Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 0.0e+00 1701.8 887 100.0
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 0.0e+00 1194.1 887 72.8
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 0.0e+00 1191.0 889 73.7
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 0.0e+00 1190.3 887 73.6
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 0.0e+00 1177.9 887 72.4
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 0.0e+00 1163.3 887 72.0
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 0.0e+00 1155.2 887 71.1
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 0.0e+00 1139.0 888 71.1
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 0.0e+00 1132.1 928 68.3
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 0.0e+00 1126.3 869 70.8
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 0.0e+00 1124.4 887 70.0
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 0.0e+00 1120.9 887 69.7
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 0.0e+00 1081.2 887 68.5
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 8.7e-301 1036.9 892 66.3
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 4.5e-297 1024.6 855 66.7
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 6.0e-294 1014.2 867 64.0
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 7.4e-284 980.7 896 62.4
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 6.7e-277 957.6 865 61.8
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 1.1e-276 956.8 890 60.4
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 7.4e-276 954.1 1013 56.2
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 4.8e-275 951.4 889 59.2
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 1.2e-273 946.8 899 59.7
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.0e-273 946.0 889 59.4
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.7e-272 943.0 891 59.6
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 1.9e-271 939.5 896 59.8
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.4e-269 933.3 891 59.1
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 2.5e-268 929.1 857 58.9
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 4.3e-268 928.3 894 58.8
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.0e-265 919.5 862 59.5
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 2.6e-265 919.1 882 58.4
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.7e-264 916.4 891 57.4
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 5.0e-264 914.8 886 58.0
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.5e-263 911.4 891 58.2
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.7e-262 909.1 891 57.8
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 2.3e-261 906.0 862 58.7
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 3.3e-260 902.1 866 58.3
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 2.2e-259 899.4 893 58.0
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 2.8e-259 899.0 891 57.1
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 7.0e-258 894.4 888 57.7
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.0e-256 888.3 862 58.5
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.5e-256 887.9 893 56.4
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 8.5e-256 887.5 891 56.3
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 3.2e-255 885.6 893 56.3
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.2e-254 883.6 894 55.9
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 8.0e-254 880.9 889 56.4
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 3.0e-253 879.0 866 57.3
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 9.7e-252 874.0 869 55.5
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 6.3e-251 871.3 882 56.1
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 1.2e-249 867.1 883 55.6
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 5.9e-249 864.8 893 56.6
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.7e-248 863.2 874 55.6
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 2.2e-248 862.8 874 55.5
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.7e-246 855.9 874 55.4
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 8.8e-245 850.9 892 54.3
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 7.5e-244 847.8 877 54.6
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 9.7e-244 847.4 747 61.4
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.0e-240 837.4 877 53.9
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 6.5e-240 834.7 867 54.1
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 1.2e-238 830.5 982 50.0
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.7e-238 829.3 891 53.3
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 1.7e-235 820.1 885 54.4
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 7.2e-231 804.7 889 54.2
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 7.8e-225 784.6 831 53.9
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 4.3e-223 778.9 896 51.8
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 2.1e-222 776.5 896 51.7
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.3e-221 773.1 895 51.8
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 8.3e-219 764.6 895 50.2
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 4.1e-218 762.3 884 50.9
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 6.6e-216 755.0 876 51.6
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.1e-215 754.2 917 50.1
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.1e-215 754.2 892 50.7
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 5.6e-215 751.9 876 51.4
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.2e-214 750.7 895 49.6
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.2e-214 750.7 886 50.5
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 2.8e-214 749.6 866 50.6
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 6.2e-214 748.4 900 49.4
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 1.8e-213 746.9 877 51.4
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 5.2e-213 745.3 1011 46.3
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 6.8e-213 745.0 890 49.6
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 8.9e-213 744.6 866 50.0
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 5.8e-212 741.9 869 50.7
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 1.4e-210 737.3 890 48.8
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 4.1e-210 735.7 651 61.9
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 5.4e-210 735.3 892 50.3
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 7.1e-210 734.9 884 50.9
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.5e-207 727.2 880 49.5
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.5e-207 726.5 894 49.6
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 5.2e-205 718.8 874 49.5
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 3.4e-204 716.1 891 48.5
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 4.1e-202 709.1 892 48.0
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 3.3e-199 699.5 890 47.0
