Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0072941 Lupinus albus HOM05D000042 ORTHO05D036532 3.0e-24 114.4 58 100.0
Lalb_Chr08g0233801 Lupinus albus HOM05D000042 ORTHO05D036532 7.0e-18 93.2 53 86.8
VMungo0251G0256 Vigna mungo HOM05D000042 ORTHO05D000980 2.5e-15 84.7 49 83.7
Phvul.003G003800 Phaseolus vulgaris HOM05D000042 ORTHO05D000980 5.6e-15 83.6 49 81.6
Glyma.20G001900 Glycine max HOM05D000042 ORTHO05D000980 1.5e-12 75.5 49 75.5
Psat6g099720 Pisum sativum HOM05D000042 ORTHO05D000980 1.5e-12 75.5 49 73.5
Ca_12406_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000980 5.8e-12 73.6 49 73.5
Glyma.09G283800 Glycine max HOM05D000042 ORTHO05D000980 9.8e-12 72.8 48 77.1
arahy.Tifrunner.gnm1.ann1.3Z25D4 Arachis hypogaea HOM05D000042 ORTHO05D000980 1.7e-11 72.0 49 69.4
arahy.Tifrunner.gnm1.ann1.40TXUY Arachis hypogaea HOM05D000042 ORTHO05D000980 2.9e-11 71.2 50 64.0
Medtr1g038300 Medicago truncatula HOM05D000042 ORTHO05D000980 6.4e-11 70.1 49 67.3
arahy.Tifrunner.gnm1.ann1.SP53YQ Arachis hypogaea HOM05D000042 ORTHO05D000980 1.1e-10 69.3 50 70.0
arahy.Tifrunner.gnm1.ann1.E6J81H Arachis hypogaea HOM05D000042 ORTHO05D000980 2.4e-10 68.2 49 69.4
Psat5g104920 Pisum sativum HOM05D000042 ORTHO05D036532 2.4e-10 68.2 49 65.3
arahy.Tifrunner.gnm1.ann1.YR30XE Arachis hypogaea HOM05D000042 ORTHO05D000980 4.1e-10 67.4 46 67.4
Lj2g0025010 Lotus japonicus HOM05D000042 ORTHO05D000980 1.2e-09 65.9 49 65.3
TPR.G29778 Trifolium pratense HOM05D000042 ORTHO05D000980 2.1e-09 65.1 50 60.0
CiPaw.05G170200 Carya illinoinensis HOM05D000042 ORTHO05D000980 6.0e-09 63.5 46 63.0
Manes.04G061414 Manihot esculenta HOM05D000042 ORTHO05D000980 1.7e-08 62.0 49 57.1
Haze_11770 Corylus avellana HOM05D000451 ORTHO05D000351 3.0e-08 61.2 51 58.8
Cfa008755 Carpinus fangiana HOM05D000042 ORTHO05D000980 6.6e-08 60.1 50 60.0
Manes.11G102300 Manihot esculenta HOM05D000042 ORTHO05D000980 6.6e-08 60.1 49 55.1
MD10G1231100 Malus domestica HOM05D000042 ORTHO05D000980 8.6e-08 59.7 49 53.1
Gohir.A13G061100 Gossypium hirsutum HOM05D000042 ORTHO05D000980 1.5e-07 58.9 49 55.1
CiPaw.06G061600 Carya illinoinensis HOM05D000042 ORTHO05D000980 1.9e-07 58.5 46 60.9
Ciclev10032489m.g Citrus clementina HOM05D000042 ORTHO05D000980 2.5e-07 58.2 49 55.1
Prupe.4G113500 Prunus persica HOM05D000042 ORTHO05D000980 2.5e-07 58.2 49 51.0
Duzib132G0305 Durio zibethinus HOM05D000042 ORTHO05D000980 4.3e-07 57.4 49 55.1
Thecc.02G157800 Theobroma cacao HOM05D000042 ORTHO05D000980 4.3e-07 57.4 49 53.1
Gohir.A04G108400 Gossypium hirsutum HOM05D000042 ORTHO05D000980 5.6e-07 57.0 49 53.1
Gohir.D04G148000 Gossypium hirsutum HOM05D000042 ORTHO05D000980 5.6e-07 57.0 49 53.1
Duzib248G1578 Durio zibethinus HOM05D000042 ORTHO05D000980 7.3e-07 56.6 49 53.1
Gohir.D13G060800 Gossypium hirsutum HOM05D000042 ORTHO05D000980 9.5e-07 56.2 49 53.1
Gorai.013G069000 Gossypium raimondii HOM05D000042 ORTHO05D000980 9.5e-07 56.2 49 53.1
Potri.007G073000 Populus trichocarpa HOM05D000042 ORTHO05D000980 9.5e-07 56.2 49 53.1
COL.COLO4_33054 Corchorus olitorius HOM05D000042 ORTHO05D000980 1.6e-06 55.5 49 51.0
Dinv14682 Davidia involucrata HOM05D000042 ORTHO05D000980 1.6e-06 55.5 52 48.1
MD05G1250100 Malus domestica HOM05D000042 ORTHO05D000980 1.6e-06 55.5 49 46.9
FAN21G1321 Fragaria x ananassa HOM05D002062 ORTHO05D000980 2.8e-06 54.7 46 52.2
FvH4_3g12460 Fragaria vesca HOM05D000042 ORTHO05D000980 3.6e-06 54.3 46 52.2
FAN16G2530 Fragaria x ananassa HOM05D000042 ORTHO05D000980 3.6e-06 54.3 46 52.2
FAN25G2727 Fragaria x ananassa HOM05D000042 ORTHO05D000980 3.6e-06 54.3 46 52.2
RcHm_v2.0_Chr5g0020391 Rosa chinensis HOM05D000042 ORTHO05D000980 3.6e-06 54.3 46 52.2
Dinv27271 Davidia involucrata HOM05D000042 ORTHO05D000980 4.7e-06 53.9 52 46.2
QL11p013875 Quercus lobata HOM05D000042 ORTHO05D000980 4.7e-06 53.9 48 47.9
SGA_v2.0_scaffold52G18923 Striga asiatica HOM05D000042 ORTHO05D000980 4.7e-06 53.9 49 44.9
CAN.G716.8 Capsicum annuum HOM05D000042 ORTHO05D000980 6.2e-06 53.5 47 44.7
Peaxi162Scf00066g00133 Petunia axillaris HOM05D000042 ORTHO05D000980 6.2e-06 53.5 50 42.0
Duzib052G1119 Durio zibethinus HOM05D000042 ORTHO05D000980 8.1e-06 53.1 49 49.0
GSVIVG01012110001 Vitis vinifera HOM05D000042 ORTHO05D000980 8.1e-06 53.1 49 44.9


User provided reference genes

Program Settings