Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 3.6e-64 248.1 121 100.0
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 1.1e-44 183.3 117 75.2
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 3.1e-44 181.8 117 74.4
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 1.7e-42 176.0 121 73.6
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 2.9e-42 175.3 117 73.5
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 1.1e-41 173.3 118 72.0
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 1.9e-41 172.6 121 71.9
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 1.9e-41 172.6 117 71.8
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.5e-41 172.2 117 70.9
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 2.5e-41 172.2 118 72.0
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 2.5e-41 172.2 118 72.0
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 4.2e-41 171.4 118 72.9
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 7.2e-41 170.6 117 70.1
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 7.2e-41 170.6 117 70.1
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 7.2e-41 170.6 117 73.5
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 2.1e-40 169.1 117 70.1
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 6.1e-40 167.5 118 70.3
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 8.0e-40 167.2 117 71.8
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 1.0e-39 166.8 118 69.5
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 1.4e-39 166.4 117 65.8
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 4.0e-39 164.9 119 70.6
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 6.8e-39 164.1 117 70.1
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 6.8e-39 164.1 117 68.4
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 1.2e-38 163.3 118 70.3
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 1.5e-38 162.9 119 72.3
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 1.5e-38 162.9 119 73.1
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.0e-38 162.5 117 66.7
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 2.6e-38 162.2 117 69.2
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 3.4e-38 161.8 119 70.6
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 5.7e-38 161.0 117 69.2
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 9.8e-38 160.2 117 68.4
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 1.3e-37 159.8 117 67.5
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 2.8e-37 158.7 117 66.7
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 2.8e-37 158.7 117 67.5
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 3.7e-37 158.3 117 65.8
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 8.3e-37 157.1 119 70.6
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.8e-36 156.0 120 69.2
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 2.4e-36 155.6 118 64.4
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 3.1e-36 155.2 120 69.2
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 1.6e-35 152.9 117 66.7
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 2.0e-35 152.5 119 65.5
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 2.7e-35 152.1 119 66.4
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 3.5e-35 151.8 117 63.2
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 1.0e-34 150.2 117 65.8
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 1.3e-34 149.8 119 67.2
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 3.8e-34 148.3 117 60.7
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 6.6e-34 147.5 109 67.9
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 1.5e-33 146.4 110 68.2
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 1.5e-33 146.4 117 65.0
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 2.5e-33 145.6 117 63.2
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 5.6e-33 144.4 109 66.1
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 5.6e-33 144.4 117 62.4
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 7.3e-33 144.1 117 59.8
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 9.5e-33 143.7 118 61.9
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 9.5e-33 143.7 117 61.5
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 1.2e-32 143.3 117 59.0
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 4.7e-32 141.4 116 61.2
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 8.0e-32 140.6 119 58.0
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 1.4e-31 139.8 120 59.2
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 1.2e-30 136.7 117 58.1
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 5.7e-30 134.4 117 57.3
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 1.7e-29 132.9 120 59.2
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 1.7e-29 132.9 117 59.8
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 1.8e-28 129.4 117 54.7
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 1.4e-23 113.2 83 68.7
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 3.9e-18 95.1 75 66.7
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 5.6e-17 91.3 118 47.5
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 1.3e-13 80.1 47 74.5
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 9.2e-12 73.9 46 69.6
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 4.6e-11 71.6 237 28.7
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 5.6e-09 64.7 130 41.5


User provided reference genes

Program Settings