HOM05D005541 ORTHO05D006875 3.9e-117 425.2 289 72.3
Cc06_g07640 Coffea canephora HOM05D005541 ORTHO05D006875 5.2e-117 424.9 282 73.0
Manes.14G119600 Manihot esculenta HOM05D005541 ORTHO05D006875 1.1e-116 423.7 286 70.3
Rhsim03G0253300 Rhododendron simsii HOM05D005541 ORTHO05D006875 2.0e-116 422.9 291 71.1
GSVIVG01012859001 Vitis vinifera HOM05D005541 ORTHO05D006875 2.6e-116 422.5 289 70.6
vmacro06115 Vaccinium macrocarpon HOM05D005541 ORTHO05D006875 1.7e-115 419.9 273 72.5
RcHm_v2.0_Chr2g0087061 Rosa chinensis HOM05D005541 ORTHO05D006875 2.2e-115 419.5 287 71.1
Potri.018G118200 Populus trichocarpa HOM05D005541 ORTHO05D006875 4.8e-115 418.3 289 70.6
FvH4_1g02000 Fragaria vesca HOM05D005541 ORTHO05D006875 1.6e-113 413.3 290 70.0
Potri.006G061600 Populus trichocarpa HOM05D005541 ORTHO05D006875 3.5e-113 412.1 298 68.1
Sabra06G0044200 Salix brachista HOM05D005541 ORTHO05D006875 5.9e-113 411.4 298 68.5
FAN26G0160 Fragaria x ananassa HOM05D005541 ORTHO05D006875 1.3e-112 410.2 293 68.9
ClCG06G011880 Citrullus lanatus HOM05D005541 ORTHO05D006875 1.7e-112 409.8 290 69.0
Gorai.004G109500 Gossypium raimondii HOM05D005541 ORTHO05D006875 1.7e-112 409.8 291 69.4
Duzib168G0734 Durio zibethinus HOM05D005541 ORTHO05D006875 3.8e-112 408.7 271 72.7
MD15G1162200 Malus domestica HOM05D005541 ORTHO05D006875 3.8e-112 408.7 287 69.0
FAN28G0031 Fragaria x ananassa HOM05D005541 ORTHO05D006875 5.0e-112 408.3 290 69.0
Gorai.013G236700 Gossypium raimondii HOM05D005541 ORTHO05D006875 6.5e-112 407.9 288 70.1
Cpa.g.sc46.69 Carica papaya HOM05D005541 ORTHO05D006875 1.1e-111 407.1 284 69.4
Gohir.D13G207800 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.1e-111 407.1 272 73.2
Gohir.A13G202000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.5e-111 406.8 272 72.8
TAR100G0002 Trochodendron aralioides HOM05D005541 ORTHO05D006875 1.9e-111 406.4 296 66.6
TAR170G0003 Trochodendron aralioides HOM05D005541 ORTHO05D006875 1.9e-111 406.4 296 66.6
CsaV3_1G028340 Cucumis sativus L. HOM05D005541 ORTHO05D006875 2.5e-111 406.0 291 68.4
MELO3C010277.2 Cucumis melo HOM05D005541 ORTHO05D006875 9.4e-111 404.1 291 68.0
Lsat_1_v5_gn_7_46800 Lactuca sativa HOM05D005541 ORTHO05D006875 1.2e-110 403.7 286 68.2
Gohir.A08G090600 Gossypium hirsutum HOM05D005541 ORTHO05D006875 6.1e-110 401.4 291 68.4
MD02G1018200 Malus domestica HOM05D005541 ORTHO05D006875 8.0e-110 401.0 288 68.8
CANSAT11G2438 Cannabis sativa HOM05D005541 ORTHO05D006875 1.4e-109 400.2 287 65.9
SGA_v2.0_scaffold45G17077 Striga asiatica HOM05D005541 ORTHO05D006875 1.8e-109 399.8 271 72.3
Migut.J01236 Erythranthe guttata HOM05D005541 ORTHO05D006875 2.3e-109 399.4 272 72.4
Peaxi162Scf00088g00520 Petunia axillaris HOM05D005541 ORTHO05D006875 2.3e-109 399.4 293 65.9
ECA240G1064 Erigeron canadensis HOM05D005541 ORTHO05D006875 4.0e-109 398.7 290 66.2
Sed0021107 Sechium edule HOM05D005541 ORTHO05D006875 4.0e-109 398.7 292 66.8
Actinidia14228 Actinidia chinensis HOM05D005541 ORTHO05D006875 1.2e-108 397.1 259 72.6
HanXRQChr03g0063361 Helianthus annuus HOM05D005541 ORTHO05D006875 1.5e-108 396.7 280 68.2
Aqoxy7G03592 Aquilegia oxysepala HOM05D005541 ORTHO05D006875 2.6e-108 396.0 281 67.3
Nn8g39653 Nelumbo nucifera HOM05D005541 ORTHO05D006875 2.6e-108 396.0 282 67.4
Sopen07g003450 Solanum pennellii HOM05D005541 ORTHO05D006875 4.4e-108 395.2 284 67.3
