Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0072311 Lupinus albus HOM05D001363 ORTHO05D006255 2.1e-91 339.0 169 100.0
Lj6g0018832 Lotus japonicus HOM05D001363 ORTHO05D006255 2.0e-41 172.9 274 39.4
GSVIVG01029206001 Vitis vinifera HOM05D001363 ORTHO05D006255 5.9e-41 171.4 253 43.5
Ca_12655_v3 Cicer arietinum L. HOM05D001363 ORTHO05D006255 8.6e-40 167.5 290 39.3
Lj9P685T22 Lonicera japonica HOM05D001363 ORTHO05D006255 1.9e-39 166.4 290 37.9
CiPaw.08G036500 Carya illinoinensis HOM05D001363 ORTHO05D006255 1.2e-38 163.7 296 38.2
QL02p097661 Quercus lobata HOM05D001363 ORTHO05D006255 1.2e-38 163.7 299 38.5
Psat1g024320 Pisum sativum HOM05D001363 ORTHO05D006255 3.6e-38 162.2 278 39.6
arahy.Tifrunner.gnm1.ann1.YA5C6P Arachis hypogaea HOM05D001363 ORTHO05D006255 6.1e-38 161.4 285 39.6
TAR625G1447 Trochodendron aralioides HOM05D001363 ORTHO05D006255 8.0e-38 161.0 295 35.9
Rhsim03G0264200 Rhododendron simsii HOM05D001363 ORTHO05D006255 2.3e-37 159.5 289 37.7
Cfa013508 Carpinus fangiana HOM05D001363 ORTHO05D006255 3.0e-37 159.1 292 38.0
Manes.01G004820 Manihot esculenta HOM05D001363 ORTHO05D006255 4.0e-37 158.7 303 36.6
CSS0044369 Camellia sinensis var. sinensis HOM05D001363 ORTHO05D006255 5.2e-37 158.3 301 37.5
Haze_22100 Corylus avellana HOM05D001363 ORTHO05D006255 8.9e-37 157.5 292 38.7
arahy.Tifrunner.gnm1.ann1.2PT66T Arachis hypogaea HOM05D001363 ORTHO05D006255 1.2e-36 157.1 283 39.2
Thecc.09G173000 Theobroma cacao HOM05D001363 ORTHO05D006255 1.2e-36 157.1 297 36.4
Nn2g12720 Nelumbo nucifera HOM05D001363 ORTHO05D006255 2.0e-36 156.4 295 37.3
VMungo1383G3248 Vigna mungo HOM05D001363 ORTHO05D006255 2.6e-36 156.0 284 38.7
Medtr2g445230 Medicago truncatula HOM05D001363 ORTHO05D006255 5.7e-36 154.8 286 37.1
vmacro06016 Vaccinium macrocarpon HOM05D001363 ORTHO05D006255 9.8e-36 154.1 288 36.5
Aqoxy2G00910 Aquilegia oxysepala HOM05D001363 ORTHO05D006255 1.3e-35 153.7 294 35.7
Cpa.g.sc95.51 Carica papaya HOM05D001363 ORTHO05D006255 1.3e-35 153.7 300 36.3
Atru.chr7.643 Acer truncatum HOM05D001363 ORTHO05D006255 4.9e-35 151.8 295 35.9
Gohir.A05G004600 Gossypium hirsutum HOM05D001363 ORTHO05D006255 8.3e-35 151.0 295 35.6
CsaV3_2G008370 Cucumis sativus L. HOM05D001363 ORTHO05D006255 1.1e-34 150.6 295 36.9
Gorai.009G005300 Gossypium raimondii HOM05D001363 ORTHO05D006255 1.4e-34 150.2 295 35.6
MELO3C004027.2 Cucumis melo HOM05D001363 ORTHO05D006255 1.8e-34 149.8 293 36.5
MBI14_g17365_MAGBIO Magnolia biondii HOM05D001363 ORTHO05D006255 1.8e-34 149.8 290 35.5
MD14G1172600 Malus domestica HOM05D001363 ORTHO05D006255 1.8e-34 149.8 128 60.2
Phvul.008G013800 Phaseolus vulgaris HOM05D001363 ORTHO05D006255 1.8e-34 149.8 284 37.7