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.2e-198 697.6 885 48.8
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 5.2e-197 692.2 888 49.0
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 4.4e-196 689.1 904 48.1
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 3.2e-194 682.9 889 48.8
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 9.3e-194 681.4 881 48.2
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 2.7e-193 679.9 738 53.3
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 3.0e-192 676.4 882 47.6
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 8.7e-192 674.9 889 46.8
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.5e-191 673.3 659 58.0
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 6.2e-190 668.7 888 47.2
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 6.2e-190 668.7 887 46.7
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 1.1e-189 667.9 881 46.5
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 1.8e-189 667.2 889 46.1
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 2.6e-188 663.3 878 46.7
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.2e-185 654.4 652 56.0
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.6e-185 654.1 893 45.7
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.1e-185 653.7 888 46.8
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 3.5e-185 652.9 871 47.4
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.3e-184 650.2 652 55.5
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 6.6e-184 648.7 599 60.8
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.1e-183 647.9 747 51.7
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 4.3e-183 646.0 707 54.0
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 4.3e-183 646.0 886 46.2
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 3.6e-182 642.9 887 46.9
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 3.4e-180 636.3 950 44.1
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 4.5e-180 636.0 876 46.9
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 3.8e-179 632.9 887 45.3
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 1.3e-176 624.4 879 44.1
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 3.3e-175 619.8 876 46.0
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 9.6e-175 618.2 650 55.1
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 1.1e-173 614.8 889 43.8
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 3.8e-171 606.3 875 44.3
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 3.0e-168 596.7 857 43.8
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 5.1e-168 595.9 896 43.5
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 5.7e-167 592.4 883 42.9
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 4.2e-162 576.2 873 41.9
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 4.2e-162 576.2 877 43.0
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 2.7e-161 573.5 651 51.3
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 3.3e-159 566.6 868 41.8
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 7.4e-159 565.5 645 52.2
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 4.2e-154 549.7 880 40.9
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 9.1e-149 531.9 652 48.9
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.3e-147 528.1 906 40.2
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 4.0e-136 490.0 878 40.5
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 1.6e-132 478.0 932 38.1
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 2.3e-128 464.2 929 36.6
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 1.1e-125 455.3 818 40.2
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 4.5e-124 449.9 590 48.0
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 2.9e-123 447.2 590 48.1
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.2e-121 441.8 582 46.6
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 8.0e-121 439.1 684 43.7
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 2.0e-116 424.5 868 35.7
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 5.7e-111 406.4 821 35.9
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.2e-108 398.7 853 35.1
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.3e-107 394.4 440 50.9
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.2e-105 388.7 862 34.3
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 7.8e-92 342.8 468 45.3
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 4.6e-68 263.8 465 41.5
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 2.5e-66 258.1 822 30.3
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-56 225.3 782 29.2
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.9e-50 205.3 194 57.2
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 9.0e-48 196.4 359 40.1
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 2.0e-47 195.3 394 37.1
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 9.7e-42 176.4 307 41.4
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.2e-41 175.3 161 55.9
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.2e-39 169.5 322 39.1
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.0e-39 168.7 122 66.4
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 3.4e-39 167.9 267 41.9
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.4e-35 156.0 306 37.9
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 5.1e-35 154.1 239 42.3
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 5.1e-35 154.1 179 53.1
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 3.7e-33 147.9 238 40.8
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 6.5e-30 137.1 144 52.8
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 3.0e-27 128.3 145 49.7
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.1e-26 126.3 236 36.0
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.0e-22 113.2 152 42.1
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 6.5e-22 110.5 148 41.2
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 4.1e-16 91.3 111 51.4
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.3e-16 90.9 143 39.2
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 1.3e-14 86.3 142 38.7
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 2.2e-14 85.5 103 46.6
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 5.5e-13 80.9 182 33.0
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 9.4e-13 80.1 89 48.3
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 9.4e-13 80.1 187 35.3
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.1e-12 79.0 133 47.4
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 2.3e-11 75.5 101 47.5
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 4.0e-11 74.7 149 33.6
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 2.0e-10 72.4 101 46.5
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 2.4e-08 65.5 85 41.2
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 3.1e-08 65.1 44 63.6


User provided reference genes

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