Sed0001591 Sechium edule HOM05D005541 ORTHO05D006875 5.7e-108 394.8 287 67.2
Solyc07g007380.4 Solanum lycopersicum HOM05D005541 ORTHO05D006875 7.5e-108 394.4 284 66.9
Nitab4.5_0002845g0020 Nicotiana tabacum HOM05D005541 ORTHO05D006875 2.2e-107 392.9 290 64.5
Actinidia26358 Actinidia chinensis HOM05D005541 ORTHO05D006875 2.8e-107 392.5 276 69.9
Prupe.7G257600 Prunus persica HOM05D005541 ORTHO05D006875 2.8e-107 392.5 292 65.1
Nitab4.5_0002286g0050 Nicotiana tabacum HOM05D005541 ORTHO05D006875 1.1e-106 390.6 290 64.5
MSTRG.6077 Avicennia marina HOM05D005541 ORTHO05D006875 2.0e-105 386.3 278 69.4
PGSC0003DMG400030689 Solanum tuberosum HOM05D005541 ORTHO05D006875 2.7e-105 386.0 283 66.1
CAN.G1281.6 Capsicum annuum HOM05D005541 ORTHO05D006875 4.5e-105 385.2 251 70.5
Lj7A439T20 Lonicera japonica HOM05D005541 ORTHO05D006875 9.4e-103 377.5 231 77.1
Oeu012222.1 Olea europaea HOM05D005541 ORTHO05D006875 1.6e-102 376.7 293 63.8
DCAR_009345 Daucus carota HOM05D005541 ORTHO05D006875 2.1e-102 376.3 284 68.0
HanXRQChr09g0241861 Helianthus annuus HOM05D005541 ORTHO05D006875 2.7e-102 375.9 288 64.6
AUR62020012 Chenopodium quinoa HOM05D005541 ORTHO05D006875 3.6e-102 375.6 262 67.6
AUR62011221 Chenopodium quinoa HOM05D005541 ORTHO05D006875 1.4e-101 373.6 290 61.7
Sc08g0006020 Simmondsia chinensis HOM05D005541 ORTHO05D006875 1.5e-100 370.2 263 65.4
Duzib187G1717 Durio zibethinus HOM05D005541 ORTHO05D006875 4.4e-100 368.6 246 72.4
Dinv41444 Davidia involucrata HOM05D005541 ORTHO05D006875 9.8e-100 367.5 224 76.3
Gohir.D08G101500 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.3e-99 367.1 291 65.6
Haze_25444 Corylus avellana HOM05D005541 ORTHO05D006875 1.1e-98 364.0 294 63.3
Hund09308 Selenicereus undatus HOM05D005541 ORTHO05D006875 4.5e-97 358.6 252 66.3
THA.LOC104808948 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 5.0e-96 355.1 282 57.8
Eucgr.C00480 Eucalyptus grandis HOM05D005541 ORTHO05D006875 7.2e-95 351.3 297 61.6
Gohir.D13G208000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.0e-93 347.4 207 78.7
PSO478G5201 Papaver somniferum HOM05D005541 ORTHO05D006875 5.2e-93 345.1 293 59.0
MBI15_g25760_MAGBIO Magnolia biondii HOM05D005541 ORTHO05D006875 1.2e-92 344.0 380 47.1
ATR0767G116 Amborella trichopoda HOM05D005541 ORTHO05D006875 2.0e-92 343.2 292 58.2
THA.LOC104815290 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 9.8e-92 340.9 291 57.4
COL.COLO4_33365 Corchorus olitorius HOM05D005541 ORTHO05D006875 2.2e-91 339.7 241 69.3
CSS0024399 Camellia sinensis var. sinensis HOM05D005541 ORTHO05D006875 8.3e-91 337.8 226 73.9
PSO017G3833 Papaver somniferum HOM05D005541 ORTHO05D006875 8.3e-91 337.8 261 62.5
Ah.09g224130 Amaranthus hybridus HOM05D005541 ORTHO05D006875 1.5e-87 327.0 223 66.4
CDE02G2611 Ceratophyllum demersum HOM05D005541 ORTHO05D006875 1.5e-87 327.0 255 58.0
HPP92_020539 Vanilla planifolia HOM05D005541 ORTHO05D006875 4.3e-87 325.5 282 54.3
EL10Ac8g18781 Beta vulgaris HOM05D005541 ORTHO05D006875 1.4e-85 320.5 230 64.3
AT5G35080 Arabidopsis thaliana HOM05D005541 ORTHO05D006875 2.6e-84 316.2 285 55.8
BcaB02g10581 Brassica carinata HOM05D005541 ORTHO05D006875 1.1e-82 310.8 281 54.8
Sp4g15930 Schrenkiella parvula HOM05D005541 ORTHO05D006875 7.0e-82 308.1 269 56.5
BcaC02g11442 Brassica carinata HOM05D005541 ORTHO05D006875 9.2e-82 307.8 272 56.6
