Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0072911 Lupinus albus HOM05D001925 ORTHO05D004257 3.4e-115 418.3 208 100.0
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 3.0e-79 298.9 315 54.9
Ca_07929_v3 Cicer arietinum L. HOM05D001925 ORTHO05D004257 2.2e-69 266.2 309 49.8
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 1.2e-67 260.4 316 48.7
Glyma.09G258600 Glycine max HOM05D001925 ORTHO05D004257 2.7e-67 259.2 316 49.1
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 1.5e-65 253.4 316 48.1
TPR.G37799 Trifolium pratense HOM05D001925 ORTHO05D004257 9.5e-65 250.8 314 47.1
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 2.8e-64 249.2 316 47.2
Medtr7g077860 Medicago truncatula HOM05D001925 ORTHO05D004257 5.4e-60 235.0 316 44.6
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 1.3e-58 230.3 314 46.5
Lj1g0025308 Lotus japonicus HOM05D001925 ORTHO05D004257 1.3e-58 230.3 318 45.3
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 2.9e-58 229.2 316 46.5
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 1.1e-52 210.7 312 43.9
CiPaw.01G062900 Carya illinoinensis HOM05D001925 ORTHO05D004257 2.7e-51 206.1 270 47.4
Psat3g108000 Pisum sativum HOM05D001925 ORTHO05D004257 1.9e-49 199.9 282 44.3
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 3.1e-47 192.6 307 40.4
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 6.8e-47 191.4 309 38.8
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 2.0e-46 189.9 307 39.4
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 1.3e-45 187.2 317 39.1
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 1.4e-44 183.7 305 39.3
arahy.Tifrunner.gnm1.ann1.2X3TQS Arachis hypogaea HOM05D001925 ORTHO05D004257 1.9e-44 183.3 302 42.4
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 1.9e-44 183.3 293 41.6
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 4.1e-44 182.2 318 39.3
GSVIVG01026948001 Vitis vinifera HOM05D001925 ORTHO05D004257 7.0e-44 181.4 242 47.9
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 2.1e-43 179.9 318 37.1
Cpa.g.sc11.19 Carica papaya HOM05D001925 ORTHO05D004257 2.7e-43 179.5 292 41.8
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 2.7e-43 179.5 305 39.0
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 6.0e-43 178.3 306 38.2
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 1.3e-42 177.2 278 41.0
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 5.1e-42 175.3 316 38.0
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 6.6e-42 174.9 305 38.4
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 1.9e-41 173.3 312 40.7
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 2.5e-41 172.9 314 36.6
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 2.5e-41 172.9 314 39.5
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 5.6e-41 171.8 303 37.6
Eucgr.D02304 Eucalyptus grandis HOM05D001925 ORTHO05D004257 7.3e-41 171.4 308 38.3
Sabra14G0062300 Salix brachista HOM05D001925 ORTHO05D004257 9.5e-41 171.0 312 38.1
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 9.5e-41 171.0 320 37.2
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 2.1e-40 169.9 285 40.4
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 6.2e-40 168.3 299 38.5
MD01G1065100 Malus domestica HOM05D001925 ORTHO05D004257 6.2e-40 168.3 326 36.5
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 8.1e-40 167.9 285 39.6
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 8.1e-40 167.9 292 39.4
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 6.8e-39 164.9 315 38.1
MD07G1135300 Malus domestica HOM05D001925 ORTHO05D004257 6.8e-39 164.9 320 36.2
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 8.9e-39 164.5 319 36.7
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 1.2e-38 164.1 336 33.3