CSS0019343 Camellia sinensis var. sinensis HOM05D001363 ORTHO05D006255 2.4e-34 149.4 129 62.8
RcHm_v2.0_Chr4g0402491 Rosa chinensis HOM05D001363 ORTHO05D006255 2.4e-34 149.4 127 61.4
Glyma.18G288200 Glycine max HOM05D001363 ORTHO05D006255 3.1e-34 149.1 288 36.8
Sc08g0005330 Simmondsia chinensis HOM05D001363 ORTHO05D006255 3.1e-34 149.1 298 33.9
ClCG11G012170 Citrullus lanatus HOM05D001363 ORTHO05D006255 5.4e-34 148.3 131 63.4
MD06G1167000 Malus domestica HOM05D001363 ORTHO05D006255 5.4e-34 148.3 128 58.6
PGR142G0790 Punica granatum HOM05D001363 ORTHO05D006255 9.2e-34 147.5 132 58.3
HanXRQChr05g0143031 Helianthus annuus HOM05D001363 ORTHO05D006255 1.2e-33 147.1 131 56.5
TWI34G1409 Tripterygium wilfordii HOM05D001363 ORTHO05D006255 1.2e-33 147.1 296 35.5
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 1.6e-33 146.7 130 56.2
ECA236G4924 Erigeron canadensis HOM05D001363 ORTHO05D006255 1.6e-33 146.7 300 34.3
Lsat_1_v5_gn_8_66820 Lactuca sativa HOM05D001363 ORTHO05D006255 2.0e-33 146.4 299 35.1
Potri.018G093100 Populus trichocarpa HOM05D001363 ORTHO05D006255 2.7e-33 146.0 283 35.7
CANSAT11G0841 Cannabis sativa HOM05D001363 ORTHO05D006255 3.5e-33 145.6 280 36.8
FvH4_4g08251 Fragaria vesca HOM05D001363 ORTHO05D006255 3.5e-33 145.6 119 63.9
Gohir.D05G005500 Gossypium hirsutum HOM05D001363 ORTHO05D006255 7.8e-33 144.4 295 34.9
Ciclev10008928m.g Citrus clementina HOM05D001363 ORTHO05D006255 5.0e-32 141.7 298 35.9
AUR62034263 Chenopodium quinoa HOM05D001363 ORTHO05D006255 6.6e-32 141.4 128 55.5
EL10Ac4g08144 Beta vulgaris HOM05D001363 ORTHO05D006255 8.6e-32 141.0 131 55.0
Dinv41718 Davidia involucrata HOM05D001694 ORTHO05D000248 2.5e-31 139.4 288 35.8
Sed0007175 Sechium edule HOM05D001363 ORTHO05D006255 4.3e-31 138.7 130 60.0
BcaB01g04460 Brassica carinata HOM05D001363 ORTHO05D006255 5.6e-31 138.3 127 57.5
A03p12830 Brassica napus HOM05D001363 ORTHO05D006255 7.3e-31 137.9 135 53.3
BraA03t10591Z Brassica rapa HOM05D001363 ORTHO05D006255 7.3e-31 137.9 135 53.3
BolC3t13941H Brassica oleracea HOM05D001363 ORTHO05D006255 1.6e-30 136.7 131 55.0
FAN07G0609 Fragaria x ananassa HOM05D001363 ORTHO05D006255 2.8e-30 136.0 109 65.1
Carub.0008s1796 Capsella rubella HOM05D001363 ORTHO05D006255 4.7e-30 135.2 131 55.0
PGSC0003DMG400020439 Solanum tuberosum HOM05D001363 ORTHO05D006255 4.7e-30 135.2 290 34.1
TPR.G9532 Trifolium pratense HOM05D001363 ORTHO05D006255 4.7e-30 135.2 119 61.3
Cc06_g13270 Coffea canephora HOM05D001363 ORTHO05D006255 1.0e-29 134.0 276 34.4
C03p14990 Brassica napus HOM05D001363 ORTHO05D006255 1.8e-29 133.3 130 54.6