C04p15500 Brassica napus HOM05D005541 ORTHO05D006875 9.2e-82 307.8 272 56.6
BolC4t23121H Brassica oleracea HOM05D005541 ORTHO05D006875 9.2e-82 307.8 272 56.6
Aa31LG10G11810 Aethionema arabicum HOM05D005541 ORTHO05D006875 3.5e-81 305.8 243 62.1
Carub.0007s3085 Capsella rubella HOM05D005541 ORTHO05D006875 7.8e-81 304.7 286 54.2
BraA05t20138Z Brassica rapa HOM05D005541 ORTHO05D006875 1.0e-80 304.3 269 55.4
A05p11950 Brassica napus HOM05D005541 ORTHO05D006875 2.3e-80 303.1 269 55.4
Thhalv10002066m.g Eutrema salsugineum HOM05D005541 ORTHO05D006875 2.3e-80 303.1 276 54.7
BcaB01g03929 Brassica carinata HOM05D005541 ORTHO05D006875 1.1e-79 300.8 287 53.3
BolC3t14579H Brassica oleracea HOM05D005541 ORTHO05D006875 2.5e-79 299.7 279 54.5
Actinidia38706 Actinidia chinensis HOM05D005541 ORTHO05D006875 4.7e-78 295.4 219 67.1
C03p21960 Brassica napus HOM05D005541 ORTHO05D006875 4.7e-78 295.4 262 55.7
FAN19G0623 Fragaria x ananassa HOM05D005541 ORTHO05D006875 2.3e-77 293.1 209 68.9
Oeu028018.1 Olea europaea HOM05D005541 ORTHO05D006875 6.8e-77 291.6 257 58.4
Zm00001eb028460 Zea mays HOM05D005541 ORTHO05D006875 2.2e-75 286.6 246 53.7
Pp3c2_6810 Physcomitrium patens HOM05D005541 ORTHO05D006875 1.6e-73 280.4 231 56.7
CARHR217140 Cardamine hirsuta HOM05D005541 ORTHO05D006875 3.6e-70 269.2 217 59.4
Pp3c1_27810 Physcomitrium patens HOM05D005541 ORTHO05D006875 2.0e-68 263.5 255 51.8
BcaC01g05834 Brassica carinata HOM05D005541 ORTHO05D006875 5.8e-68 261.9 229 55.5
Zm00001eb136970 Zea mays HOM05D005541 ORTHO05D006875 1.4e-61 240.7 194 56.7
Mapoly0020s0022 Marchantia polymorpha HOM05D005541 ORTHO05D006875 3.2e-58 229.6 276 45.7
SMO174G0227 Selaginella moellendorffii HOM05D005541 ORTHO05D006875 1.2e-57 227.6 231 48.5
unitig_0.g507 Utricularia gibba HOM05D005541 ORTHO05D006875 4.3e-55 219.2 153 66.7
AagrBONN_evm.TU.Sc2ySwM_228.2742 Anthoceros agrestis HOM05D005541 ORTHO05D006875 6.4e-51 205.3 261 41.4
Oeu028135.2 Olea europaea HOM05D005541 ORTHO05D006875 1.1e-50 204.5 189 57.7
CBR_g45403 Chara braunii HOM05D005541 ORTHO05D006875 7.9e-41 171.8 284 37.3
SEGI_36543 Sequoiadendron giganteum HOM05D005541 ORTHO05D006875 7.9e-41 171.8 148 58.8
Ca_27153_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 8.7e-32 141.7 97 72.2
Os06g0644800 Oryza sativa ssp. japonica HOM05D005541 ORTHO05D006875 3.7e-30 136.3 132 49.2
MCO11G854 Micromonas commoda HOM05D005541 ORTHO05D006875 6.9e-29 132.1 207 33.8
Cre06.g257900 Chlamydomonas reinhardtii HOM05D005541 ORTHO05D006875 5.7e-23 112.5 174 39.1
Ca_24194_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.7e-23 112.5 108 58.3
PRCOL_00001292 Prasinoderma coloniale HOM05D005541 ORTHO05D006875 1.8e-21 107.5 142 38.7
RcHm_v2.0_Chr1g0314561 Rosa chinensis HOM05D005541 ORTHO05D006875 7.7e-20 102.1 79 64.6
RcHm_v2.0_Chr5g0069501 Rosa chinensis HOM05D005541 ORTHO05D006875 1.5e-15 87.8 55 69.1
HanXRQChr03g0068961 Helianthus annuus HOM05D005541 ORTHO05D006875 6.3e-14 82.4 48 81.2
RcHm_v2.0_Chr7g0241391 Rosa chinensis HOM05D005541 ORTHO05D006875 1.5e-12 77.8 45 73.3
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 1.7e-11 74.3 52 63.5
FvH4_1g02060 Fragaria vesca HOM05D005541 ORTHO05D006875 5.1e-08 62.8 40 65.0


User provided reference genes

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