Potri.014G086000 Populus trichocarpa HOM05D001925 ORTHO05D004257 1.2e-38 164.1 312 37.2
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 1.5e-38 163.7 311 37.3
Sabra02G0127500 Salix brachista HOM05D001925 ORTHO05D004257 1.5e-38 163.7 306 37.6
PGR031G2850 Punica granatum HOM05D001925 ORTHO05D004257 2.0e-38 163.3 302 36.1
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 3.4e-38 162.5 314 38.2
Potri.002G160700 Populus trichocarpa HOM05D001925 ORTHO05D004257 3.4e-38 162.5 310 36.8
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 5.8e-38 161.8 310 37.7
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 7.5e-38 161.4 314 37.9
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 7.5e-38 161.4 314 37.9
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 7.5e-38 161.4 314 37.9
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.2e-37 159.8 314 37.9
MBI18_g02843_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 3.7e-37 159.1 319 35.4
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 4.9e-37 158.7 321 35.2
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 6.4e-37 158.3 312 37.5
Nn6g33385 Nelumbo nucifera HOM05D001925 ORTHO05D004257 1.4e-36 157.1 321 34.9
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 3.2e-36 156.0 314 37.6
Carub.0004s2868 Capsella rubella HOM05D001925 ORTHO05D004257 4.1e-36 155.6 269 40.9
THA.LOC104825845 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 5.4e-36 155.2 272 37.5
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 7.1e-36 154.8 306 35.3
Nn1g01562 Nelumbo nucifera HOM05D001925 ORTHO05D004257 9.2e-36 154.5 319 34.5
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 9.2e-36 154.5 309 35.0
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 1.6e-35 153.7 307 36.5
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 1.6e-35 153.7 312 35.6
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 1.6e-35 153.7 278 34.9
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 2.1e-35 153.3 272 37.1
AL4G45210 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 2.7e-35 152.9 267 39.7
Sed0006621 Sechium edule HOM05D001925 ORTHO05D004257 3.5e-35 152.5 299 38.8
Sc26g0000880 Simmondsia chinensis HOM05D001925 ORTHO05D004257 4.6e-35 152.1 276 36.6
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 1.7e-34 150.2 265 38.5
ClCG05G001470 Citrullus lanatus HOM05D001925 ORTHO05D004257 2.3e-34 149.8 308 36.7
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 3.9e-34 149.1 336 33.3
Sp4g28050 Schrenkiella parvula HOM05D001925 ORTHO05D004257 8.6e-34 147.9 272 39.3
AT2G45980 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 1.1e-33 147.5 261 40.6
Thhalv10001583m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 1.1e-33 147.5 276 37.7
CARHR141250 Cardamine hirsuta HOM05D001925 ORTHO05D004257 1.5e-33 147.1 261 38.7
Aa31LG5G590 Aethionema arabicum HOM05D001925 ORTHO05D004257 1.9e-33 146.7 296 34.8
CsaV3_3G008850 Cucumis sativus L. HOM05D001925 ORTHO05D004257 1.9e-33 146.7 301 38.9
Aa31LG1G27390 Aethionema arabicum HOM05D001925 ORTHO05D004257 3.3e-33 146.0 250 39.2
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 4.3e-33 145.6 312 33.7
MELO3C006104.2 Cucumis melo HOM05D001925 ORTHO05D004257 7.3e-33 144.8 299 38.1
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.6e-32 143.7 287 36.9
A05p05970 Brassica napus HOM05D001925 ORTHO05D004257 3.6e-32 142.5 241 41.1
BraA05t19560Z Brassica rapa HOM05D001925 ORTHO05D004257 3.6e-32 142.5 246 41.5
THA.LOC104802035 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 3.6e-32 142.5 248 37.9
unitig_749.g13536 Utricularia gibba HOM05D001925 ORTHO05D004257 1.1e-31 141.0 286 36.0
PGR042G2528 Punica granatum HOM05D001925 ORTHO05D004257 1.4e-31 140.6 325 35.4