Thhalv10015458m.g Eutrema salsugineum HOM05D001363 ORTHO05D006255 1.8e-29 133.3 128 53.1
BcaC01g06488 Brassica carinata HOM05D001363 ORTHO05D006255 3.1e-29 132.5 131 54.2
DCAR_014703 Daucus carota HOM05D001363 ORTHO05D006255 3.1e-29 132.5 287 34.1
Aa31LG3G13330 Aethionema arabicum HOM05D001363 ORTHO05D006255 8.9e-29 131.0 130 50.8
Sp6g19160 Schrenkiella parvula HOM05D001363 ORTHO05D006255 8.9e-29 131.0 130 53.1
Actinidia38636 Actinidia chinensis HOM05D001363 ORTHO05D006255 1.5e-28 130.2 119 60.5
AT5G57450 Arabidopsis thaliana HOM05D001363 ORTHO05D006255 3.4e-28 129.0 131 49.6
Oeu056514.1 Olea europaea HOM05D001363 ORTHO05D006255 4.4e-28 128.6 124 56.5
ATR0580G043 Amborella trichopoda HOM05D001363 ORTHO05D006255 7.5e-28 127.9 298 30.5
Eucgr.C00157 Eucalyptus grandis HOM05D001363 ORTHO05D006255 9.8e-28 127.5 291 33.3
SGA_v2.0_scaffold66G22453 Striga asiatica HOM05D001363 ORTHO05D006255 1.3e-27 127.1 125 52.8
CARHR271240 Cardamine hirsuta HOM05D001363 ORTHO05D006255 1.7e-27 126.7 131 51.1
Migut.J01476 Erythranthe guttata HOM05D001363 ORTHO05D006255 2.9e-27 125.9 131 50.4
Solyc07g055170.1 Solanum lycopersicum HOM05D001363 ORTHO05D006255 4.9e-27 125.2 288 33.3
HPP92_010750 Vanilla planifolia HOM05D001363 ORTHO05D006255 6.4e-27 124.8 278 32.4
MSTRG.19704 Avicennia marina HOM05D001363 ORTHO05D006255 1.9e-26 123.2 282 31.6
Os02g0562100 Oryza sativa ssp. japonica HOM05D001363 ORTHO05D006255 2.4e-26 122.9 119 54.6
Zm00001eb243950 Zea mays HOM05D001363 ORTHO05D006255 5.4e-26 121.7 123 54.5
CAN.G1081.7 Capsicum annuum HOM05D001363 ORTHO05D006255 2.7e-25 119.4 127 53.5
PSO339G0974 Papaver somniferum HOM05D000001 ORTHO05D006255 3.5e-25 119.0 260 33.1
THA.LOC104813524 Tarenaya hassleriana HOM05D001363 ORTHO05D006255 8.6e-24 114.4 81 69.1
Sabra18G0080300 Salix brachista HOM05D001363 ORTHO05D006255 3.3e-23 112.5 241 32.8
PSO801G0379 Papaver somniferum HOM05D001363 ORTHO05D006255 5.6e-23 111.7 254 32.3
unitig_0.g574 Utricularia gibba HOM05D001363 ORTHO05D006255 7.3e-23 111.3 122 47.5
Hund26352 Selenicereus undatus HOM05D001363 ORTHO05D006255 1.6e-22 110.2 255 31.8
CBR_g28512 Chara braunii HOM05D001363 ORTHO05D006255 2.1e-22 109.8 129 44.2
Peaxi162Scf00276g00065 Petunia axillaris HOM05D001363 ORTHO05D006255 4.7e-22 108.6 248 32.7
Peaxi162Scf00113g00112 Petunia axillaris HOM05D001363 ORTHO05D006255 3.1e-21 105.9 251 32.7
Sopen07g027050 Solanum pennellii HOM05D000134 ORTHO05D003318 3.1e-21 105.9 273 31.9
SEGI_22217 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.8e-21 104.8 147 39.5
BcaC01g06495 Brassica carinata HOM05D001363 ORTHO05D006255 2.0e-20 103.2 77 64.9
Mapoly0009s0225 Marchantia polymorpha HOM05D001363 ORTHO05D006255 5.8e-20 101.7 124 45.2