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.8e-31 140.2 284 37.3
Oeu061351.3 Olea europaea HOM05D001925 ORTHO05D004257 5.2e-31 138.7 232 40.9
Sed0020685 Sechium edule HOM05D001925 ORTHO05D004257 6.8e-31 138.3 292 37.3
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 8.9e-31 137.9 281 36.3
C04p06900 Brassica napus HOM05D001925 ORTHO05D004257 1.2e-30 137.5 255 37.6
BolC4t22311H Brassica oleracea HOM05D001925 ORTHO05D004257 1.2e-30 137.5 255 37.6
THA.LOC104817027 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 1.2e-30 137.5 246 38.2
Rhsim01G0159000 Rhododendron simsii HOM05D001925 ORTHO05D004257 2.0e-30 136.7 243 39.9
Nitab4.5_0000386g0060 Nicotiana tabacum HOM05D001925 ORTHO05D004257 3.4e-30 136.0 311 34.4
Nitab4.5_0008206g0010 Nicotiana tabacum HOM05D001925 ORTHO05D004257 5.8e-30 135.2 311 32.5
Lj6A572T61 Lonicera japonica HOM05D001925 ORTHO05D004257 2.2e-29 133.3 145 45.5
BolC4t28695H Brassica oleracea HOM05D001925 ORTHO05D004257 2.9e-29 132.9 236 37.3
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 3.8e-29 132.5 295 33.6
Sopen10g006250 Solanum pennellii HOM05D001925 ORTHO05D004257 3.8e-29 132.5 309 33.7
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 4.9e-29 132.1 307 31.9
Thhalv10029186m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 8.4e-29 131.3 289 34.9
Sc23g0002810 Simmondsia chinensis HOM05D001925 ORTHO05D004257 8.4e-29 131.3 230 40.0
C04p71970 Brassica napus HOM05D001925 ORTHO05D004257 1.1e-28 131.0 230 39.1
TAR636G0324 Trochodendron aralioides HOM05D001925 ORTHO05D004257 4.2e-28 129.0 261 36.8
Sp6g00430 Schrenkiella parvula HOM05D001925 ORTHO05D004257 1.2e-27 127.5 292 33.9
THA.LOC104817300 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 1.6e-27 127.1 274 34.7
Solyc10g012420.3 Solanum lycopersicum HOM05D001925 ORTHO05D004257 3.5e-27 125.9 174 41.4
PSO478G2649 Papaver somniferum HOM05D001925 ORTHO05D004257 7.8e-27 124.8 289 34.9
AL6G53090 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 1.3e-26 124.0 279 35.1
CARHR248450 Cardamine hirsuta HOM05D001925 ORTHO05D004257 1.3e-26 124.0 270 34.8
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 2.3e-26 123.2 280 33.2
Carub.0006s3688 Capsella rubella HOM05D001925 ORTHO05D004257 2.3e-26 123.2 275 34.2
Medtr2g027720 Medicago truncatula HOM05D001925 ORTHO05D004257 3.9e-26 122.5 232 37.5
Aqoxy7G00278 Aquilegia oxysepala HOM05D001925 ORTHO05D004257 5.1e-26 122.1 317 29.7
Peaxi162Scf00008g02423 Petunia axillaris HOM05D001925 ORTHO05D004257 5.1e-26 122.1 310 32.9
AT4G00355 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 8.7e-26 121.3 262 35.1
Hund27265 Selenicereus undatus HOM05D001925 ORTHO05D004257 8.7e-26 121.3 141 48.2
Ah.05g180510 Amaranthus hybridus HOM05D001925 ORTHO05D004257 1.9e-25 120.2 326 31.3
PSO782G1204 Papaver somniferum HOM05D001925 ORTHO05D004257 1.9e-25 120.2 286 34.3
A04p34180 Brassica napus HOM05D001925 ORTHO05D004257 4.3e-25 119.0 238 36.6
BraA04t18879Z Brassica rapa HOM05D001925 ORTHO05D004257 4.3e-25 119.0 238 36.6
AUR62022581 Chenopodium quinoa HOM05D001925 ORTHO05D004257 2.1e-24 116.7 177 43.5
ECA236G3632 Erigeron canadensis HOM05D001925 ORTHO05D004257 3.6e-24 115.9 283 32.2
Eucgr.E00120 Eucalyptus grandis HOM05D001925 ORTHO05D004257 3.6e-24 115.9 262 33.2
CAN.G116.9 Capsicum annuum HOM05D001925 ORTHO05D004257 8.1e-24 114.8 178 39.3
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 1.1e-23 114.4 260 37.7
HanXRQChr13g0426611 Helianthus annuus HOM05D001925 ORTHO05D004257 6.9e-23 111.7 99 53.5
MBI17_g35262_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 1.2e-22 110.9 107 52.3
PSO017G3573 Papaver somniferum HOM05D001925 ORTHO05D004257 2.0e-22 110.2 296 31.1
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 2.6e-22 109.8 303 28.1
A03p32220 Brassica napus HOM05D001925 ORTHO05D004257 9.9e-22 107.8 275 31.3
BraA03t12392Z Brassica rapa HOM05D001925 ORTHO05D004257 9.9e-22 107.8 275 31.3
HPP92_025783 Vanilla planifolia HOM05D001925 ORTHO05D004257 9.9e-22 107.8 259 31.3
ATR0680G064 Amborella trichopoda HOM05D001925 ORTHO05D004257 3.8e-21 105.9 312 30.4
PGSC0003DMG400006504 Solanum tuberosum HOM05D001925 ORTHO05D004257 3.8e-21 105.9 278 33.1
BcaC01g06884 Brassica carinata HOM05D001925 ORTHO05D004257 8.4e-21 104.8 269 31.2
C03p39260 Brassica napus HOM05D001925 ORTHO05D004257 1.4e-20 104.0 271 30.6
PSO063G1799 Papaver somniferum HOM05D001925 ORTHO05D004257 1.4e-20 104.0 298 29.2
Lsat_1_v5_gn_7_4301 Lactuca sativa HOM05D001925 ORTHO05D004257 1.9e-20 103.6 284 29.2
SalBow3G4075 Salvia bowleyana HOM05D001925 ORTHO05D004257 1.9e-20 103.6 310 29.0
SGA_v2.0_scaffold55G19707 Striga asiatica HOM05D001925 ORTHO05D004257 1.9e-20 103.6 225 35.6
MBI17_g42624_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 2.4e-20 103.2 148 41.9
BcaB01g02169 Brassica carinata HOM05D001925 ORTHO05D004257 3.2e-20 102.8 265 31.7
BolC3t16197H Brassica oleracea HOM05D001925 ORTHO05D004257 7.1e-20 101.7 270 30.4
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 2.7e-19 99.8 276 29.0
CDE05G2831 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 1.7e-18 97.1 175 37.7
EL10Ac1g00401 Beta vulgaris HOM05D001925 ORTHO05D004257 3.0e-18 96.3 116 47.4
Migut.B01767 Erythranthe guttata HOM05D001925 ORTHO05D004257 3.9e-18 95.9 291 30.2
CDE08G0634 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 5.1e-18 95.5 110 46.4
AUR62004372 Chenopodium quinoa HOM05D001925 ORTHO05D004257 8.7e-18 94.7 166 41.6
HPP92_014720 Vanilla planifolia HOM05D001925 ORTHO05D004257 2.5e-17 93.2 297 27.9
Mapoly0022s0094 Marchantia polymorpha HOM05D001925 ORTHO05D004257 3.4e-14 82.8 94 46.8
unitig_8.g3798 Utricularia gibba HOM05D001925 ORTHO05D004257 3.4e-14 82.8 300 29.0
Zm00001eb191080 Zea mays HOM05D001925 ORTHO05D004257 7.1e-12 75.1 264 29.2
Lj6C572T1 Lonicera japonica HOM05D001925 ORTHO05D004257 7.9e-11 71.6 60 61.7
C04p06870 Brassica napus HOM05D001925 ORTHO05D004257 1.0e-10 71.2 65 58.5
BolC4t22309H Brassica oleracea HOM05D001925 ORTHO05D004257 1.0e-10 71.2 65 58.5
A05p05940 Brassica napus HOM05D001925 ORTHO05D004257 1.8e-10 70.5 63 58.7
BraA05t19557Z Brassica rapa HOM05D001925 ORTHO05D004257 1.8e-10 70.5 63 58.7
HanXRQChr04g0121161 Helianthus annuus HOM05D001925 ORTHO05D004257 3.9e-10 69.3 156 31.4
Os04g0165300 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 5.1e-10 68.9 254 28.3
SGA_v2.0_scaffold95G28831 Striga asiatica HOM05D001925 ORTHO05D004257 1.1e-09 67.8 194 29.4
SMO112G0035 Selaginella moellendorffii HOM05D001925 ORTHO05D004257 2.5e-09 66.6 89 41.6
Zm00001eb305930 Zea mays HOM05D001925 ORTHO05D004257 3.3e-09 66.2 122 34.4
Zm00001eb087910 Zea mays HOM05D001925 ORTHO05D004257 4.3e-09 65.9 114 34.2
Zm00001eb415260 Zea mays HOM05D001925 ORTHO05D004257 4.3e-09 65.9 114 34.2
SMO364G0089 Selaginella moellendorffii HOM05D001925 ORTHO05D004257 5.6e-09 65.5 89 41.6
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 9.6e-09 64.7 86 46.5
SEGI_07880 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 1.3e-08 64.3 111 34.2
SGA_v2.0_scaffold4G02300 Striga asiatica HOM05D001925 ORTHO05D004257 1.6e-08 63.9 156 29.5
Zm00001eb318800 Zea mays HOM05D001925 ORTHO05D004257 2.8e-08 63.2 235 27.7
Zm00001eb103050 Zea mays HOM05D001925 ORTHO05D004257 4.8e-08 62.4 229 28.8
Pp3c15_17300 Physcomitrium patens HOM05D001925 ORTHO05D004257 1.8e-07 60.5 117 32.5
Pp3c9_18340 Physcomitrium patens HOM05D001925 ORTHO05D004257 5.3e-07 58.9 87 34.5
Os07g0418200 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 5.8e-06 55.5 117 29.1


User provided reference genes

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