SalBow7G1126 Salvia bowleyana HOM05D001363 ORTHO05D006255 1.7e-19 100.1 149 44.3
SHI41748 Sapria himalayana HOM05D001363 ORTHO05D006255 3.7e-19 99.0 78 64.1
Cre06.g278151 Chlamydomonas reinhardtii HOM05D001363 ORTHO05D006255 3.2e-18 95.9 131 44.3
SalBow6G0285 Salvia bowleyana HOM05D001363 ORTHO05D006255 1.2e-17 94.0 106 50.9
SalBow1G6812 Salvia bowleyana HOM05D001363 ORTHO05D006255 2.7e-17 92.8 123 44.7
EL10Ac3g06993 Beta vulgaris HOM05D014025 ORTHO05D006255 3.9e-16 89.0 163 30.7
SalBow3G2957 Salvia bowleyana HOM05D001363 ORTHO05D006255 3.9e-16 89.0 131 42.0
Oeu002544.1 Olea europaea HOM05D001363 ORTHO05D006255 2.5e-15 86.3 77 61.0
SalBow3G3288 Salvia bowleyana HOM05D001363 ORTHO05D006255 5.6e-15 85.1 131 41.2
SalBow3G2802 Salvia bowleyana HOM05D001363 ORTHO05D006255 1.4e-13 80.5 133 36.1
EL10Ac4g08159 Beta vulgaris HOM05D001363 ORTHO05D006255 2.0e-12 76.6 118 41.5
MCO13G404 Micromonas commoda HOM05D001363 ORTHO05D006255 2.0e-12 76.6 154 32.5
PRCOL_00002213 Prasinoderma coloniale HOM05D001363 ORTHO05D006255 2.6e-12 76.3 135 38.5
EL10Ac8g19301 Beta vulgaris HOM05D001363 ORTHO05D006255 3.4e-12 75.9 129 35.7
EL10Ac4g09496 Beta vulgaris HOM05D001363 ORTHO05D006255 2.9e-11 72.8 115 36.5
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 8.3e-11 71.2 53 56.6
EL10Ac9g22685 Beta vulgaris HOM05D014025 ORTHO05D006255 3.2e-10 69.3 116 30.2
EL10Ac1g01702 Beta vulgaris HOM05D001363 ORTHO05D006255 5.4e-10 68.6 115 35.7
EL10Ac7g18135 Beta vulgaris HOM05D014025 ORTHO05D006255 5.4e-10 68.6 111 30.6
EL10Ac1g01763 Beta vulgaris HOM05D001363 ORTHO05D006255 9.2e-10 67.8 105 36.2
BcaC01g06492 Brassica carinata HOM05D001363 ORTHO05D006255 9.2e-10 67.8 234 26.9
Prupe.1G061700 Prunus persica HOM05D001363 ORTHO05D006255 9.2e-10 67.8 217 27.6
EL10Ac7g15946 Beta vulgaris HOM05D014025 ORTHO05D006255 2.7e-09 66.2 116 30.2
SalBow8G0534 Salvia bowleyana HOM05D001363 ORTHO05D006255 2.7e-09 66.2 176 28.4
SMO270G0051 Selaginella moellendorffii HOM05D027465 ORTHO05D006255 6.0e-09 65.1 53 58.5
EL10As3g23308 Beta vulgaris HOM05D001363 ORTHO05D006255 7.8e-09 64.7 121 34.7
VMungo1080G0746 Vigna mungo HOM05D001363 ORTHO05D006255 1.3e-08 63.9 55 54.5
EL10Ac2g02973 Beta vulgaris HOM05D008320 ORTHO05D012961 2.3e-08 63.2 91 38.5
Manes.01G004910 Manihot esculenta HOM05D001363 ORTHO05D006255 8.6e-08 61.2 49 59.2
VMungo1309G0399 Vigna mungo HOM05D001363 ORTHO05D006255 4.7e-06 55.5 44 54.5
EL10Ac9g22649 Beta vulgaris HOM05D001363 ORTHO05D006255 6.2e-06 55.1 126 27.8
EL10Ac4g08201 Beta vulgaris HOM05D001363 ORTHO05D006255 8.1e-06 54.7 126 26.2


User provided reference genes

Program Settings